RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 SLC25A39Q9BZJ4 359 aaPredicted RBP3.67□□□□□ -1.82
NIPBL-203ENST00000503274 OR11A1Q9GZK7 315 aa3.67□□□□□ -1.82
NIPBL-203ENST00000503274 RAB1BQ9H0U4 201 aa3.67□□□□□ -1.82
NIPBL-203ENST00000503274 SLC38A1Q9H2H9 487 aa3.67□□□□□ -1.82
NIPBL-203ENST00000503274 TPT1P8Q9HAU6 139 aa3.67□□□□□ -1.82
NIPBL-203ENST00000503274 SLC17A5Q9NRA2 495 aa3.67□□□□□ -1.82
NIPBL-203ENST00000503274 GNG12Q9UBI6 72 aa3.67□□□□□ -1.82
NIPBL-203ENST00000503274 A0A0G2JRQ6 117 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 TMEM120BA0PK00 339 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 PRORSD1PA6NEY8 169 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 CLDN24A6NM45 220 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 EVPLLA8MZ36 301 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 AIM2O14862 343 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 POLR3GO15318 223 aaPredicted RBP3.66□□□□□ -1.82
NIPBL-203ENST00000503274 NPIPB7O75200 414 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 ZNF780AO75290 641 aaPredicted RBP3.66□□□□□ -1.82
NIPBL-203ENST00000503274 ERLIN1O75477 346 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 SERPINB7O75635 380 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 MFN2O95140 757 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 BCHEP06276 602 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 GKN3PP0CG01 181 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 PNMTP11086 282 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 ETS2P15036 469 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 ZNF32P17041 273 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 PCMT1P22061 227 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 RPS4Y1P22090 263 aaKnown RBP3.66□□□□□ -1.82
NIPBL-203ENST00000503274 HNRNPA3P51991 378 aaKnown RBP3.66□□□□□ -1.82
NIPBL-203ENST00000503274 POLR2JP52435 117 aaKnown RBP3.66□□□□□ -1.82
NIPBL-203ENST00000503274 SLC18A1P54219 525 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 NCALDP61601 193 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 FUT5Q11128 374 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 FADDQ13158 208 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 ARFRP1Q13795 201 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 TMEM249Q2WGJ8 235 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 C6orf52Q5T4I8 152 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 TSPO2Q5TGU0 170 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 C9orf135Q5VTT2 229 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 C1orf140Q5VVS0 124 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 C11orf71Q6IPW1 123 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 ACOT7LQ6ZUV0 252 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 OLIG3Q7RTU3 272 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 HMGN2P46Q86SG4 172 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 WDR31Q8NA23 367 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 MFSD8Q8NHS3 518 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 MAGEE2Q8TD90 523 aaPredicted RBP3.66□□□□□ -1.82
NIPBL-203ENST00000503274 SLC38A4Q969I6 547 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 AURKBQ96GD4 344 aaPredicted RBP3.66□□□□□ -1.82
NIPBL-203ENST00000503274 C4orf36Q96KX1 117 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 OXGR1Q96P68 337 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 SLC38A2Q96QD8 506 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 ZNF607Q96SK3 696 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 SORT1Q99523 831 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 GAL3ST1Q99999 423 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 C20orf27Q9GZN8 174 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 WDR55Q9H6Y2 383 aaPredicted RBP3.66□□□□□ -1.82
NIPBL-203ENST00000503274 C12orf10Q9HB07 376 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 TMEM27Q9HBJ8 222 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 ZNF443Q9Y2A4 671 aaPredicted RBP3.66□□□□□ -1.82
NIPBL-203ENST00000503274 CACNG2Q9Y698 323 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 SVEP1Q4LDE5 3571 aa3.66□□□□□ -1.82
NIPBL-203ENST00000503274 ARFGEF3Q5TH69 2177 aa3.65□□□□□ -1.82
NIPBL-203ENST00000503274 TRAV36DV7A0A075B6V5 113 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 ARPC4-TTLL3A0A0A6YYG9 625 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 LOC102725191A0A1B0GVB3 256 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 ZNF726A6NNF4 738 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 ATP6V1G2-DDX39BF2Z307 99 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 RPL36A-HNRNPH2H7BZ11 118 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 TRAF3IP2O43734 574 aaPredicted RBP3.65□□□□□ -1.83
NIPBL-203ENST00000503274 SNNO75324 88 aaPredicted RBP3.65□□□□□ -1.83
NIPBL-203ENST00000503274 BCAS1O75363 584 aaPredicted RBP3.65□□□□□ -1.83
NIPBL-203ENST00000503274 LGI1O95970 557 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 H2BFMP0C1H6 154 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 OR4A8P0C604 315 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 NQO1P15559 274 aaKnown RBP3.65□□□□□ -1.83
NIPBL-203ENST00000503274 NPR2P20594 1047 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 PTNP21246 168 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 COX7A1P24310 79 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 IL12AP29459 219 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 ARR3P36575 388 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 ACAA2P42765 397 aaKnown RBP3.65□□□□□ -1.83
NIPBL-203ENST00000503274 CDKN2CP42773 168 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 RPS5P46782 204 aaKnown RBP3.65□□□□□ -1.83
NIPBL-203ENST00000503274 BNIP2Q12982 314 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 GGTLC2Q14390 218 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 ARL6IP1Q15041 203 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 RGNQ15493 299 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 HIKESHIQ53FT3 197 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 TNFAIP8L3Q5GJ75 292 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 PAGE3Q5JUK9 113 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 C1orf146Q5VVC0 180 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 REEP3Q6NUK4 255 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 ULK3Q6PHR2 472 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 ZNF836Q6ZNA1 936 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 ZNF573Q86YE8 665 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 ZIC4Q8N9L1 334 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 OR10A7Q8NGE5 316 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 OR56B4Q8NH76 319 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 C10orf105Q8TEF2 133 aa3.65□□□□□ -1.83
NIPBL-203ENST00000503274 SRSF12Q8WXF0 261 aaKnown RBP3.65□□□□□ -1.83
NIPBL-203ENST00000503274 RDH5Q92781 318 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms