RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 PRSS35Q8N3Z0 413 aa10.93□□□□□ -0.66
VARS-227ENST00000489979 CANT1Q8WVQ1 401 aa10.93□□□□□ -0.66
VARS-227ENST00000489979 CCDC124Q96CT7 223 aaKnown RBP10.93□□□□□ -0.66
VARS-227ENST00000489979 C10orf35Q96D05 121 aa10.93□□□□□ -0.66
VARS-227ENST00000489979 ADAT3Q96EY9 351 aaPredicted RBP10.93□□□□□ -0.66
VARS-227ENST00000489979 OR6C3Q9NZP0 311 aa10.93□□□□□ -0.66
VARS-227ENST00000489979 PSG11Q9UQ72 335 aa10.93□□□□□ -0.66
VARS-227ENST00000489979 METTL15A6NJ78 407 aa10.92□□□□□ -0.66
VARS-227ENST00000489979 SLC33A1O00400 549 aaPredicted RBP10.92□□□□□ -0.66
VARS-227ENST00000489979 KDM4BO94953 1096 aa10.92□□□□□ -0.66
VARS-227ENST00000489979 ELANEP08246 267 aa10.92□□□□□ -0.66
VARS-227ENST00000489979 CGB3P0DN86 165 aa10.92□□□□□ -0.66
VARS-227ENST00000489979 CGB7P0DN87 165 aa10.92□□□□□ -0.66
VARS-227ENST00000489979 PRKACBP22694 351 aa10.92□□□□□ -0.66
VARS-227ENST00000489979 GLP1RP43220 463 aa10.92□□□□□ -0.66
VARS-227ENST00000489979 GNG10P50151 68 aa10.92□□□□□ -0.66
VARS-227ENST00000489979 FOXE3Q13461 319 aa10.92□□□□□ -0.66
VARS-227ENST00000489979 LTC4SQ16873 150 aa10.92□□□□□ -0.66
VARS-227ENST00000489979 NXNL2Q5VZ03 156 aa10.92□□□□□ -0.66
VARS-227ENST00000489979 OVCH2Q7RTZ1 564 aa10.92□□□□□ -0.66
VARS-227ENST00000489979 TCEANCQ8N8B7 351 aa10.92□□□□□ -0.66
VARS-227ENST00000489979 RNF152Q8N8N0 203 aa10.92□□□□□ -0.66
VARS-227ENST00000489979 ASB9Q96DX5 294 aa10.92□□□□□ -0.66
VARS-227ENST00000489979 GON7Q9BXV9 100 aa10.92□□□□□ -0.66
VARS-227ENST00000489979 CALYQ9NYX4 217 aa10.92□□□□□ -0.66
VARS-227ENST00000489979 IDI2-AS1Q9NZ38 188 aa10.92□□□□□ -0.66
VARS-227ENST00000489979 SIRT4Q9Y6E7 314 aaPredicted RBP10.92□□□□□ -0.66
VARS-227ENST00000489979 A0A1W2PQL4 384 aaPredicted RBP10.91□□□□□ -0.66
VARS-227ENST00000489979 NCBP2LA6PVI3 153 aaKnown RBP10.91□□□□□ -0.66
VARS-227ENST00000489979 CCRL2O00421 344 aa10.91□□□□□ -0.66
VARS-227ENST00000489979 DEGS1O15121 323 aa10.91□□□□□ -0.66
VARS-227ENST00000489979 KIR3DL2P43630 455 aa10.91□□□□□ -0.66
VARS-227ENST00000489979 FHL3Q13643 280 aa10.91□□□□□ -0.66
VARS-227ENST00000489979 ZFAND6Q6FIF0 208 aa10.91□□□□□ -0.66
VARS-227ENST00000489979 UTS2BQ765I0 119 aa10.91□□□□□ -0.66
VARS-227ENST00000489979 TGIF2LXQ8IUE1 241 aa10.91□□□□□ -0.66
VARS-227ENST00000489979 CHST4Q8NCG5 386 aa10.91□□□□□ -0.66
VARS-227ENST00000489979 OR5D18Q8NGL1 313 aa10.91□□□□□ -0.66
VARS-227ENST00000489979 OR13A1Q8NGR1 328 aa10.91□□□□□ -0.66
VARS-227ENST00000489979 OR10X1Q8NGY0 326 aa10.91□□□□□ -0.66
VARS-227ENST00000489979 TMEM163Q8TC26 289 aa10.91□□□□□ -0.66
VARS-227ENST00000489979 HAVCR2Q8TDQ0 301 aa10.91□□□□□ -0.66
VARS-227ENST00000489979 C4orf3Q8WVX3 66 aa10.91□□□□□ -0.66
VARS-227ENST00000489979 FGGYQ96C11 551 aa10.91□□□□□ -0.66
VARS-227ENST00000489979 EAF1Q96JC9 268 aaPredicted RBP10.91□□□□□ -0.66
VARS-227ENST00000489979 OPALINQ96PE5 141 aa10.91□□□□□ -0.66
VARS-227ENST00000489979 SPACA5Q96QH8 159 aa10.91□□□□□ -0.66
VARS-227ENST00000489979 PRRG3Q9BZD7 231 aa10.91□□□□□ -0.66
VARS-227ENST00000489979 ABCG5Q9H222 651 aa10.91□□□□□ -0.66
VARS-227ENST00000489979 ARL2BPQ9Y2Y0 163 aa10.91□□□□□ -0.66
VARS-227ENST00000489979 MEIKINA0A087WXM9 373 aa10.9□□□□□ -0.66
VARS-227ENST00000489979 IGHV3-72A0A0B4J1Y9 119 aa10.9□□□□□ -0.66
VARS-227ENST00000489979 A0A1W2PPE3 182 aa10.9□□□□□ -0.66
VARS-227ENST00000489979 HSPB6O14558 160 aa10.9□□□□□ -0.66
VARS-227ENST00000489979 SULT1C4O75897 302 aa10.9□□□□□ -0.66
VARS-227ENST00000489979 DCTN3O75935 186 aa10.9□□□□□ -0.66
VARS-227ENST00000489979 APOL3O95236 402 aa10.9□□□□□ -0.66
VARS-227ENST00000489979 UBCP0CG48 685 aaKnown RBP10.9□□□□□ -0.66
VARS-227ENST00000489979 ZNF20P17024 532 aa10.9□□□□□ -0.66
VARS-227ENST00000489979 DAPP51397 102 aa10.9□□□□□ -0.66
VARS-227ENST00000489979 EFNB1P98172 346 aa10.9□□□□□ -0.66
VARS-227ENST00000489979 EBI3Q14213 229 aa10.9□□□□□ -0.66
VARS-227ENST00000489979 MOB3BQ86TA1 216 aa10.9□□□□□ -0.66
VARS-227ENST00000489979 GID4Q8IVV7 300 aa10.9□□□□□ -0.66
VARS-227ENST00000489979 ZNF565Q8N9K5 539 aa10.9□□□□□ -0.66
VARS-227ENST00000489979 Q8N9W7 124 aa10.9□□□□□ -0.66
VARS-227ENST00000489979 OR11H1Q8NG94 326 aa10.9□□□□□ -0.66
VARS-227ENST00000489979 OR51T1Q8NGJ9 327 aa10.9□□□□□ -0.66
VARS-227ENST00000489979 RFESDQ8TAC1 157 aa10.9□□□□□ -0.66
VARS-227ENST00000489979 DNAJC9Q8WXX5 260 aa10.9□□□□□ -0.66
VARS-227ENST00000489979 SPSB1Q96BD6 273 aa10.9□□□□□ -0.66
VARS-227ENST00000489979 IL4I1Q96RQ9 567 aa10.9□□□□□ -0.66
VARS-227ENST00000489979 OSBPL10Q9BXB5 764 aa10.9□□□□□ -0.66
VARS-227ENST00000489979 NEK6Q9HC98 313 aa10.9□□□□□ -0.66
VARS-227ENST00000489979 KRT84Q9NSB2 600 aa10.9□□□□□ -0.66
VARS-227ENST00000489979 LIN7CQ9NUP9 197 aaKnown RBP10.9□□□□□ -0.66
VARS-227ENST00000489979 KIF25Q9UIL4 384 aa10.9□□□□□ -0.66
VARS-227ENST00000489979 IGHV1-3A0A0C4DH29 117 aa10.89□□□□□ -0.67
VARS-227ENST00000489979 AQP12BA6NM10 295 aa10.89□□□□□ -0.67
VARS-227ENST00000489979 HSD17B6O14756 317 aa10.89□□□□□ -0.67
VARS-227ENST00000489979 IL1AP01583 271 aa10.89□□□□□ -0.67
VARS-227ENST00000489979 OR2T7P0C7T2 308 aa10.89□□□□□ -0.67
VARS-227ENST00000489979 OCM2P0CE71 109 aa10.89□□□□□ -0.67
VARS-227ENST00000489979 OCMP0CE72 109 aaPredicted RBP10.89□□□□□ -0.67
VARS-227ENST00000489979 C21orf33P30042 268 aaPredicted RBP10.89□□□□□ -0.67
VARS-227ENST00000489979 REG1BP48304 166 aa10.89□□□□□ -0.67
VARS-227ENST00000489979 INSL3P51460 131 aa10.89□□□□□ -0.67
VARS-227ENST00000489979 CFHR3Q02985 330 aa10.89□□□□□ -0.67
VARS-227ENST00000489979 ZNF816Q0VGE8 651 aaPredicted RBP10.89□□□□□ -0.67
VARS-227ENST00000489979 CDK5R1Q15078 307 aa10.89□□□□□ -0.67
VARS-227ENST00000489979 PLECQ15149 4684 aaKnown RBP10.89□□□□□ -0.67
VARS-227ENST00000489979 AQP12AQ8IXF9 295 aa10.89□□□□□ -0.67
VARS-227ENST00000489979 Q8N6K4 173 aa10.89□□□□□ -0.67
VARS-227ENST00000489979 OR10H4Q8NGA5 316 aa10.89□□□□□ -0.67
VARS-227ENST00000489979 NSL1Q96IY1 281 aa10.89□□□□□ -0.67
VARS-227ENST00000489979 CITED4Q96RK1 184 aa10.89□□□□□ -0.67
VARS-227ENST00000489979 ZMAT4Q9H898 229 aa10.89□□□□□ -0.67
VARS-227ENST00000489979 LINC00574Q9H8X3 128 aa10.89□□□□□ -0.67
VARS-227ENST00000489979 RHOFQ9HBH0 211 aa10.89□□□□□ -0.67
VARS-227ENST00000489979 NPIPB11E5RHQ5 1161 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms