RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 CST2P09228 141 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 SNRPCP09234 159 aaKnown RBP6.04□□□□□ -1.44
HERC4-211ENST00000492996 PGAM2P15259 253 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 SERPINF1P36955 418 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 GSK3AP49840 483 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 NDUFA6P56556 154 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 NHLH2Q02577 135 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 LBHQ53QV2 105 aaPredicted RBP6.04□□□□□ -1.44
HERC4-211ENST00000492996 ABLIM2Q6H8Q1 611 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 ETV3LQ6ZN32 361 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 MOB3CQ70IA8 216 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 HOGA1Q86XE5 327 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 PRR18Q8N4B5 295 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 ZDHHC22Q8N966 263 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 OR13G1Q8NGZ3 307 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 STOML3Q8TAV4 291 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 FAM57AQ8TBR7 257 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 MITD1Q8WV92 249 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 FAM173AQ9BQD7 235 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 OCSTAMPQ9BR26 566 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 ZNF703Q9H7S9 590 aaPredicted RBP6.04□□□□□ -1.44
HERC4-211ENST00000492996 BCO1Q9HAY6 547 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 C19orf12Q9NSK7 152 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 GAR1Q9NY12 217 aaKnown RBP6.04□□□□□ -1.44
HERC4-211ENST00000492996 PCDHB10Q9UN67 800 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 PHOX2AO14813 284 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 NRASP01111 189 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 GLI4P10075 376 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 PKIAP61925 76 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 TNFRSF9Q07011 255 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 PIGYQ3MUY2 71 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 PLCXD3Q63HM9 321 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 TMEM200AQ86VY9 491 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 FAM89BQ8N5H3 189 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 TMEM251Q8N6I4 163 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 CPEB3Q8NE35 698 aaKnown RBP6.04□□□□□ -1.44
HERC4-211ENST00000492996 OR1S2Q8NGQ3 325 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 ZNF75AQ96N20 296 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 TTTY12Q9BZ98 90 aa6.04□□□□□ -1.44
HERC4-211ENST00000492996 DHRS7CA6NNS2 312 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 OR8U8P0C7N1 319 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 CD79AP11912 226 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 FBXL14Q8N1E6 418 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 BHLHE23Q8NDY6 225 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 TMEM230Q96A57 120 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 DEFB127Q9H1M4 99 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 C12orf49Q9H741 205 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 GSKIPQ9P0R6 139 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 ZFHX2Q9C0A1 2572 aaPredicted RBP6.03□□□□□ -1.44
HERC4-211ENST00000492996 KANTRA0A1W2PQU2 76 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 OR6C6A6NF89 314 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 GEMIN2O14893 280 aaKnown RBP6.03□□□□□ -1.44
HERC4-211ENST00000492996 NKX2-8O15522 239 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 SFTPBP07988 381 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 HOXB5P09067 269 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 TBPP20226 339 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 LHX2P50458 406 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 LUMP51884 338 aaPredicted RBP6.03□□□□□ -1.44
HERC4-211ENST00000492996 FAM3AP98173 230 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 TLE4Q04727 773 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 PNLIPRP3Q17RR3 467 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 DMRTA1Q5VZB9 504 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 C11orf87Q6NUJ2 197 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 UNQ6126/PRO20091Q6UXV3 157 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 DMBX1Q8NFW5 382 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 TOMM40LQ969M1 308 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 CLCC1Q96S66 551 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 METTL8Q9H825 291 aaKnown RBP6.03□□□□□ -1.44
HERC4-211ENST00000492996 MYOZ1Q9NP98 299 aaPredicted RBP6.03□□□□□ -1.44
HERC4-211ENST00000492996 GPR132Q9UNW8 380 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 IGKV1-12A0A0C4DH73 117 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 C5orf49A4QMS7 147 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 ZNF850A8MQ14 1090 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 C3orf80F5H4A9 247 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 SYNGR4O95473 234 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 DUS4LO95620 317 aaKnown RBP6.03□□□□□ -1.44
HERC4-211ENST00000492996 IL2RAP01589 272 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 IGKV1D-12P01611 117 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 RPA2P15927 270 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 CLDN18P56856 261 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 RNF151Q2KHN1 245 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 TMEM128Q5BJH2 165 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 AADACL3Q5VUY0 350 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 ISOC2Q96AB3 205 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 SPACA1Q9HBV2 294 aa6.03□□□□□ -1.44
HERC4-211ENST00000492996 DSPP15924 2871 aaKnown RBP6.02□□□□□ -1.44
HERC4-211ENST00000492996 hCG_1809904A0A1W2PP81 198 aa6.02□□□□□ -1.45
HERC4-211ENST00000492996 A0A1W2PR64 198 aa6.02□□□□□ -1.45
HERC4-211ENST00000492996 A0A1W2PRV1 198 aa6.02□□□□□ -1.45
HERC4-211ENST00000492996 A6NLC8 198 aa6.02□□□□□ -1.45
HERC4-211ENST00000492996 WDR1O75083 606 aa6.02□□□□□ -1.45
HERC4-211ENST00000492996 SNAPC5O75971 98 aa6.02□□□□□ -1.45
HERC4-211ENST00000492996 IFNA10P01566 189 aa6.02□□□□□ -1.45
HERC4-211ENST00000492996 SNRNP70P08621 437 aaKnown RBP6.02□□□□□ -1.45
HERC4-211ENST00000492996 LOXP28300 417 aaPredicted RBP6.02□□□□□ -1.45
HERC4-211ENST00000492996 MPGP29372 298 aa6.02□□□□□ -1.45
HERC4-211ENST00000492996 S100A7P31151 101 aa6.02□□□□□ -1.45
HERC4-211ENST00000492996 MEOX1P50221 254 aa6.02□□□□□ -1.45
HERC4-211ENST00000492996 FXYD4P59646 89 aa6.02□□□□□ -1.45
HERC4-211ENST00000492996 PCBD1P61457 104 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms