RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 ZNF256Q9Y2P7 627 aaPredicted RBP11.22□□□□□ -0.61
VARS-228ENST00000495010 SIRT4Q9Y6E7 314 aaPredicted RBP11.22□□□□□ -0.61
VARS-228ENST00000495010 IGKV1-9A0A0C4DH69 117 aa11.21□□□□□ -0.61
VARS-228ENST00000495010 A0A1W2PPI3 338 aa11.21□□□□□ -0.61
VARS-228ENST00000495010 A0A1W2PQL4 384 aaPredicted RBP11.21□□□□□ -0.61
VARS-228ENST00000495010 KDM4BO94953 1096 aa11.21□□□□□ -0.61
VARS-228ENST00000495010 C21orf33P30042 268 aaPredicted RBP11.21□□□□□ -0.61
VARS-228ENST00000495010 GPR50Q13585 617 aa11.21□□□□□ -0.61
VARS-228ENST00000495010 KIR2DS1Q14954 304 aa11.21□□□□□ -0.61
VARS-228ENST00000495010 LTC4SQ16873 150 aa11.21□□□□□ -0.61
VARS-228ENST00000495010 TMEM244Q5VVB8 128 aa11.21□□□□□ -0.61
VARS-228ENST00000495010 UTS2BQ765I0 119 aa11.21□□□□□ -0.61
VARS-228ENST00000495010 SPATA24Q86W54 205 aa11.21□□□□□ -0.61
VARS-228ENST00000495010 RDH10Q8IZV5 341 aa11.21□□□□□ -0.61
VARS-228ENST00000495010 PRSS35Q8N3Z0 413 aa11.21□□□□□ -0.61
VARS-228ENST00000495010 OR10X1Q8NGY0 326 aa11.21□□□□□ -0.61
VARS-228ENST00000495010 LEAP2Q969E1 77 aa11.21□□□□□ -0.61
VARS-228ENST00000495010 FGGYQ96C11 551 aa11.21□□□□□ -0.61
VARS-228ENST00000495010 ADAT3Q96EY9 351 aaPredicted RBP11.21□□□□□ -0.61
VARS-228ENST00000495010 NRBF2Q96F24 287 aa11.21□□□□□ -0.61
VARS-228ENST00000495010 COQ2Q96H96 371 aa11.21□□□□□ -0.61
VARS-228ENST00000495010 IDI2-AS1Q9NZ38 188 aa11.21□□□□□ -0.61
VARS-228ENST00000495010 WARS2Q9UGM6 360 aaKnown RBP11.21□□□□□ -0.61
VARS-228ENST00000495010 GNG8Q9UK08 70 aa11.21□□□□□ -0.61
VARS-228ENST00000495010 SMAD5-AS1Q9Y6J3 95 aa11.21□□□□□ -0.61
VARS-228ENST00000495010 MEIKINA0A087WXM9 373 aa11.2□□□□□ -0.62
VARS-228ENST00000495010 SLC33A1O00400 549 aaPredicted RBP11.2□□□□□ -0.62
VARS-228ENST00000495010 RRP9O43818 475 aaKnown RBP11.2□□□□□ -0.62
VARS-228ENST00000495010 CALB2P22676 271 aa11.2□□□□□ -0.62
VARS-228ENST00000495010 CDX1P47902 265 aaPredicted RBP11.2□□□□□ -0.62
VARS-228ENST00000495010 GNG10P50151 68 aa11.2□□□□□ -0.62
VARS-228ENST00000495010 ZNF260Q3ZCT1 412 aa11.2□□□□□ -0.62
VARS-228ENST00000495010 UTF1Q5T230 341 aa11.2□□□□□ -0.62
VARS-228ENST00000495010 MOB3BQ86TA1 216 aa11.2□□□□□ -0.62
VARS-228ENST00000495010 OR5D18Q8NGL1 313 aa11.2□□□□□ -0.62
VARS-228ENST00000495010 THTPAQ9BU02 230 aa11.2□□□□□ -0.62
VARS-228ENST00000495010 PPIL3Q9H2H8 161 aaKnown RBP11.2□□□□□ -0.62
VARS-228ENST00000495010 CALYQ9NYX4 217 aa11.2□□□□□ -0.62
VARS-228ENST00000495010 PSG11Q9UQ72 335 aa11.2□□□□□ -0.62
VARS-228ENST00000495010 IGKV1-12A0A0C4DH73 117 aa11.19□□□□□ -0.62
VARS-228ENST00000495010 LINC01548A6NM66 108 aa11.19□□□□□ -0.62
VARS-228ENST00000495010 HSPB6O14558 160 aa11.19□□□□□ -0.62
VARS-228ENST00000495010 FKBP6O75344 327 aa11.19□□□□□ -0.62
VARS-228ENST00000495010 APOL3O95236 402 aa11.19□□□□□ -0.62
VARS-228ENST00000495010 IGKV1D-12P01611 117 aa11.19□□□□□ -0.62
VARS-228ENST00000495010 ELANEP08246 267 aa11.19□□□□□ -0.62
VARS-228ENST00000495010 LYL1P12980 280 aa11.19□□□□□ -0.62
VARS-228ENST00000495010 GPR12P47775 334 aa11.19□□□□□ -0.62
VARS-228ENST00000495010 DAPP51397 102 aa11.19□□□□□ -0.62
VARS-228ENST00000495010 GNGT1P63211 74 aa11.19□□□□□ -0.62
VARS-228ENST00000495010 FOXE3Q13461 319 aa11.19□□□□□ -0.62
VARS-228ENST00000495010 DIAPH2-AS1Q14236 149 aa11.19□□□□□ -0.62
VARS-228ENST00000495010 Q6P435 159 aa11.19□□□□□ -0.62
VARS-228ENST00000495010 FAHD1Q6P587 224 aa11.19□□□□□ -0.62
VARS-228ENST00000495010 TGIF2LXQ8IUE1 241 aa11.19□□□□□ -0.62
VARS-228ENST00000495010 RCHY1Q96PM5 261 aa11.19□□□□□ -0.62
VARS-228ENST00000495010 SPACA5Q96QH8 159 aa11.19□□□□□ -0.62
VARS-228ENST00000495010 BARHL1Q9BZE3 327 aa11.19□□□□□ -0.62
VARS-228ENST00000495010 LIN7CQ9NUP9 197 aaKnown RBP11.19□□□□□ -0.62
VARS-228ENST00000495010 SCOCQ9UIL1 159 aa11.19□□□□□ -0.62
VARS-228ENST00000495010 H0YJX3 145 aa11.18□□□□□ -0.62
VARS-228ENST00000495010 HSD17B6O14756 317 aa11.18□□□□□ -0.62
VARS-228ENST00000495010 MPZL2O60487 215 aa11.18□□□□□ -0.62
VARS-228ENST00000495010 GAPDHP04406 335 aaKnown RBP11.18□□□□□ -0.62
VARS-228ENST00000495010 TMEM225BP0DP42 221 aa11.18□□□□□ -0.62
VARS-228ENST00000495010 KIR3DL2P43630 455 aa11.18□□□□□ -0.62
VARS-228ENST00000495010 EFNB1P98172 346 aa11.18□□□□□ -0.62
VARS-228ENST00000495010 FLOT2Q14254 428 aa11.18□□□□□ -0.62
VARS-228ENST00000495010 TP53I3Q53FA7 332 aa11.18□□□□□ -0.62
VARS-228ENST00000495010 PAN3Q58A45 887 aaKnown RBP11.18□□□□□ -0.62
VARS-228ENST00000495010 C12orf73Q69YU5 71 aa11.18□□□□□ -0.62
VARS-228ENST00000495010 SAXO1Q8IYX7 474 aa11.18□□□□□ -0.62
VARS-228ENST00000495010 OR13A1Q8NGR1 328 aa11.18□□□□□ -0.62
VARS-228ENST00000495010 OR2T10Q8NGZ9 312 aa11.18□□□□□ -0.62
VARS-228ENST00000495010 RFESDQ8TAC1 157 aa11.18□□□□□ -0.62
VARS-228ENST00000495010 NR1H4Q96RI1 486 aaPredicted RBP11.18□□□□□ -0.62
VARS-228ENST00000495010 RASL11BQ9BPW5 248 aa11.18□□□□□ -0.62
VARS-228ENST00000495010 ABCG5Q9H222 651 aa11.18□□□□□ -0.62
VARS-228ENST00000495010 KIF25Q9UIL4 384 aa11.18□□□□□ -0.62
VARS-228ENST00000495010 ZAR1LA6NP61 321 aa11.17□□□□□ -0.62
VARS-228ENST00000495010 CCRL2O00421 344 aa11.17□□□□□ -0.62
VARS-228ENST00000495010 MITFO75030 526 aaPredicted RBP11.17□□□□□ -0.62
VARS-228ENST00000495010 IL1AP01583 271 aa11.17□□□□□ -0.62
VARS-228ENST00000495010 CGB3P0DN86 165 aa11.17□□□□□ -0.62
VARS-228ENST00000495010 CGB7P0DN87 165 aa11.17□□□□□ -0.62
VARS-228ENST00000495010 DBTP11182 482 aaKnown RBP11.17□□□□□ -0.62
VARS-228ENST00000495010 VDAC1P21796 283 aa11.17□□□□□ -0.62
VARS-228ENST00000495010 HTR1FP30939 366 aa11.17□□□□□ -0.62
VARS-228ENST00000495010 INSL3P51460 131 aa11.17□□□□□ -0.62
VARS-228ENST00000495010 FAM27D1Q5T7N8 215 aa11.17□□□□□ -0.62
VARS-228ENST00000495010 SLC16A12Q6ZSM3 486 aa11.17□□□□□ -0.62
VARS-228ENST00000495010 OR10A7Q8NGE5 316 aa11.17□□□□□ -0.62
VARS-228ENST00000495010 OR51T1Q8NGJ9 327 aa11.17□□□□□ -0.62
VARS-228ENST00000495010 OR13C3Q8NGS6 347 aa11.17□□□□□ -0.62
VARS-228ENST00000495010 OR13C9Q8NGT0 318 aa11.17□□□□□ -0.62
VARS-228ENST00000495010 C4orf3Q8WVX3 66 aa11.17□□□□□ -0.62
VARS-228ENST00000495010 EAF1Q96JC9 268 aaPredicted RBP11.17□□□□□ -0.62
VARS-228ENST00000495010 OSBPL10Q9BXB5 764 aa11.17□□□□□ -0.62
VARS-228ENST00000495010 ZMAT4Q9H898 229 aa11.17□□□□□ -0.62
VARS-228ENST00000495010 ENOPH1Q9UHY7 261 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms