RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 TALDO1P37837 337 aa11.77□□□□□ -0.53
RNF4-208ENST00000507247 MNDAP41218 407 aa11.77□□□□□ -0.53
RNF4-208ENST00000507247 RSBN1Q5VWQ0 802 aaPredicted RBP11.77□□□□□ -0.53
RNF4-208ENST00000507247 MFSD4AQ8N468 514 aa11.77□□□□□ -0.53
RNF4-208ENST00000507247 TPRX1Q8N7U7 411 aa11.77□□□□□ -0.53
RNF4-208ENST00000507247 WFDC11Q8NEX6 87 aa11.77□□□□□ -0.53
RNF4-208ENST00000507247 OR4M2Q8NGB6 313 aa11.77□□□□□ -0.53
RNF4-208ENST00000507247 OR8B3Q8NGG8 313 aa11.77□□□□□ -0.53
RNF4-208ENST00000507247 OR8B2Q96RD0 313 aa11.77□□□□□ -0.53
RNF4-208ENST00000507247 HDHD3Q9BSH5 251 aaPredicted RBP11.77□□□□□ -0.53
RNF4-208ENST00000507247 FAM234AQ9H0X4 552 aa11.77□□□□□ -0.53
RNF4-208ENST00000507247 AUNIPQ9H7T9 357 aa11.77□□□□□ -0.53
RNF4-208ENST00000507247 AKIP1Q9NQ31 210 aa11.77□□□□□ -0.53
RNF4-208ENST00000507247 ETAA1Q9NY74 926 aa11.77□□□□□ -0.53
RNF4-208ENST00000507247 MRPS7Q9Y2R9 242 aaKnown RBP11.77□□□□□ -0.53
RNF4-208ENST00000507247 OTOGQ6ZRI0 2925 aa11.76□□□□□ -0.53
RNF4-208ENST00000507247 ARHGAP32A7KAX9 2087 aa11.76□□□□□ -0.53
RNF4-208ENST00000507247 FABP12A6NFH5 140 aa11.76□□□□□ -0.53
RNF4-208ENST00000507247 H3BUI4 141 aa11.76□□□□□ -0.53
RNF4-208ENST00000507247 MGST3O14880 152 aa11.76□□□□□ -0.53
RNF4-208ENST00000507247 MELTFP08582 738 aa11.76□□□□□ -0.53
RNF4-208ENST00000507247 NDUFB7P17568 137 aa11.76□□□□□ -0.53
RNF4-208ENST00000507247 ETV6P41212 452 aa11.76□□□□□ -0.53
RNF4-208ENST00000507247 GUCA2AQ02747 115 aa11.76□□□□□ -0.53
RNF4-208ENST00000507247 AESQ08117 197 aa11.76□□□□□ -0.53
RNF4-208ENST00000507247 IL18Q14116 193 aa11.76□□□□□ -0.53
RNF4-208ENST00000507247 RBM39Q14498 530 aaKnown RBP11.76□□□□□ -0.53
RNF4-208ENST00000507247 EDDM3AQ14507 147 aa11.76□□□□□ -0.53
RNF4-208ENST00000507247 ZNF79Q15937 498 aa11.76□□□□□ -0.53
RNF4-208ENST00000507247 LRRC10Q5BKY1 277 aa11.76□□□□□ -0.53
RNF4-208ENST00000507247 WDR25Q64LD2 544 aaPredicted RBP11.76□□□□□ -0.53
RNF4-208ENST00000507247 FAM131AQ6UXB0 335 aa11.76□□□□□ -0.53
RNF4-208ENST00000507247 Q6ZPA2 131 aa11.76□□□□□ -0.53
RNF4-208ENST00000507247 LINC00299Q6ZSB3 139 aa11.76□□□□□ -0.53
RNF4-208ENST00000507247 NLRC3Q7RTR2 1065 aa11.76□□□□□ -0.53
RNF4-208ENST00000507247 SNX29P2Q8IUI4 249 aa11.76□□□□□ -0.53
RNF4-208ENST00000507247 PPP1R35Q8TAP8 253 aa11.76□□□□□ -0.53
RNF4-208ENST00000507247 NUDCD2Q8WVJ2 157 aa11.76□□□□□ -0.53
RNF4-208ENST00000507247 ABHD1Q96SE0 405 aa11.76□□□□□ -0.53
RNF4-208ENST00000507247 ITGB1BP2Q9UKP3 347 aa11.76□□□□□ -0.53
RNF4-208ENST00000507247 MEIOCA2RUB1 952 aa11.75□□□□□ -0.53
RNF4-208ENST00000507247 SERPINE3A8MV23 424 aa11.75□□□□□ -0.53
RNF4-208ENST00000507247 SSX5O60225 188 aa11.75□□□□□ -0.53
RNF4-208ENST00000507247 GLIPR1P48060 266 aa11.75□□□□□ -0.53
RNF4-208ENST00000507247 KCNJ3P48549 501 aa11.75□□□□□ -0.53
RNF4-208ENST00000507247 PAX5Q02548 391 aa11.75□□□□□ -0.53
RNF4-208ENST00000507247 ARL6IP1Q15041 203 aa11.75□□□□□ -0.53
RNF4-208ENST00000507247 PNLIPRP3Q17RR3 467 aa11.75□□□□□ -0.53
RNF4-208ENST00000507247 KRBOX4Q5JUW0 171 aa11.75□□□□□ -0.53
RNF4-208ENST00000507247 HACD4Q5VWC8 232 aa11.75□□□□□ -0.53
RNF4-208ENST00000507247 BAIAP2L2Q6UXY1 529 aa11.75□□□□□ -0.53
RNF4-208ENST00000507247 ZNF497Q6ZNH5 498 aa11.75□□□□□ -0.53
RNF4-208ENST00000507247 GDPD3Q7L5L3 318 aa11.75□□□□□ -0.53
RNF4-208ENST00000507247 GAPTQ8N292 157 aa11.75□□□□□ -0.53
RNF4-208ENST00000507247 OR5D13Q8NGL4 314 aa11.75□□□□□ -0.53
RNF4-208ENST00000507247 CMSS1Q9BQ75 279 aaKnown RBP11.75□□□□□ -0.53
RNF4-208ENST00000507247 KIF25Q9UIL4 384 aa11.75□□□□□ -0.53
RNF4-208ENST00000507247 KIAA2026Q5HYC2 2103 aa11.75□□□□□ -0.53
RNF4-208ENST00000507247 MALRD1Q5VYJ5 2156 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 KIAA1324LA8MWY0 1029 aaPredicted RBP11.74□□□□□ -0.53
RNF4-208ENST00000507247 FAM157AC9JC47 383 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 RNF223E7ERA6 249 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 PHF1O43189 567 aaPredicted RBP11.74□□□□□ -0.53
RNF4-208ENST00000507247 CA11O75493 328 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 TPPPO94811 219 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 NAPSAO96009 420 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 INHBBP09529 407 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 CD3GP09693 182 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 USF1P22415 310 aaPredicted RBP11.74□□□□□ -0.53
RNF4-208ENST00000507247 ERP29P30040 261 aaKnown RBP11.74□□□□□ -0.53
RNF4-208ENST00000507247 P2RX3P56373 397 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 EDDM3BP56851 147 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 GNG2P59768 71 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 GNB2P62879 340 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 LSAMPQ13449 338 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 ARFRP1Q13795 201 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 ESCO2Q56NI9 601 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 RNASE12Q5GAN4 147 aaKnown RBP11.74□□□□□ -0.53
RNF4-208ENST00000507247 SPANXN2Q5MJ10 180 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 SLC35E4Q6ICL7 350 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 PYHIN1Q6K0P9 492 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 TCF23Q7RTU1 214 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 MRPL30Q8TCC3 161 aaKnown RBP11.74□□□□□ -0.53
RNF4-208ENST00000507247 RAB39BQ96DA2 213 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 DCTN5Q9BTE1 182 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 SSBP3Q9BWW4 388 aaPredicted RBP11.74□□□□□ -0.53
RNF4-208ENST00000507247 REG4Q9BYZ8 158 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 C19orf12Q9NSK7 152 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 CLN8Q9UBY8 286 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 TACC2O95359 2948 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 AKAP9Q99996 3911 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 ABCA2Q9BZC7 2435 aa11.74□□□□□ -0.53
RNF4-208ENST00000507247 TRAV39A0A0B4J263 110 aa11.73□□□□□ -0.53
RNF4-208ENST00000507247 TMEM30CPA0ZSE6 113 aa11.73□□□□□ -0.53
RNF4-208ENST00000507247 ODAMA1E959 279 aa11.73□□□□□ -0.53
RNF4-208ENST00000507247 MEX3AA1L020 520 aaKnown RBP11.73□□□□□ -0.53
RNF4-208ENST00000507247 MEIS3P1A6NDR6 274 aa11.73□□□□□ -0.53
RNF4-208ENST00000507247 A8MXK9 166 aa11.73□□□□□ -0.53
RNF4-208ENST00000507247 C22orf46C9J442 243 aa11.73□□□□□ -0.53
RNF4-208ENST00000507247 MT-ND4P03905 459 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms