RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 P4HTMQ9NXG6 502 aa14.78□□□□□ -0.04
SQSTM1-211ENST00000506690 XKRY2A2RUG3 117 aa14.77□□□□□ -0.04
SQSTM1-211ENST00000506690 ZFP92A6NM28 416 aa14.77□□□□□ -0.04
SQSTM1-211ENST00000506690 ADAM20O43506 726 aa14.77□□□□□ -0.04
SQSTM1-211ENST00000506690 PPYP01298 95 aa14.77□□□□□ -0.04
SQSTM1-211ENST00000506690 FASLGP48023 281 aa14.77□□□□□ -0.04
SQSTM1-211ENST00000506690 IL24Q13007 206 aa14.77□□□□□ -0.04
SQSTM1-211ENST00000506690 BRICD5Q6PL45 260 aa14.77□□□□□ -0.04
SQSTM1-211ENST00000506690 Q6ZPA2 131 aa14.77□□□□□ -0.04
SQSTM1-211ENST00000506690 ZNF695Q8IW36 515 aa14.77□□□□□ -0.04
SQSTM1-211ENST00000506690 C17orf78Q8N4C9 275 aa14.77□□□□□ -0.04
SQSTM1-211ENST00000506690 LRRC61Q9BV99 259 aa14.77□□□□□ -0.04
SQSTM1-211ENST00000506690 ZNF665Q9H7R5 613 aa14.77□□□□□ -0.04
SQSTM1-211ENST00000506690 GPR173Q9NS66 373 aa14.77□□□□□ -0.04
SQSTM1-211ENST00000506690 C10orf142B7Z368 130 aa14.77□□□□□ -0.05
SQSTM1-211ENST00000506690 IGHV4-34P06331 123 aa14.77□□□□□ -0.05
SQSTM1-211ENST00000506690 CD55P08174 381 aa14.77□□□□□ -0.05
SQSTM1-211ENST00000506690 CLN3Q13286 438 aa14.77□□□□□ -0.05
SQSTM1-211ENST00000506690 NKAIN1Q4KMZ8 207 aa14.77□□□□□ -0.05
SQSTM1-211ENST00000506690 SLC25A53Q5H9E4 307 aa14.77□□□□□ -0.05
SQSTM1-211ENST00000506690 PLPPR1Q8TBJ4 325 aa14.77□□□□□ -0.05
SQSTM1-211ENST00000506690 POC1BQ8TC44 478 aa14.77□□□□□ -0.05
SQSTM1-211ENST00000506690 SPSB1Q96BD6 273 aa14.77□□□□□ -0.05
SQSTM1-211ENST00000506690 MRGPRX4Q96LA9 322 aa14.77□□□□□ -0.05
SQSTM1-211ENST00000506690 CLEC1BQ9P126 229 aa14.77□□□□□ -0.05
SQSTM1-211ENST00000506690 LRFN1Q9P244 771 aa14.77□□□□□ -0.05
SQSTM1-211ENST00000506690 IGKV1-27A0A075B6S5 117 aa14.76□□□□□ -0.05
SQSTM1-211ENST00000506690 GNRHRP30968 328 aa14.76□□□□□ -0.05
SQSTM1-211ENST00000506690 OTX1P32242 354 aaPredicted RBP14.76□□□□□ -0.05
SQSTM1-211ENST00000506690 NMSQ5H8A3 153 aa14.76□□□□□ -0.05
SQSTM1-211ENST00000506690 ASCL4Q6XD76 172 aa14.76□□□□□ -0.05
SQSTM1-211ENST00000506690 TGIF2LYQ8IUE0 185 aa14.76□□□□□ -0.05
SQSTM1-211ENST00000506690 GJC3Q8NFK1 279 aa14.76□□□□□ -0.05
SQSTM1-211ENST00000506690 ACY3Q96HD9 319 aa14.76□□□□□ -0.05
SQSTM1-211ENST00000506690 UBE2J1Q9Y385 318 aaPredicted RBP14.76□□□□□ -0.05
SQSTM1-211ENST00000506690 OPN1LWP04000 364 aa14.76□□□□□ -0.05
SQSTM1-211ENST00000506690 THEGLP0DJG4 465 aa14.76□□□□□ -0.05
SQSTM1-211ENST00000506690 PAX9P55771 341 aa14.76□□□□□ -0.05
SQSTM1-211ENST00000506690 P2RY6Q15077 328 aa14.76□□□□□ -0.05
SQSTM1-211ENST00000506690 ZNF787Q6DD87 383 aa14.76□□□□□ -0.05
SQSTM1-211ENST00000506690 TBC1D26Q86UD7 250 aa14.76□□□□□ -0.05
SQSTM1-211ENST00000506690 THNSL2Q86YJ6 484 aa14.76□□□□□ -0.05
SQSTM1-211ENST00000506690 OR2V1Q8NHB1 315 aa14.76□□□□□ -0.05
SQSTM1-211ENST00000506690 MBD3L1Q8WWY6 194 aa14.76□□□□□ -0.05
SQSTM1-211ENST00000506690 OXGR1Q96P68 337 aa14.76□□□□□ -0.05
SQSTM1-211ENST00000506690 PLSCR2Q9NRY7 297 aa14.76□□□□□ -0.05
SQSTM1-211ENST00000506690 RPRMQ9NS64 109 aa14.76□□□□□ -0.05
SQSTM1-211ENST00000506690 GPR27Q9NS67 375 aa14.76□□□□□ -0.05
SQSTM1-211ENST00000506690 RNF115Q9Y4L5 304 aa14.76□□□□□ -0.05
SQSTM1-211ENST00000506690 CHST1O43916 411 aa14.75□□□□□ -0.05
SQSTM1-211ENST00000506690 G0S2P27469 103 aa14.75□□□□□ -0.05
SQSTM1-211ENST00000506690 NPBWR2P48146 333 aa14.75□□□□□ -0.05
SQSTM1-211ENST00000506690 OR8B8Q15620 311 aa14.75□□□□□ -0.05
SQSTM1-211ENST00000506690 PLPPR5Q32ZL2 321 aa14.75□□□□□ -0.05
SQSTM1-211ENST00000506690 WDR25Q64LD2 544 aaPredicted RBP14.75□□□□□ -0.05
SQSTM1-211ENST00000506690 GAB2Q9UQC2 676 aa14.75□□□□□ -0.05
SQSTM1-211ENST00000506690 A0A1W2PNR3 127 aa14.75□□□□□ -0.05
SQSTM1-211ENST00000506690 LILRA5A6NI73 299 aa14.75□□□□□ -0.05
SQSTM1-211ENST00000506690 JMJD7P0C870 316 aa14.75□□□□□ -0.05
SQSTM1-211ENST00000506690 MSR1P21757 451 aa14.75□□□□□ -0.05
SQSTM1-211ENST00000506690 ENDOGQ14249 297 aaKnown RBP14.75□□□□□ -0.05
SQSTM1-211ENST00000506690 RSPO4Q2I0M5 234 aaPredicted RBP14.75□□□□□ -0.05
SQSTM1-211ENST00000506690 PIGYQ3MUY2 71 aa14.75□□□□□ -0.05
SQSTM1-211ENST00000506690 CYB5R2Q6BCY4 276 aa14.75□□□□□ -0.05
SQSTM1-211ENST00000506690 TMEM92Q6UXU6 159 aa14.75□□□□□ -0.05
SQSTM1-211ENST00000506690 DUXBA0A1W2PPF3 345 aa14.74□□□□□ -0.05
SQSTM1-211ENST00000506690 CCDC85CA6NKD9 419 aa14.74□□□□□ -0.05
SQSTM1-211ENST00000506690 OR4A8P0C604 315 aa14.74□□□□□ -0.05
SQSTM1-211ENST00000506690 RAB4AP20338 218 aa14.74□□□□□ -0.05
SQSTM1-211ENST00000506690 FBLP22087 321 aaKnown RBP14.74□□□□□ -0.05
SQSTM1-211ENST00000506690 ZNF41P51814 821 aaPredicted RBP14.74□□□□□ -0.05
SQSTM1-211ENST00000506690 PAX5Q02548 391 aa14.74□□□□□ -0.05
SQSTM1-211ENST00000506690 ZNF726P1Q15940 193 aa14.74□□□□□ -0.05
SQSTM1-211ENST00000506690 R3HDM4Q96D70 268 aa14.74□□□□□ -0.05
SQSTM1-211ENST00000506690 RALGAPA1Q6GYQ0 2036 aa14.74□□□□□ -0.05
SQSTM1-211ENST00000506690 CCDC163A0A0D9SF12 145 aa14.74□□□□□ -0.05
SQSTM1-211ENST00000506690 HIST1H3AP68431 136 aa14.74□□□□□ -0.05
SQSTM1-211ENST00000506690 SNAI3Q3KNW1 292 aa14.74□□□□□ -0.05
SQSTM1-211ENST00000506690 CENPVQ7Z7K6 275 aaPredicted RBP14.74□□□□□ -0.05
SQSTM1-211ENST00000506690 GPR137CQ8N3F9 429 aa14.74□□□□□ -0.05
SQSTM1-211ENST00000506690 OR51G1Q8NGK1 321 aa14.74□□□□□ -0.05
SQSTM1-211ENST00000506690 RNF138Q8WVD3 245 aa14.74□□□□□ -0.05
SQSTM1-211ENST00000506690 TMEM170AQ8WVE7 144 aa14.74□□□□□ -0.05
SQSTM1-211ENST00000506690 ZNF845Q96IR2 970 aaPredicted RBP14.74□□□□□ -0.05
SQSTM1-211ENST00000506690 M0R135 149 aa14.73□□□□□ -0.05
SQSTM1-211ENST00000506690 M0R143 59 aa14.73□□□□□ -0.05
SQSTM1-211ENST00000506690 GZMHP20718 246 aa14.73□□□□□ -0.05
SQSTM1-211ENST00000506690 VDAC1P21796 283 aa14.73□□□□□ -0.05
SQSTM1-211ENST00000506690 BLKP51451 505 aa14.73□□□□□ -0.05
SQSTM1-211ENST00000506690 NUBP1P53384 320 aa14.73□□□□□ -0.05
SQSTM1-211ENST00000506690 IQCJQ1A5X6 159 aa14.73□□□□□ -0.05
SQSTM1-211ENST00000506690 TMEM211Q6ICI0 200 aa14.73□□□□□ -0.05
SQSTM1-211ENST00000506690 ZNF66Q6ZN08 573 aa14.73□□□□□ -0.05
SQSTM1-211ENST00000506690 C16orf82Q7Z2V1 217 aa14.73□□□□□ -0.05
SQSTM1-211ENST00000506690 ZNF799Q96GE5 643 aa14.73□□□□□ -0.05
SQSTM1-211ENST00000506690 AGMATQ9BSE5 352 aa14.73□□□□□ -0.05
SQSTM1-211ENST00000506690 LAMP3Q9UQV4 416 aa14.73□□□□□ -0.05
SQSTM1-211ENST00000506690 IGKV1-12A0A0C4DH73 117 aa14.73□□□□□ -0.05
SQSTM1-211ENST00000506690 OR2J2O76002 312 aa14.73□□□□□ -0.05
SQSTM1-211ENST00000506690 IGKV1D-12P01611 117 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms