RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 PQLC2LA1A4F0 135 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 FAM90A10PA6NDY2 464 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 FAM90A18PA6NE21 464 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 FAM90A16PA6NEW6 464 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 FAM90A20PA6NIJ5 464 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 FAM90A8PA6NJQ4 464 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 FAM90A7PA6NKC0 464 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 TMEM210A6NLX4 147 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 FAM90A22PA8MWA6 464 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 FAM90A12PA8MX19 464 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 FAM90A5PA8MXJ8 464 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 FAM90A23PA8MXZ1 464 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 INAFM1C9JVW0 142 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 INMT-MINDY4F8WBC2 141 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 TRAPPC2LH3BP13 241 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 CCL21O00585 134 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 SPRY1O43609 319 aaPredicted RBP4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 TIMM8AO60220 97 aaPredicted RBP4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 CA11O75493 328 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 RBMXL2O75526 392 aaKnown RBP4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 IGLV2-14P01704 120 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 C1QBP02746 253 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 FAM90A15PP0C7V4 464 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 FAM90A13PP0C7W8 464 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 FAM90A14PP0C7W9 464 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 FAM90A24PP0C7X0 464 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 AKAIN1P0CW23 69 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 KITLGP21583 273 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 CA6P23280 308 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 PTAFRP25105 342 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 BLVRBP30043 206 aaPredicted RBP4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 SLC6A1P30531 599 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 GLRXP35754 106 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 HAAOP46952 286 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 SRP9P49458 86 aaKnown RBP4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 GZMKP49863 264 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 ASCL1P50553 236 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 ZNF83P51522 516 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 GPM6AP51674 278 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 NKX2-5P52952 324 aaPredicted RBP4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 RAG2P55895 527 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 TMEM50BP56557 158 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 TAS2R19P59542 299 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 SELENOVP59797 346 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 KRTAP10-6P60371 365 aaPredicted RBP4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 BTG1P62324 171 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 BLOC1S1P78537 153 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 ADORA2A-AS1P86434 159 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 NAAAQ02083 359 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 FAM27E3Q08E93 113 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 PSG7Q13046 419 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 ARFRP1Q13795 201 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 KLF9Q13886 244 aaPredicted RBP4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 OR8G1Q15617 311 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 BEAN1Q3B7T3 259 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 PCGF3Q3KNV8 242 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 MOGAT2Q3SYC2 334 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 ESCO2Q56NI9 601 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 DMRTC1Q5HYR2 192 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 SPATA46Q5T0L3 261 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 OLFML2AQ68BL7 652 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 HIST2H2BDQ6DRA6 164 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 RGS7BPQ6MZT1 257 aaPredicted RBP4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 ZNF782Q6ZMW2 699 aaPredicted RBP4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 RNF144BQ7Z419 303 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 C1QL2Q7Z5L3 287 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 TMEM200AQ86VY9 491 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 OSR2Q8N2R0 312 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 ZNF611Q8N823 705 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 BHLHE23Q8NDY6 225 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 TMEM104Q8NE00 496 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 OR8G5Q8NG78 346 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 OR13G1Q8NGZ3 307 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 KLF14Q8TD94 323 aaPredicted RBP4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 OR5P3Q8WZ94 311 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 AQP3Q92482 292 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 CREB3L1Q96BA8 519 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 SEH1LQ96EE3 360 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 MARS2Q96GW9 593 aaKnown RBP4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 NEDD4LQ96PU5 975 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 DMRTA2Q96SC8 542 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 CACNG6Q9BXT2 260 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 PKIBQ9C010 78 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 MMP28Q9H239 520 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 PLK3Q9H4B4 646 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 HRASLSQ9HDD0 168 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 IFT46Q9NQC8 304 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 PURGQ9UJV8 347 aaKnown RBP4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 NUP50Q9UKX7 468 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 POLDIP2Q9Y2S7 368 aa4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 FLNAP21333 2647 aaKnown RBP4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 ANK3Q12955 4377 aaKnown RBP4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 MAP1AP78559 2803 aaPredicted RBP4.49□□□□□ -1.69
HMGXB4-208ENST00000498325 DIDO1Q9BTC0 2240 aaKnown RBP4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 A0A1W2PP11 408 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 LRP5LA4QPB2 252 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 TMEM235A6NFC5 223 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 SERPINE3A8MV23 424 aa4.48□□□□□ -1.69
HMGXB4-208ENST00000498325 DISC1C4P0D8 188 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms