RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 VPS13CQ709C8 3753 aa6.03□□□□□ -1.44
NUP54-204ENST00000506098 CSMD2Q7Z408 3487 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 IGKV1D-17A0A075B6S4 117 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 RFPL4AA6NLU0 287 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 CLDN25C9JDP6 229 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 RFPL4AL1F8VTS6 287 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 CTDSPLO15194 276 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 CA11O75493 328 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 LY6HO94772 140 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 HAND1O96004 215 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 DHFRP00374 187 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 MELTFP08582 738 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 CSF3P09919 207 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 TRAPPC2P0DI81 140 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 TRAPPC2BP0DI82 140 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 ATF4P18848 351 aaPredicted RBP6.02□□□□□ -1.45
NUP54-204ENST00000506098 AMY2BP19961 511 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 FUT3P21217 361 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 DNASE1P24855 282 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 CDK2P24941 298 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 CHATP28329 748 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 BLVRBP30043 206 aaPredicted RBP6.02□□□□□ -1.45
NUP54-204ENST00000506098 CD80P33681 288 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 RCVRNP35243 200 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 RBMXP38159 391 aaKnown RBP6.02□□□□□ -1.45
NUP54-204ENST00000506098 NR4A2P43354 598 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 PITPNBP48739 271 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 PDLIM4P50479 330 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 BTG1P62324 171 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 HOXA4Q00056 320 aaPredicted RBP6.02□□□□□ -1.45
NUP54-204ENST00000506098 PAX5Q02548 391 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 ARL6IP1Q15041 203 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 TAF9Q16594 264 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 MICBQ29980 383 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 MOGAT2Q3SYC2 334 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 ZNF260Q3ZCT1 412 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 TMEM155Q4W5P6 130 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 PLAC9Q5JTB6 97 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 SAPCD1Q5SSQ6 148 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 FAM201AQ5SY85 155 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 CNIH2Q6PI25 160 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 BAIAP2L2Q6UXY1 529 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 ZNF788Q6ZQV5 615 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 Q6ZTK2 550 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 BATF2Q8N1L9 274 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 CD177Q8N6Q3 437 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 CHST4Q8NCG5 386 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 OR4M1Q8NGD0 313 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 CAPSLQ8WWF8 208 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 SEH1LQ96EE3 360 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 SDSLQ96GA7 329 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 DIRAS2Q96HU8 199 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 SPACA1Q9HBV2 294 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 AKIP1Q9NQ31 210 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 NUDT15Q9NV35 164 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 DNAJB11Q9UBS4 358 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 AUP1Q9Y679 476 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 BAHCC1Q9P281 2608 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 UNC79Q9P2D8 2635 aa6.02□□□□□ -1.45
NUP54-204ENST00000506098 TRAV24A0A0B4J272 114 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 FABP12A6NFH5 140 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 VWC2LB2RUY7 222 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 SLC33A1O00400 549 aaPredicted RBP6.01□□□□□ -1.45
NUP54-204ENST00000506098 MFNGO00587 321 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 DEGS1O15121 323 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 PDCD6O75340 191 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 ZNF737O75373 536 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 OR7C1O76099 320 aaPredicted RBP6.01□□□□□ -1.45
NUP54-204ENST00000506098 OR2H2O95918 312 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 HLA-DQB1P01920 261 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 CSN2P05814 226 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 GSTP1P09211 210 aaKnown RBP6.01□□□□□ -1.45
NUP54-204ENST00000506098 GABRR1P24046 479 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 PRDX2P32119 198 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 MDH2P40926 338 aaKnown RBP6.01□□□□□ -1.45
NUP54-204ENST00000506098 ATP5J2P56134 94 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 DSCR9P59020 149 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 SPCS3P61009 180 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 ZNF45Q02386 682 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 COL10A1Q03692 680 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 ZNF846Q147U1 533 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 ZMYND11Q15326 602 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 PNLIPRP3Q17RR3 467 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 DEFB113Q30KQ7 82 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 PXDC1Q5TGL8 231 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 SFRP4Q6FHJ7 346 aaPredicted RBP6.01□□□□□ -1.45
NUP54-204ENST00000506098 PYHIN1Q6K0P9 492 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 LIN54Q6MZP7 749 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 C17orf107Q6ZR85 190 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 C1orf122Q6ZSJ8 110 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 PEG10Q86TG7 708 aaKnown RBP6.01□□□□□ -1.45
NUP54-204ENST00000506098 GAPTQ8N292 157 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 MUC20Q8N307 709 aaPredicted RBP6.01□□□□□ -1.45
NUP54-204ENST00000506098 MFSD4AQ8N468 514 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 ZNF561Q8N587 486 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 BOLLQ8N9W6 283 aaKnown RBP6.01□□□□□ -1.45
NUP54-204ENST00000506098 C19orf18Q8NEA5 215 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 OR4D10Q8NGI6 311 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 LRRC20Q8TCA0 184 aa6.01□□□□□ -1.45
NUP54-204ENST00000506098 C15orf40Q8WUR7 153 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms