RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 CYYR1Q96J86 154 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 ZNF488Q96MN9 340 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 URM1Q9BTM9 101 aaKnown RBP6.33□□□□□ -1.4
CLDN1-202ENST00000490800 TLNRD1Q9H1K6 362 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 NARFLQ9H6Q4 476 aa6.33□□□□□ -1.4
CLDN1-202ENST00000490800 ELF5Q9UKW6 265 aaPredicted RBP6.33□□□□□ -1.4
CLDN1-202ENST00000490800 RBMX2Q9Y388 322 aaKnown RBP6.33□□□□□ -1.4
CLDN1-202ENST00000490800 IGHV3-64DA0A0J9YX35 117 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 LINC00854A0A1B0GVQ3 168 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 TMEM235A6NFC5 223 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 FAM157AC9JC47 383 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 TRAPPC2LH3BP13 241 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 SULT1C2O00338 296 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 MFNGO00587 321 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 CDIPTO14735 213 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 PLA2G10O15496 165 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 PPIHO43447 177 aaKnown RBP6.32□□□□□ -1.4
CLDN1-202ENST00000490800 AKR7A2O43488 359 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 ORC5O43913 435 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 PTBP3O95758 552 aaKnown RBP6.32□□□□□ -1.4
CLDN1-202ENST00000490800 CYB5AP00167 134 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 GRPP07492 148 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 MELTFP08582 738 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 HIST1H1DP16402 221 aaKnown RBP6.32□□□□□ -1.4
CLDN1-202ENST00000490800 GNB3P16520 340 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 CPT2P23786 658 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 BLVRBP30043 206 aaPredicted RBP6.32□□□□□ -1.4
CLDN1-202ENST00000490800 PRSS3P35030 304 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 SRP14P37108 136 aaKnown RBP6.32□□□□□ -1.4
CLDN1-202ENST00000490800 RBM11P57052 281 aaKnown RBP6.32□□□□□ -1.4
CLDN1-202ENST00000490800 SELENOVP59797 346 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 FGF12P61328 243 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 CCL8P80075 99 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 MZT1Q08AG7 82 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 ASAH1Q13510 395 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 KLF9Q13886 244 aaPredicted RBP6.32□□□□□ -1.4
CLDN1-202ENST00000490800 OXA1LQ15070 435 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 TAF9Q16594 264 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 PIGYQ3MUY2 71 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 SPRNQ5BIV9 151 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 HACD4Q5VWC8 232 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 PRAMEF6Q5VXH4 476 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 OLFML2AQ68BL7 652 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 SIGIRRQ6IA17 410 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 Q6ZTK2 550 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 CENPSQ8N2Z9 138 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 POC5Q8NA72 575 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 C19orf18Q8NEA5 215 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 OR2Z1Q8NG97 314 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 CLDND2Q8NHS1 167 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 SETD6Q8TBK2 473 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 GPX8Q8TED1 209 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 CHPT1Q8WUD6 406 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 FCAMRQ8WWV6 532 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 ST8SIA4Q92187 359 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 RAB3CQ96E17 227 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 SEH1LQ96EE3 360 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 ARHGAP5-AS1Q96IT6 56 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 C19orf24Q9BVV8 132 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 C11orf54Q9H0W9 315 aaPredicted RBP6.32□□□□□ -1.4
CLDN1-202ENST00000490800 ZMAT3Q9HA38 289 aaKnown RBP6.32□□□□□ -1.4
CLDN1-202ENST00000490800 SCPEP1Q9HB40 452 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 PCDHB16Q9NRJ7 776 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 RBFOX1Q9NWB1 397 aaKnown RBP6.32□□□□□ -1.4
CLDN1-202ENST00000490800 NKIRAS2Q9NYR9 191 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 TREM2Q9NZC2 230 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 ZNF581Q9P0T4 197 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 MTFP1Q9UDX5 166 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 KCNK7Q9Y2U2 307 aa6.32□□□□□ -1.4
CLDN1-202ENST00000490800 PLSCR5A0PG75 271 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 C17orf100A8MU93 164 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 B4DSR2 109 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 GEMIN2O14893 280 aaKnown RBP6.31□□□□□ -1.4
CLDN1-202ENST00000490800 SPRY3O43610 288 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 SSX5O60225 188 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 IGHV1-46P01743 117 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 LPLP06858 475 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 ACAA1P09110 424 aaPredicted RBP6.31□□□□□ -1.4
CLDN1-202ENST00000490800 PGA5P0DJD9 388 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 SPNP16150 400 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 GABRR1P24046 479 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 CHATP28329 748 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 RFX2P48378 723 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 INPP1P49441 399 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 SRP9P49458 86 aaKnown RBP6.31□□□□□ -1.4
CLDN1-202ENST00000490800 ZNF81P51508 661 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 DVL1P1P54792 670 aaPredicted RBP6.31□□□□□ -1.4
CLDN1-202ENST00000490800 DEFA1P59665 94 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 DEFA3P59666 94 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 ERVK11-1P61568 191 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 PDCD1Q15116 288 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 MPPED2Q15777 294 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 PNLIPRP3Q17RR3 467 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 NHLRC3Q5JS37 347 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 ZNF57Q68EA5 555 aaPredicted RBP6.31□□□□□ -1.4
CLDN1-202ENST00000490800 DCDC5Q6ZRR9 648 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 ZNF826PQ6ZT77 177 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 GDPD3Q7L5L3 318 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 FAM58AQ8N1B3 248 aa6.31□□□□□ -1.4
CLDN1-202ENST00000490800 POC1AQ8NBT0 407 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms