RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 TMEM222Q9H0R3 208 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 FAM212BQ9NTI7 297 aaPredicted RBP8.44□□□□□ -1.06
CLIP1-204ENST00000501271 FAM86C1Q9NVL1 165 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 POMT1Q9Y6A1 747 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 IGKV1-6A0A0C4DH72 117 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 ZNF724A8MTY0 619 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 TRDCB7Z8K6 153 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 NME2P1O60361 137 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 DANCRP0C864 163 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 SPP1P10451 314 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 ASCL1P50553 236 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 DVL1P1P54792 670 aaPredicted RBP8.44□□□□□ -1.06
CLIP1-204ENST00000501271 PLGLB1Q02325 96 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 MIDNQ504T8 468 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 SPIN3Q5JUX0 258 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 MED12LQ86YW9 2145 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 GAPTQ8N292 157 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 SUMF1Q8NBK3 374 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 KIRREL1Q96J84 757 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 ZNF488Q96MN9 340 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 GPR87Q9BY21 358 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 C11orf1Q9H5F2 150 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 ZFP57Q9NU63 452 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 IL17BQ9UHF5 180 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 LIPGQ9Y5X9 500 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 BORCS7-ASMTA0A0B4J1R7 106 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 SLC22A20A6NK97 555 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 C21orf140B9A014 251 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 TRAPPC2LH3BP13 241 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 H7C2Y5 167 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 C1QL1O75973 258 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 TK1P04183 234 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 SEC11BP0C7V7 166 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 ZNF616Q08AN1 781 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 MPV17LQ2QL34 196 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 FAM185AQ8N0U4 392 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 HSD17B11Q8NBQ5 300 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 NEK7Q8TDX7 302 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 BOD1Q96IK1 185 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 AKR1E2Q96JD6 320 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 OR51B6Q9H340 312 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 ABI3Q9P2A4 366 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 PRSS50Q9UI38 385 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 PRELID3BQ9Y3B1 194 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 CD300LBA8K4G0 201 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 PRKACAP17612 351 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 WNT5AP41221 380 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 EWSR1Q01844 656 aaKnown RBP eCLIP8.43□□□□□ -1.06
CLIP1-204ENST00000501271 IGFBP7Q16270 282 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 SRSF7Q16629 238 aaKnown RBP eCLIP8.43□□□□□ -1.06
CLIP1-204ENST00000501271 HIKESHIQ53FT3 197 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 C20orf204Q6ZNR8 217 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 LILRB1Q8NHL6 650 aaPredicted RBP8.43□□□□□ -1.06
CLIP1-204ENST00000501271 TMEM56Q96MV1 263 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 SCRT1Q9BWW7 348 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 C12orf49Q9H741 205 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 UBE2J1Q9Y385 318 aaPredicted RBP8.43□□□□□ -1.06
CLIP1-204ENST00000501271 TMEM56-RWDD3S4R434 201 aa8.43□□□□□ -1.06
CLIP1-204ENST00000501271 MED19A0JLT2 244 aaPredicted RBP8.42□□□□□ -1.06
CLIP1-204ENST00000501271 HSD17B6O14756 317 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 NDUFA2O43678 99 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 TUSC2O75896 110 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 CDS2O95674 445 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 TSPAN15O95858 294 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 CD59P13987 128 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 ARR3P36575 388 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 SNCAP37840 140 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 MEOX1P50221 254 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 PPT1P50897 306 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 RND3P61587 244 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 POLR2GP62487 172 aaKnown RBP eCLIP8.42□□□□□ -1.06
CLIP1-204ENST00000501271 SRPXP78539 464 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 GNMTQ14749 295 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 FAM76BQ5HYJ3 339 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 ETV3LQ6ZN32 361 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 ZNF695Q8IW36 515 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 MKXQ8IYA7 352 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 SELENOHQ8IZQ5 122 aaKnown RBP8.42□□□□□ -1.06
CLIP1-204ENST00000501271 ZNF565Q8N9K5 539 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 SUMF2Q8NBJ7 301 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 OR5A2Q8NGI9 324 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 MRPL30Q8TCC3 161 aaKnown RBP8.42□□□□□ -1.06
CLIP1-204ENST00000501271 OR5P3Q8WZ94 311 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 SAV1Q9H4B6 383 aaPredicted RBP8.42□□□□□ -1.06
CLIP1-204ENST00000501271 RNF122Q9H9V4 155 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 IGSF23A1L1A6 192 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 FAM24AA6NFZ4 105 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 ADAM20O43506 726 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 IL32P24001 234 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 CAMLGP49069 296 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 RNPS1Q15287 305 aaKnown RBP8.42□□□□□ -1.06
CLIP1-204ENST00000501271 TMEM164Q5U3C3 297 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 C17orf78Q8N4C9 275 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 OR2C3Q8N628 320 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 MAGT1Q9H0U3 335 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 CCL28Q9NRJ3 127 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 LUZP4Q9P127 313 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 CACFD1Q9UGQ2 172 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 MLXQ9UH92 298 aa8.42□□□□□ -1.06
CLIP1-204ENST00000501271 RFNGQ9Y644 331 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms