RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 KBTBD11-OT1A0A1B0GTJ5 212 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 IRGMA1A4Y4 181 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 ZNF729A6NN14 1252 aaPredicted RBP6.63□□□□□ -1.35
LSM2-213ENST00000491421 FAM90A22PA8MWA6 464 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 LEUTXA8MZ59 168 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 IGLV1-47P01700 117 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 OPN1MWP04001 364 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 OPN1MW2P0DN77 364 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 OPN1MW3P0DN78 364 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 CD28P10747 220 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 MYL12AP19105 171 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 CD24P25063 80 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 NFYBP25208 207 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 CD34P28906 385 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 CEACAM3P40198 252 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 GLP1RP43220 463 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 VDAC2P45880 294 aaPredicted RBP6.63□□□□□ -1.35
LSM2-213ENST00000491421 ETV1P50549 477 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 PRRX1P54821 245 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 BLCAPP62952 87 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 PPP3R1P63098 170 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 RBM39Q14498 530 aaKnown RBP6.63□□□□□ -1.35
LSM2-213ENST00000491421 RSU1Q15404 277 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 NSUN5P1Q3KNT7 163 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 PIGYQ3MUY2 71 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 OR2G6Q5TZ20 316 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 XAF1Q6GPH4 301 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 ELP2Q6IA86 826 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 ZNF529Q6P280 563 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 RPL22L1Q6P5R6 122 aaKnown RBP6.63□□□□□ -1.35
LSM2-213ENST00000491421 LYG1Q8N1E2 194 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 ZNF565Q8N9K5 539 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 OR51T1Q8NGJ9 327 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 OR10K1Q8NGX5 313 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 CNIH3Q8TBE1 160 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 CYGBQ8WWM9 190 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 TMEM106AQ96A25 262 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 CREB3L1Q96BA8 519 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 EAF1Q96JC9 268 aaPredicted RBP6.63□□□□□ -1.35
LSM2-213ENST00000491421 AKR1E2Q96JD6 320 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 RSRP1Q9BUV0 290 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 WNT10AQ9GZT5 417 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 ZNF286AQ9HBT8 521 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 KIF25Q9UIL4 384 aa6.63□□□□□ -1.35
LSM2-213ENST00000491421 DIMT1Q9UNQ2 313 aaKnown RBP6.63□□□□□ -1.35
LSM2-213ENST00000491421 A0A087X0M5 115 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 TRAV24A0A0B4J272 114 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 A0A1B0GX30 115 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 BUB1B-PAK6H3BSN5 160 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 HTR3BO95264 441 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 CLIC3O95833 236 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 MNDAP41218 407 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 OR3A4PP47883 348 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 EMX1Q04741 257 aaPredicted RBP6.62□□□□□ -1.35
LSM2-213ENST00000491421 MED21Q13503 144 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 IL13RA2Q14627 380 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 LRRC36Q1X8D7 754 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 C17orf58Q2M2W7 97 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 HLA-DRB5Q30154 266 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 TPTE2P1Q5T6R2 138 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 TTC23Q5W5X9 447 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 CCDC144NLQ6NUI1 221 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 Q6ZS46 218 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 C16orf82Q7Z2V1 217 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 NDUFA11Q86Y39 141 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 SETD9Q8NE22 299 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 OR13A1Q8NGR1 328 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 WIPF2Q8TF74 440 aaPredicted RBP6.62□□□□□ -1.35
LSM2-213ENST00000491421 SMIM19Q96E16 107 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 KIRREL1Q96J84 757 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 CITED2Q99967 270 aaPredicted RBP6.62□□□□□ -1.35
LSM2-213ENST00000491421 BARHL1Q9BZE3 327 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 METTL9Q9H1A3 318 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 LIN7BQ9HAP6 207 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 TMEM138Q9NPI0 162 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 CHCHD3Q9NX63 227 aaKnown RBP6.62□□□□□ -1.35
LSM2-213ENST00000491421 BABAM2Q9NXR7 383 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 CALYQ9NYX4 217 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 ING4Q9UNL4 249 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 ZNF281Q9Y2X9 895 aa6.62□□□□□ -1.35
LSM2-213ENST00000491421 EXOSC1Q9Y3B2 195 aaKnown RBP6.62□□□□□ -1.35
LSM2-213ENST00000491421 SIRT4Q9Y6E7 314 aaPredicted RBP6.62□□□□□ -1.35
LSM2-213ENST00000491421 OOSP1A8MZH6 123 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 G3V4G9 280 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 LY6LH3BQJ8 138 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 OGG1O15527 345 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 OR7C1O76099 320 aaPredicted RBP6.61□□□□□ -1.35
LSM2-213ENST00000491421 OR2F2O95006 317 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 CDRT1O95170 752 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 IL1AP01583 271 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 CSTBP04080 98 aaKnown RBP6.61□□□□□ -1.35
LSM2-213ENST00000491421 CGB3P0DN86 165 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 CGB7P0DN87 165 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 C21orf33P30042 268 aaPredicted RBP6.61□□□□□ -1.35
LSM2-213ENST00000491421 BDKRB2P30411 391 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 ZNF93P35789 620 aaPredicted RBP6.61□□□□□ -1.35
LSM2-213ENST00000491421 KCNJ3P48549 501 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 RIPK1Q13546 671 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 LTC4SQ16873 150 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 UTF1Q5T230 341 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms