RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 STUMQ69YW2 141 aa6□□□□□ -1.45
VPS13B-205ENST00000493587 THSD4Q6ZMP0 1018 aa6□□□□□ -1.45
VPS13B-205ENST00000493587 GDF7Q7Z4P5 450 aa6□□□□□ -1.45
VPS13B-205ENST00000493587 TCEAL8Q8IYN2 117 aa6□□□□□ -1.45
VPS13B-205ENST00000493587 MTURNQ8N3F0 131 aa6□□□□□ -1.45
VPS13B-205ENST00000493587 TMEM217Q8N7C4 229 aa6□□□□□ -1.45
VPS13B-205ENST00000493587 NPEPL1Q8NDH3 523 aa6□□□□□ -1.45
VPS13B-205ENST00000493587 OR51G1Q8NGK1 321 aa6□□□□□ -1.45
VPS13B-205ENST00000493587 OR10AC1Q8NH08 325 aa6□□□□□ -1.45
VPS13B-205ENST00000493587 RTN4IP1Q8WWV3 396 aaPredicted RBP6□□□□□ -1.45
VPS13B-205ENST00000493587 NEUROD4Q9HD90 331 aa6□□□□□ -1.45
VPS13B-205ENST00000493587 COPS7AQ9UBW8 275 aa6□□□□□ -1.45
VPS13B-205ENST00000493587 ALG1L2C9J202 215 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 IFNA1P01562 189 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 GLI4P10075 376 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 ALOX5APP20292 161 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 PIGPP57054 158 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 PPP1CBP62140 327 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 DECR1Q16698 335 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 ZNF787Q6DD87 383 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 OR5H2Q8NGV7 314 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 PFN4Q8NHR9 129 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 WFDC5Q8TCV5 224 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 DNASE2BQ8WZ79 361 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 OR5P2Q8WZ92 322 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 IGFLR1Q9H665 355 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 GPR27Q9NS67 375 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 MTCH1Q9NZJ7 389 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 RALYQ9UKM9 306 aaKnown RBP5.99□□□□□ -1.45
VPS13B-205ENST00000493587 MMP17Q9ULZ9 603 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 VDAC3Q9Y277 283 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 NSG1A0A0A6YYJ2 146 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 MUC21A0A0G2JKD1 596 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 MUC21A0A140T8X8 626 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 IGLC7A0M8Q6 106 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 SDCBPO00560 298 aaPredicted RBP5.99□□□□□ -1.45
VPS13B-205ENST00000493587 DEDDO75618 318 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 ZGLP1P0C6A0 271 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 USF1P22415 310 aaPredicted RBP5.99□□□□□ -1.45
VPS13B-205ENST00000493587 DNASE1L1P49184 302 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 AESQ08117 197 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 HSD52Q0P140 79 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 MUC21Q5SSG8 566 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 CCDC144NLQ6NUI1 221 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 CFAP52Q8N1V2 620 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 ZNF439Q8NDP4 499 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 OR10G3Q8NGC4 313 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 MRAP2Q96G30 205 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 RSPO3Q9BXY4 272 aaPredicted RBP5.99□□□□□ -1.45
VPS13B-205ENST00000493587 ZNF665Q9H7R5 613 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 RHBDD3Q9Y3P4 386 aa5.99□□□□□ -1.45
VPS13B-205ENST00000493587 DPRXA6NFQ7 191 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 SERINC4A6NH21 518 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 SLC17A2O00624 439 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 AMY2BP19961 511 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 OTX1P32242 354 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-205ENST00000493587 RPS24P62847 133 aaKnown RBP5.98□□□□□ -1.45
VPS13B-205ENST00000493587 SPIN3Q5JUX0 258 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 RNF44Q7L0R7 432 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 TCF23Q7RTU1 214 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 BLNKQ8WV28 456 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 PLD4Q96BZ4 506 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 FGGYQ96C11 551 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 NAA38Q9BRA0 125 aaKnown RBP5.98□□□□□ -1.45
VPS13B-205ENST00000493587 NRN1Q9NPD7 142 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 TMEM140Q9NV12 185 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 TAAR2Q9P1P5 351 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 FBXL7Q9UJT9 491 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 KLHDC2Q9Y2U9 406 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 TSSC4Q9Y5U2 329 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-205ENST00000493587 SCN2AQ99250 2005 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 LRP5LA4QPB2 252 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 TAX1BP3O14907 124 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 ZNF253O75346 499 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 LAMP2P13473 410 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 ZNF43P17038 809 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 CSNK2A2P19784 350 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-205ENST00000493587 PGCP20142 388 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 IL12BP29460 328 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 RUNX1Q01196 453 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 ZNF154Q13106 437 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 AGERQ15109 404 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 METRNLQ641Q3 311 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 DNM1P46Q6ZS02 220 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 LGI3Q8N145 548 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 PNKDQ8N490 385 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 OR51A4Q8NGJ6 313 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 OR5B3Q8NH48 314 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 CLDND2Q8NHS1 167 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 SLC2A12Q8TD20 617 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 RNF128Q8TEB7 428 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 DIO2Q92813 273 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 OR2V2Q96R30 315 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 RASL10BQ96S79 203 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 YAE1D1Q9NRH1 226 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 INSL5Q9Y5Q6 135 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 ARL2-SNX15V9GYD0 113 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 CACNA1IQ9P0X4 2223 aa5.98□□□□□ -1.45
VPS13B-205ENST00000493587 TNRC6BQ9UPQ9 1833 aaKnown RBP5.98□□□□□ -1.45
VPS13B-205ENST00000493587 PPIAL4EA0A075B759 164 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms