RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 KIR2DS1Q14954 304 aa12.91□□□□□ -0.34
VIM-208ENST00000497849 TP53I3Q53FA7 332 aa12.91□□□□□ -0.34
VIM-208ENST00000497849 TPTE2P1Q5T6R2 138 aa12.91□□□□□ -0.34
VIM-208ENST00000497849 LCNL1Q6ZST4 164 aa12.91□□□□□ -0.34
VIM-208ENST00000497849 RTN4RL2Q86UN3 420 aa12.91□□□□□ -0.34
VIM-208ENST00000497849 ANGPTL5Q86XS5 388 aa12.91□□□□□ -0.34
VIM-208ENST00000497849 ACBD7Q8N6N7 88 aa12.91□□□□□ -0.34
VIM-208ENST00000497849 C5orf56Q8N8D9 126 aa12.91□□□□□ -0.34
VIM-208ENST00000497849 ITFG2Q969R8 447 aa12.91□□□□□ -0.34
VIM-208ENST00000497849 FGF20Q9NP95 211 aaPredicted RBP12.91□□□□□ -0.34
VIM-208ENST00000497849 GPR84Q9NQS5 396 aa12.91□□□□□ -0.34
VIM-208ENST00000497849 GPR173Q9NS66 373 aa12.91□□□□□ -0.34
VIM-208ENST00000497849 FAM206AQ9NX38 181 aa12.91□□□□□ -0.34
VIM-208ENST00000497849 ENPP5Q9UJA9 477 aa12.91□□□□□ -0.34
VIM-208ENST00000497849 TMEM14AQ9Y6G1 99 aa12.91□□□□□ -0.34
VIM-208ENST00000497849 EFCAB10A6NFE3 127 aa12.9□□□□□ -0.34
VIM-208ENST00000497849 LINC01548A6NM66 108 aa12.9□□□□□ -0.34
VIM-208ENST00000497849 RPP14O95059 124 aaKnown RBP12.9□□□□□ -0.34
VIM-208ENST00000497849 FADS2O95864 444 aaKnown RBP12.9□□□□□ -0.34
VIM-208ENST00000497849 GDNFP39905 211 aa12.9□□□□□ -0.34
VIM-208ENST00000497849 ETV1P50549 477 aa12.9□□□□□ -0.34
VIM-208ENST00000497849 RAB40BQ12829 278 aa12.9□□□□□ -0.34
VIM-208ENST00000497849 PRAMEF5Q5TYX0 476 aa12.9□□□□□ -0.34
VIM-208ENST00000497849 TMEM42Q69YG0 159 aa12.9□□□□□ -0.34
VIM-208ENST00000497849 ZNF773Q6PK81 442 aa12.9□□□□□ -0.34
VIM-208ENST00000497849 AHSA2Q719I0 299 aa12.9□□□□□ -0.34
VIM-208ENST00000497849 STPG2Q8N412 459 aa12.9□□□□□ -0.34
VIM-208ENST00000497849 OR51E1Q8TCB6 317 aa12.9□□□□□ -0.34
VIM-208ENST00000497849 ASB17Q8WXJ9 295 aa12.9□□□□□ -0.34
VIM-208ENST00000497849 MNTQ99583 582 aa12.9□□□□□ -0.34
VIM-208ENST00000497849 MRPS26Q9BYN8 205 aaKnown RBP12.9□□□□□ -0.34
VIM-208ENST00000497849 CHST6Q9GZX3 395 aa12.9□□□□□ -0.34
VIM-208ENST00000497849 DUSP21Q9H596 190 aa12.9□□□□□ -0.34
VIM-208ENST00000497849 ZNF286AQ9HBT8 521 aa12.9□□□□□ -0.34
VIM-208ENST00000497849 PAK1IP1Q9NWT1 392 aaPredicted RBP12.9□□□□□ -0.34
VIM-208ENST00000497849 CLEC2DQ9UHP7 191 aa12.9□□□□□ -0.34
VIM-208ENST00000497849 ALMS1Q8TCU4 4167 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 METTL15A6NJ78 407 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 BUB1B-PAK6H3BSN5 160 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 IGHG2P01859 326 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 IGHA1P01876 353 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 FAM106CPP0CH98 169 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 SMIM18P0DKX4 95 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 ROM1Q03395 351 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 ST3GAL4Q11206 333 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 IL24Q13007 206 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 FHL3Q13643 280 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 GRK1Q15835 563 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 HLA-DRB5Q30154 266 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 TEX38Q6PEX7 206 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 COMMD2Q86X83 199 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 THNSL2Q86YJ6 484 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 ZNF679Q8IYX0 411 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 YIPF7Q8N8F6 280 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 ISOC1Q96CN7 298 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 TMEM80Q96HE8 168 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 MROQ9BYG7 248 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 PKIBQ9C010 78 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 ISG20L2Q9H9L3 353 aaKnown RBP12.89□□□□□ -0.35
VIM-208ENST00000497849 FKBP14Q9NWM8 211 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 ERVK13-1Q9NX77 482 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 MTCH1Q9NZJ7 389 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 CNOT2Q9NZN8 540 aaKnown RBP12.89□□□□□ -0.35
VIM-208ENST00000497849 SNX5Q9Y5X3 404 aa12.89□□□□□ -0.35
VIM-208ENST00000497849 TMEM269A0A1B0GVZ9 245 aa12.88□□□□□ -0.35
VIM-208ENST00000497849 IRGMA1A4Y4 181 aa12.88□□□□□ -0.35
VIM-208ENST00000497849 J3QLW9 94 aa12.88□□□□□ -0.35
VIM-208ENST00000497849 RGS10O43665 173 aa12.88□□□□□ -0.35
VIM-208ENST00000497849 PSPNO60542 156 aa12.88□□□□□ -0.35
VIM-208ENST00000497849 MRPS14O60783 128 aaKnown RBP12.88□□□□□ -0.35
VIM-208ENST00000497849 KRT8P05787 483 aa12.88□□□□□ -0.35
VIM-208ENST00000497849 HCKP08631 526 aa12.88□□□□□ -0.35
VIM-208ENST00000497849 LIMS3P0CW19 117 aa12.88□□□□□ -0.35
VIM-208ENST00000497849 LIMS4P0CW20 117 aa12.88□□□□□ -0.35
VIM-208ENST00000497849 ZNF19P17023 458 aa12.88□□□□□ -0.35
VIM-208ENST00000497849 CDK2P24941 298 aa12.88□□□□□ -0.35
VIM-208ENST00000497849 CD34P28906 385 aa12.88□□□□□ -0.35
VIM-208ENST00000497849 C21orf33P30042 268 aaPredicted RBP12.88□□□□□ -0.35
VIM-208ENST00000497849 CEACAM3P40198 252 aa12.88□□□□□ -0.35
VIM-208ENST00000497849 MNDAP41218 407 aa12.88□□□□□ -0.35
VIM-208ENST00000497849 CDX1P47902 265 aaPredicted RBP12.88□□□□□ -0.35
VIM-208ENST00000497849 RIDAP52758 137 aaKnown RBP12.88□□□□□ -0.35
VIM-208ENST00000497849 MFGE8Q08431 387 aaPredicted RBP12.88□□□□□ -0.35
VIM-208ENST00000497849 CLVS2Q5SYC1 327 aa12.88□□□□□ -0.35
VIM-208ENST00000497849 UTF1Q5T230 341 aa12.88□□□□□ -0.35
VIM-208ENST00000497849 OR52W1Q6IF63 320 aa12.88□□□□□ -0.35
VIM-208ENST00000497849 HEPN1Q6WQI6 88 aa12.88□□□□□ -0.35
VIM-208ENST00000497849 SLC35E3Q7Z769 313 aa12.88□□□□□ -0.35
VIM-208ENST00000497849 STX19Q8N4C7 294 aa12.88□□□□□ -0.35
VIM-208ENST00000497849 TM2D3Q9BRN9 247 aa12.88□□□□□ -0.35
VIM-208ENST00000497849 ALG8Q9BVK2 526 aa12.88□□□□□ -0.35
VIM-208ENST00000497849 CCDC90BQ9GZT6 254 aa12.88□□□□□ -0.35
VIM-208ENST00000497849 PBOV1Q9GZY1 135 aa12.88□□□□□ -0.35
VIM-208ENST00000497849 GNG8Q9UK08 70 aa12.88□□□□□ -0.35
VIM-208ENST00000497849 UBE2J1Q9Y385 318 aaPredicted RBP12.88□□□□□ -0.35
VIM-208ENST00000497849 ACOD1A6NK06 481 aa12.87□□□□□ -0.35
VIM-208ENST00000497849 TRIM64CA6NLI5 447 aa12.87□□□□□ -0.35
VIM-208ENST00000497849 OOSP1A8MZH6 123 aa12.87□□□□□ -0.35
VIM-208ENST00000497849 FGF16O43320 207 aa12.87□□□□□ -0.35
VIM-208ENST00000497849 DHRS3O75911 302 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms