RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	PRRX1	P54821	245 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	CDC42	P60953	191 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	CDK5	Q00535	292 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	TNFRSF9	Q07011	255 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	PPP1R8	Q12972	351 aa	Known RBP	4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	TMED1	Q13445	227 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	HES1	Q14469	280 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	KPNB1	Q14974	876 aa	Known RBP	4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	TMEM177	Q53S58	311 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	CEP78	Q5JTW2	689 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	OR52W1	Q6IF63	320 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	HAGHL	Q6PII5	290 aa	Predicted RBP	4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	BAIAP2L2	Q6UXY1	529 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	PLEKHG7	Q6ZR37	379 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	ASRGL1	Q7L266	308 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	TRPM8	Q7Z2W7	1104 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	LYG2	Q86SG7	212 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	ZNF676	Q8N7Q3	588 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	YIPF7	Q8N8F6	280 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	OR4P4	Q8NGL7	312 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	OR8D4	Q8NGM9	314 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	CANT1	Q8WVQ1	401 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	C10orf35	Q96D05	121 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	SDSL	Q96GA7	329 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	UBE2E2	Q96LR5	201 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602		Q96MT0	163 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	AMELY	Q99218	206 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	NIPSNAP1	Q9BPW8	284 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	ELOVL1	Q9BW60	279 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	CLEC7A	Q9BXN2	247 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	PBOV1	Q9GZY1	135 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	ALX4	Q9H161	411 aa	Predicted RBP	4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	TLNRD1	Q9H1K6	362 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	OR51J1	Q9H342	316 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	OR51I2	Q9H344	312 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	MED20	Q9H944	212 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	IMPAD1	Q9NX62	359 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	CHCHD3	Q9NX63	227 aa	Known RBP	4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	ZNF319	Q9P2F9	582 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	WARS2	Q9UGM6	360 aa	Known RBP	4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	ZNF222	Q9UK12	451 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	OR52A1	Q9UKL2	312 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	VSIG4	Q9Y279	399 aa		4.09	□□□□□ -1.75
SEC13-219	ENST00000492602	FLG2	Q5D862	2391 aa	Predicted RBP	4.09	□□□□□ -1.76
SEC13-219	ENST00000492602	FAM230A	A0A1W2PPH8	454 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	METTL15	A6NJ78	407 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	LEUTX	A8MZ59	168 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602		H0Y980	276 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602		J3QT63	122 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	TOR1A	O14656	332 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	FGF16	O43320	207 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	SYT7	O43581	403 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	RRP9	O43818	475 aa	Known RBP	4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	FKBP6	O75344	327 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	SULT1C4	O75897	302 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	IGHG4	P01861	327 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	RBP4	P02753	201 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	TMEM11	P17152	192 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	VDAC1	P21796	283 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	PRKACG	P22612	351 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	GABRR1	P24046	479 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	PSMB8	P28062	276 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	MNDA	P41218	407 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	RBP2	P50120	134 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	EDDM3B	P56851	147 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	RUNX1	Q01196	453 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	ROM1	Q03395	351 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	MEF2C	Q06413	473 aa	Predicted RBP	4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	HNF4G	Q14541	408 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	PTGES3	Q15185	160 aa	Known RBP	4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	TMEM244	Q5VVB8	128 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	NXNL2	Q5VZ03	156 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	CCDC144NL	Q6NUI1	221 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	ZNF322	Q6U7Q0	402 aa	Predicted RBP	4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	TRAPPC6B	Q86SZ2	158 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	SLC35F2	Q8IXU6	374 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	BATF2	Q8N1L9	274 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	DEFB125	Q8N687	156 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	IQCF1	Q8N6M8	205 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	ZNF491	Q8N8L2	437 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	ZNF565	Q8N9K5	539 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	ASCC1	Q8N9N2	400 aa	Known RBP	4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	SYT8	Q8NBV8	401 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	OR8B12	Q8NGG6	310 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	HAVCR2	Q8TDQ0	301 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	TRUB1	Q8WWH5	349 aa	Known RBP	4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	PP6455	Q8WZ26	134 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	TMEM106A	Q96A25	262 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	BORCS8	Q96FH0	119 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	IL4I1	Q96RQ9	567 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	S100A13	Q99584	98 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	CHCHD6	Q9BRQ6	235 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	TMEM133	Q9H2Q1	129 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	KLK15	Q9H2R5	256 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	GAL3ST2	Q9H3Q3	398 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	RHOF	Q9HBH0	211 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	GPR84	Q9NQS5	396 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	CLN6	Q9NWW5	311 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	OR14J1	Q9UGF5	321 aa		4.08	□□□□□ -1.76
SEC13-219	ENST00000492602	NUFIP1	Q9UHK0	495 aa	Known RBP	4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms