RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 KIAA1456Q9P272 454 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 UBE2J1Q9Y385 318 aaPredicted RBP9.92□□□□□ -0.82
RFC4-214ENST00000494047 MPC1Q9Y5U8 109 aa9.92□□□□□ -0.82
RFC4-214ENST00000494047 A0A087WWC5 75 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 B4DEV8 164 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 ZNF732B4DXR9 585 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 NPIPB11E5RHQ5 1161 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 E9PLN8 166 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 TRAPPC2LH3BP13 241 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 WRBO00258 174 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 GEMIN2O14893 280 aaKnown RBP9.91□□□□□ -0.82
RFC4-214ENST00000494047 OR7C1O76099 320 aaPredicted RBP9.91□□□□□ -0.82
RFC4-214ENST00000494047 OPN1LWP04000 364 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 MMP7P09237 267 aaPredicted RBP9.91□□□□□ -0.82
RFC4-214ENST00000494047 UCP1P25874 307 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 MAS1LP35410 378 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 EIF2S3P41091 472 aaKnown RBP9.91□□□□□ -0.82
RFC4-214ENST00000494047 NPBWR1P48145 328 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 PLP2Q04941 152 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 IL24Q13007 206 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 CLINT1Q14677 625 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 RNPS1Q15287 305 aaKnown RBP9.91□□□□□ -0.82
RFC4-214ENST00000494047 OR2A2Q6IF42 318 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 TMEM88Q6PEY1 159 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 MRPL21Q7Z2W9 205 aaKnown RBP9.91□□□□□ -0.82
RFC4-214ENST00000494047 STX12Q86Y82 276 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 ZNF573Q86YE8 665 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 CBLN2Q8IUK8 224 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 FOXRED2Q8IWF2 684 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 OR5A2Q8NGI9 324 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 OR10G4Q8NGN3 311 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 OR10D3Q8NH80 312 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 RELTQ969Z4 430 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 FAM173AQ9BQD7 235 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 DDA1Q9BW61 102 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 EIF5A2Q9GZV4 153 aaKnown RBP9.91□□□□□ -0.82
RFC4-214ENST00000494047 GP6Q9HCN6 339 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 RAXQ9Y2V3 346 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 NOSIPQ9Y314 301 aaKnown RBP9.91□□□□□ -0.82
RFC4-214ENST00000494047 MMP24Q9Y5R2 645 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 ATP23Q9Y6H3 246 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 AHCTF1Q8WYP5 2266 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 DMXL2Q8TDJ6 3036 aa9.91□□□□□ -0.82
RFC4-214ENST00000494047 TNRC6AQ8NDV7 1962 aaKnown RBP9.91□□□□□ -0.82
RFC4-214ENST00000494047 SPRY1O43609 319 aaPredicted RBP9.9□□□□□ -0.82
RFC4-214ENST00000494047 LY86O95711 162 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 NAPSAO96009 420 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 IFNA17P01571 189 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 CRYBA1P05813 215 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 DBHP09172 617 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 OR8U9P0C7N5 309 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 JMJD7P0C870 316 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 B4GALT1P15291 398 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 APLNRP35414 380 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 MEOX2P50222 304 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 PPT1P50897 306 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 AKR1C2P52895 323 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 UCNP55089 124 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 FXYD4P59646 89 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 EWSR1Q01844 656 aaKnown RBP eCLIP9.9□□□□□ -0.82
RFC4-214ENST00000494047 ZNF92Q03936 586 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 AKR1C1Q04828 323 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 CEACAM21Q3KPI0 293 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 TMEM164Q5U3C3 297 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 LCN10Q6JVE6 187 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 RNF144BQ7Z419 303 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 FAM219AQ8IW50 185 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 RXFP4Q8TDU9 374 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 FAM216AQ8WUB2 273 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 SFT2D1Q8WV19 159 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 MAFIPQ8WZ33 124 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 EXTL1Q92935 676 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 SLAMF9Q96A28 289 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 AKR1E2Q96JD6 320 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 RAB40CQ96S21 281 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 REPIN1Q9BWE0 567 aaKnown RBP9.9□□□□□ -0.82
RFC4-214ENST00000494047 PKIBQ9C010 78 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 Q9N2K0 584 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 ASCL3Q9NQ33 180 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 SIRT7Q9NRC8 400 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 FREM2Q5SZK8 3169 aa9.9□□□□□ -0.82
RFC4-214ENST00000494047 IGKV1-27A0A075B6S5 117 aa9.89□□□□□ -0.83
RFC4-214ENST00000494047 IGKV1D-8A0A087WSZ0 117 aa9.89□□□□□ -0.83
RFC4-214ENST00000494047 IGHV3-15A0A0B4J1V0 119 aa9.89□□□□□ -0.83
RFC4-214ENST00000494047 A0A1B0GU03 582 aa9.89□□□□□ -0.83
RFC4-214ENST00000494047 COLCA2A8K830 154 aa9.89□□□□□ -0.83
RFC4-214ENST00000494047 RNF212BA8MTL3 300 aa9.89□□□□□ -0.83
RFC4-214ENST00000494047 CDRT15L2A8MXV6 281 aa9.89□□□□□ -0.83
RFC4-214ENST00000494047 K7N7A8 449 aa9.89□□□□□ -0.83
RFC4-214ENST00000494047 MSTNO14793 375 aa9.89□□□□□ -0.83
RFC4-214ENST00000494047 ANGPTL7O43827 346 aa9.89□□□□□ -0.83
RFC4-214ENST00000494047 CXCL13O43927 109 aa9.89□□□□□ -0.83
RFC4-214ENST00000494047 TUSC2O75896 110 aa9.89□□□□□ -0.83
RFC4-214ENST00000494047 HSPB1P04792 205 aaKnown RBP9.89□□□□□ -0.83
RFC4-214ENST00000494047 RCC1P18754 421 aaPredicted RBP9.89□□□□□ -0.83
RFC4-214ENST00000494047 LMO1P25800 156 aa9.89□□□□□ -0.83
RFC4-214ENST00000494047 GDF1P27539 372 aa9.89□□□□□ -0.83
RFC4-214ENST00000494047 CD82P27701 267 aa9.89□□□□□ -0.83
RFC4-214ENST00000494047 AKR1D1P51857 326 aa9.89□□□□□ -0.83
RFC4-214ENST00000494047 GFRA1P56159 465 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms