RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 CAPZBP47756 277 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 ZXDAP98168 799 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 PMP22Q01453 160 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 SNAI3Q3KNW1 292 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 ZNF787Q6DD87 383 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 SSX7Q7RTT5 188 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 C16orf82Q7Z2V1 217 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 GPR137CQ8N3F9 429 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 M1APQ8TC57 530 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 ZNF721Q8TF20 911 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 ZNF837Q96EG3 531 aaPredicted RBP6.61□□□□□ -1.35
NEDD9-208ENST00000504387 SMIM7Q9BQ49 75 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 TMEM204Q9BSN7 226 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 NDUFAF3Q9BU61 184 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 RPRMQ9NS64 109 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 PAM16Q9Y3D7 125 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 GRIFINA4D1Z8 144 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 VSTM2BA6NLU5 285 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 EFNA2O43921 213 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 ZNF43P17038 809 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 GZMHP20718 246 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 DRD1P21728 446 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 LMO1P25800 156 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 IGFBP7Q16270 282 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 ARHGEF39Q8N4T4 335 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 OR10A7Q8NGE5 316 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 OR1P1Q8NH06 330 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 CLDND2Q8NHS1 167 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 DTD1Q8TEA8 209 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 IL1F10Q8WWZ1 152 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 FSCN3Q9NQT6 498 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 FGF21Q9NSA1 209 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 NECAP2Q9NVZ3 263 aa6.61□□□□□ -1.35
NEDD9-208ENST00000504387 TRAV34A0A0B4J273 112 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 TRBV11-1A0A0K0K1C0 115 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 ALG1L2C9J202 215 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 IGHV3-9P01782 118 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 CEACAM1P13688 526 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 CD38P28907 300 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 TRA2AQ13595 282 aaKnown RBP eCLIP6.6□□□□□ -1.35
NEDD9-208ENST00000504387 ZNF266Q14584 549 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 OR8G2PQ6IF36 304 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 Q6ZVH6 145 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 ERASQ7Z444 233 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 TMEM256Q8N2U0 113 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 KDF1Q8NAX2 398 aaPredicted RBP6.6□□□□□ -1.35
NEDD9-208ENST00000504387 LFNGQ8NES3 379 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 OR1L3Q8NH93 324 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 C2orf88Q9BSF0 95 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 RBKSQ9H477 322 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 C3orf85A0A1B0GTC6 90 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 PGPEP1LA6NFU8 196 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 FRG2CA6NGY1 282 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 PPP5D1E7EU14 171 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 TCF21O43680 179 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 NPIPB7O75200 414 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 LCATP04180 440 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 ZNF41P51814 821 aaPredicted RBP6.6□□□□□ -1.35
NEDD9-208ENST00000504387 TGFBR3Q03167 851 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 JOSD1Q15040 202 aaPredicted RBP6.6□□□□□ -1.35
NEDD9-208ENST00000504387 C9orf135Q5VTT2 229 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 TBC1D26Q86UD7 250 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 PIGCQ92535 297 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 HLA-CQ95604 372 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 MSI2Q96DH6 328 aaKnown RBP6.6□□□□□ -1.35
NEDD9-208ENST00000504387 SLC7A10Q9NS82 523 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 KIAA1456Q9P272 454 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 SEMA5BQ9P283 1151 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 ERRFI1Q9UJM3 462 aaPredicted RBP6.6□□□□□ -1.35
NEDD9-208ENST00000504387 PITPNC1Q9UKF7 332 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 ST3GAL6Q9Y274 331 aa6.6□□□□□ -1.35
NEDD9-208ENST00000504387 C5orf67F2Z3F1 127 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 DFFBO76075 338 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 COL8A2P25067 703 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 CARD18P57730 90 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 HERPUD1Q15011 391 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 TCF23Q7RTU1 214 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 SGCZQ96LD1 299 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 SLC25A22Q9H936 323 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 TUBG2Q9NRH3 451 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 PLSCR2Q9NRY7 297 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 GOLT1BQ9Y3E0 138 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 ELOA3CA0A087WX78 387 aaPredicted RBP6.59□□□□□ -1.35
NEDD9-208ENST00000504387 SERPINE3A8MV23 424 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 TGOLN2O43493 480 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 NUPR1O60356 82 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 SPINK4O60575 86 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 IGHG1P01857 330 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 CRYAAP02489 173 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 SELEP16581 610 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 UBE2G2P60604 165 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 TLE4Q04727 773 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 OR5I1Q13606 314 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 SPINK9Q5DT21 86 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 FAM90A2PQ658T7 463 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 DOK3Q7L591 496 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 GAPTQ8N292 157 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 D2HGDHQ8N465 521 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 SYT3Q9BQG1 590 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 OR51B6Q9H340 312 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms