RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 SHBQ15464 509 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 MSMO1Q15800 293 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 MEP1BQ16820 701 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 GAB4Q2WGN9 574 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 C3orf36Q3SXR2 165 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 ACSF3Q4G176 576 aaPredicted RBP4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 CTXN3Q4LDR2 81 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 SPATA45Q537H7 98 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 PRAMEF20Q5VT98 475 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 C1orf140Q5VVS0 124 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 SLC18B1Q6NT16 456 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 KCTD18Q6PI47 426 aaPredicted RBP4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 PET117Q6UWS5 81 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 ERN2Q76MJ5 926 aaKnown RBP4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 MRGPRGQ86SM5 289 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 ZNF761Q86XN6 746 aaPredicted RBP4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 TMEM123Q8N131 208 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 C2orf73Q8N5S3 287 aaPredicted RBP4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 OR2C3Q8N628 320 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 TCTEX1D1Q8N7M0 179 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 OR5AU1Q8NGC0 362 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 BCL2L2Q92843 193 aaPredicted RBP4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 WDYHV1Q96HA8 205 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 C16orf92Q96LL3 132 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 SLC46A1Q96NT5 459 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 LRRC3BQ96PB8 259 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 HSPB9Q9BQS6 159 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 MRPL13Q9BYD1 178 aaKnown RBP4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 AICDAQ9GZX7 198 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 MANBALQ9NQG1 85 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 DECR2Q9NUI1 292 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 ELOVL5Q9NYP7 299 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 ZNF581Q9P0T4 197 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 TAC3Q9UHF0 121 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 SLC5A6Q9Y289 635 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 INSL5Q9Y5Q6 135 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 HEATR5BQ9P2D3 2071 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 NPIPA5A0A0B4J1W7 369 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 DUXBA0A1W2PPF3 345 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 PRSS38A1L453 326 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 MYADML2A6NDP7 307 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 ZNF840PA6NDX5 716 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 C17orf105B2RV13 164 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 XRCC2O43543 280 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 KBTBD11O94819 623 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 TOX4O94842 621 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 VAMP5O95183 116 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 CSTAP01040 98 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 HIST1H1DP16402 221 aaKnown RBP4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 AADACP22760 399 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 CD40P25942 277 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 TSPOP30536 169 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 GCH1P30793 250 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 VIPR2P41587 438 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 GRK6P43250 576 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 TM4SF4P48230 202 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 FLT3LGP49771 235 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 HINT1P49773 126 aaPredicted RBP4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 BIDP55957 195 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 CTXN1P60606 82 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 YPEL3P61236 119 aaPredicted RBP4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 RPL23P62829 140 aaKnown RBP4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 CSNK2A1P68400 391 aaPredicted RBP4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 CSNK1G2P78368 415 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 MRPS6P82932 125 aaKnown RBP4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 RBPJQ06330 500 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 TMEM187Q14656 261 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 CD226Q15762 336 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 PSG3Q16557 428 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 ITPRIPL2Q3MIP1 535 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 PLAC9Q5JTB6 97 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 LRP11Q86VZ4 500 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 NIT1Q86X76 327 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 COMMD2Q86X83 199 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 LRRC25Q8N386 305 aaPredicted RBP4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 LRRC75AQ8NAA5 344 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 NECAP1Q8NC96 275 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 CSNK2A3Q8NEV1 391 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 OR52R1Q8NGF1 315 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 KCNG3Q8TAE7 436 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 WFDC5Q8TCV5 224 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 LIPHQ8WWY8 451 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 FAM3CQ92520 227 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 C18orf12Q96KH6 178 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 AMELYQ99218 206 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 SMIM7Q9BQ49 75 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 ST6GALNAC5Q9BVH7 336 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 C11orf1Q9H5F2 150 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 TPSG1Q9NRR2 321 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 FBXO34Q9NWN3 711 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 MRPL22Q9NWU5 206 aaKnown RBP4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 CLN8Q9UBY8 286 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 SMPXQ9UHP9 88 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 C19orf53Q9UNZ5 99 aaPredicted RBP4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 B9D1Q9UPM9 204 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 RFNGQ9Y644 331 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 DOCK3Q8IZD9 2030 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 TICRRQ7Z2Z1 1910 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 ARID1AO14497 2285 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms