RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 FAM90A23PA8MXZ1 464 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 CCRL2O00421 344 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 NDUFB3O43676 98 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 ENSAO43768 121 aaKnown RBP5.53□□□□□ -1.52
VPS52-219ENST00000493379 INMTO95050 263 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 NXPH2O95156 264 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 TNFAIP8O95379 198 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 CYB5AP00167 134 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 TK1P04183 234 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 FAM90A15PP0C7V4 464 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 FAM90A13PP0C7W8 464 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 FAM90A14PP0C7W9 464 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 FAM90A24PP0C7X0 464 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 DUX4L2P0CJ85 424 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 DUX4L3P0CJ86 424 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 DUX4L4P0CJ87 422 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 DUX4L5P0CJ88 424 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 DUX4L6P0CJ89 424 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 DUX4L7P0CJ90 424 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 CGB3P0DN86 165 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 CGB7P0DN87 165 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 BCL3P20749 454 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 PSMD7P51665 324 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 RPS25P62851 125 aaKnown RBP5.53□□□□□ -1.52
VPS52-219ENST00000493379 PPP3R1P63098 170 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 LCN2P80188 198 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 QRFPP83859 136 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 FABP5Q01469 135 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 GPR176Q14439 515 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 IL13RA2Q14627 380 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 INSL4Q14641 139 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 LRRC10Q5BKY1 277 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 DCAF12L2Q5VW00 463 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 DUX4L9Q6RFH8 374 aaPredicted RBP5.53□□□□□ -1.52
VPS52-219ENST00000493379 BTN2A1Q7KYR7 527 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 CEACAM19Q7Z692 300 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 LINC00596Q86U02 117 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 CMTM4Q8IZR5 234 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 FAM216BQ8N7L0 139 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 PNLDC1Q8NA58 520 aaKnown RBP5.53□□□□□ -1.52
VPS52-219ENST00000493379 ZNRF1Q8ND25 227 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 NPRL2Q8WTW4 380 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 CORO2AQ92828 525 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 TNFRSF14Q92956 283 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 SLAMF9Q96A28 289 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 SLC25A28Q96A46 364 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 ORAI1Q96D31 301 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 ZNF488Q96MN9 340 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 SPACA5Q96QH8 159 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 GPHA2Q96T91 129 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 GFI1Q99684 422 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 C1orf43Q9BWL3 253 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 CCDC90BQ9GZT6 254 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 C11orf54Q9H0W9 315 aaPredicted RBP5.53□□□□□ -1.52
VPS52-219ENST00000493379 SIRPDQ9H106 197 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 LINC00574Q9H8X3 128 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 PCDHB16Q9NRJ7 776 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 SNTG1Q9NSN8 517 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 RBFOX1Q9NWB1 397 aaKnown RBP5.53□□□□□ -1.52
VPS52-219ENST00000493379 CKLFQ9UBR5 152 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 DUX4Q9UBX2 424 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 SLC25A10Q9UBX3 287 aaPredicted RBP5.53□□□□□ -1.52
VPS52-219ENST00000493379 OR5V1Q9UGF6 321 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 KPTNQ9Y664 436 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 DOCK11Q5JSL3 2073 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 A0A087WXM4 84 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 PNMA8CA0A1B0GUJ8 204 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 M0R1W7 72 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 SH2D1BO14796 132 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 SLC22A1O15245 554 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 ANGPTL7O43827 346 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 ARL6IP5O75915 188 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 PLATP00750 562 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 RBP4P02753 201 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 GLAP06280 429 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 HCKP08631 526 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 UBBP0CG47 229 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 HSMCR30P0CW71 290 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 TMEM225BP0DP42 221 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 SELLP14151 372 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 RANBP1P43487 201 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 KCNJ3P48549 501 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 DLX6P56179 175 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 MEF2CQ06413 473 aaPredicted RBP5.52□□□□□ -1.53
VPS52-219ENST00000493379 KLF17Q5JT82 389 aaPredicted RBP5.52□□□□□ -1.53
VPS52-219ENST00000493379 FAM209BQ5JX69 171 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 FAM27D1Q5T7N8 215 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 DDI2Q5TDH0 399 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 GLT8D1Q68CQ7 371 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 FAHD2BQ6P2I3 314 aaPredicted RBP5.52□□□□□ -1.53
VPS52-219ENST00000493379 GDPGP1Q6ZNW5 385 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 USP43Q70EL4 1123 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 OR8H2Q8N162 312 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 GAPTQ8N292 157 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 Q8N7P7 452 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 BOLLQ8N9W6 283 aaKnown RBP5.52□□□□□ -1.53
VPS52-219ENST00000493379 TSPAN14Q8NG11 270 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 OR4D6Q8NGJ1 314 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 MUL1Q969V5 352 aa5.52□□□□□ -1.53
VPS52-219ENST00000493379 FAHD2AQ96GK7 314 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms