RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 A0A0B4J2A0 478 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 LGALS8O00214 317 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 ADH4P08319 380 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 ZNF16P17020 682 aaPredicted RBP7.13□□□□□ -1.27
USP54-215ENST00000497106 ANXA7P20073 488 aaKnown RBP7.13□□□□□ -1.27
USP54-215ENST00000497106 CD300CQ08708 224 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 EDDM3AQ14507 147 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 PRR30Q53SZ7 412 aaPredicted RBP7.13□□□□□ -1.27
USP54-215ENST00000497106 OR52W1Q6IF63 320 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 EIF5AL1Q6IS14 154 aaKnown RBP7.13□□□□□ -1.27
USP54-215ENST00000497106 TCTE3Q8IZS6 198 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 PAQR4Q8N4S7 273 aaPredicted RBP7.13□□□□□ -1.27
USP54-215ENST00000497106 GCSAMQ8N6F7 178 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 UPRTQ96BW1 309 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 NPDC1Q9NQX5 325 aaPredicted RBP7.13□□□□□ -1.27
USP54-215ENST00000497106 SHPKQ9UHJ6 478 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 KCNK7Q9Y2U2 307 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 CPAMD8Q8IZJ3 1885 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 PPIAL4EA0A075B759 164 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 C7orf66A4D0T2 115 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 PPIAL4DF5H284 164 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 PYCARD-AS1I3L0S3 204 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 TSC22D2O75157 780 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 TOXO94900 526 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 SFTPBP07988 381 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 PPIAL4FP0DN26 164 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 PTHLHP12272 177 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 NDUFB7P17568 137 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 PRDX2P32119 198 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 NCMAPQ5T1S8 102 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 ZNF626Q68DY1 528 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 AKR1E2Q96JD6 320 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 PRELID3BQ9Y3B1 194 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 PPIAL4AQ9Y536 164 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 FXYD6-FXYD2A0A087WZ82 144 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 OR2H2O95918 312 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 ERVS71-1P61550 626 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 FCN2Q15485 313 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 AADACL3Q5VUY0 350 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 ASPHD2Q6ICH7 369 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 SLC35E4Q6ICL7 350 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 ZNF561Q8N587 486 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 OR2T35Q8NGX2 323 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 MARCH1Q8TCQ1 289 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 NEU4Q8WWR8 484 aaPredicted RBP7.13□□□□□ -1.27
USP54-215ENST00000497106 FXYD6Q9H0Q3 95 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 DOCK10Q96BY6 2186 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 A0A1W2PP11 408 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 FBXL19-AS1Q494R0 122 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 ACP7Q6ZNF0 438 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 SLC25A42Q86VD7 318 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 MRPL41Q8IXM3 137 aaKnown RBP7.13□□□□□ -1.27
USP54-215ENST00000497106 BATF2Q8N1L9 274 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 SULT4A1Q9BR01 284 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 SEC22CQ9BRL7 303 aa7.13□□□□□ -1.27
USP54-215ENST00000497106 SFT2D2O95562 160 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 AKR1C2P52895 323 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 S100A10P60903 97 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 ST3GAL2Q16842 350 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 PXDC1Q5TGL8 231 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 SEM1Q6ZVN7 128 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 CALHM1Q8IU99 346 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 GVQW1Q8N7I0 195 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 LHFPL5Q8TAF8 219 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 NRIP2Q9BQI9 281 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 FAM234AQ9H0X4 552 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 ZFHX2Q9C0A1 2572 aaPredicted RBP7.12□□□□□ -1.27
USP54-215ENST00000497106 C17orf100A8MU93 164 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 SDCBPO00560 298 aaPredicted RBP7.12□□□□□ -1.27
USP54-215ENST00000497106 SCAF4O95104 1147 aaKnown RBP7.12□□□□□ -1.27
USP54-215ENST00000497106 IFNA7P01567 189 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 C1QBP02746 253 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 KIR2DS2P43631 304 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 UCP3P55916 312 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 ATXN7L3Q14CW9 347 aaPredicted RBP7.12□□□□□ -1.27
USP54-215ENST00000497106 FAAP20Q6NZ36 180 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 C1QL2Q7Z5L3 287 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 RELL2Q8NC24 303 aaPredicted RBP7.12□□□□□ -1.27
USP54-215ENST00000497106 OR2AK2Q8NG84 335 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 MTCH1Q9NZJ7 389 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 DUS4LO95620 317 aaKnown RBP7.12□□□□□ -1.27
USP54-215ENST00000497106 NFYAP23511 347 aaPredicted RBP7.12□□□□□ -1.27
USP54-215ENST00000497106 SLC25A24Q6NUK1 477 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 OR10V1Q8NGI7 309 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 OR13C8Q8NGS7 320 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 LRRC20Q8TCA0 184 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 WDR13Q9H1Z4 485 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 Q9N2K0 584 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 FAM221AA4D161 298 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 DUSP1P28562 367 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 COL10A1Q03692 680 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 SLC9A3R2Q15599 337 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 ESCO2Q56NI9 601 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 PLAC9Q5JTB6 97 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 MUC15Q8N387 334 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 MAFIPQ8WZ33 124 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 H1FXQ92522 213 aaKnown RBP7.12□□□□□ -1.27
USP54-215ENST00000497106 ARL11Q969Q4 196 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 RAB18Q9NP72 206 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 GSKIPQ9P0R6 139 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms