RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 HEPN1Q6WQI6 88 aa9.35□□□□□ -0.91
ACTN4-206ENST00000489451 ETV3LQ6ZN32 361 aa9.35□□□□□ -0.91
ACTN4-206ENST00000489451 SERPINA12Q8IW75 414 aa9.35□□□□□ -0.91
ACTN4-206ENST00000489451 CNIH3Q8TBE1 160 aa9.35□□□□□ -0.91
ACTN4-206ENST00000489451 TSEN15Q8WW01 171 aaKnown RBP9.35□□□□□ -0.91
ACTN4-206ENST00000489451 CPNE2Q96FN4 548 aaPredicted RBP9.35□□□□□ -0.91
ACTN4-206ENST00000489451 OPALINQ96PE5 141 aa9.35□□□□□ -0.91
ACTN4-206ENST00000489451 RBM14Q96PK6 669 aaKnown RBP9.35□□□□□ -0.91
ACTN4-206ENST00000489451 SLC25A33Q9BSK2 321 aa9.35□□□□□ -0.91
ACTN4-206ENST00000489451 PPIL3Q9H2H8 161 aaKnown RBP9.35□□□□□ -0.91
ACTN4-206ENST00000489451 LIN7BQ9HAP6 207 aa9.35□□□□□ -0.91
ACTN4-206ENST00000489451 DPM3Q9P2X0 92 aa9.35□□□□□ -0.91
ACTN4-206ENST00000489451 DHDHQ9UQ10 334 aa9.35□□□□□ -0.91
ACTN4-206ENST00000489451 GSTK1Q9Y2Q3 226 aa9.35□□□□□ -0.91
ACTN4-206ENST00000489451 EXOSC1Q9Y3B2 195 aaKnown RBP9.35□□□□□ -0.91
ACTN4-206ENST00000489451 PCDHGB5Q9Y5G0 923 aa9.35□□□□□ -0.91
ACTN4-206ENST00000489451 A0A087X0M5 115 aa9.34□□□□□ -0.91
ACTN4-206ENST00000489451 A0A1B0GX30 115 aa9.34□□□□□ -0.91
ACTN4-206ENST00000489451 WI2-2373I1.2A0A1W2PRP0 233 aa9.34□□□□□ -0.91
ACTN4-206ENST00000489451 EFCAB10A6NFE3 127 aa9.34□□□□□ -0.91
ACTN4-206ENST00000489451 CASQ2O14958 399 aaPredicted RBP9.34□□□□□ -0.91
ACTN4-206ENST00000489451 MAGEB3O15480 346 aa9.34□□□□□ -0.91
ACTN4-206ENST00000489451 PEX14O75381 377 aa9.34□□□□□ -0.91
ACTN4-206ENST00000489451 ZFPL1O95159 310 aa9.34□□□□□ -0.91
ACTN4-206ENST00000489451 CD2P06729 351 aa9.34□□□□□ -0.91
ACTN4-206ENST00000489451 LIMS3P0CW19 117 aa9.34□□□□□ -0.91
ACTN4-206ENST00000489451 LIMS4P0CW20 117 aa9.34□□□□□ -0.91
ACTN4-206ENST00000489451 CGB3P0DN86 165 aa9.34□□□□□ -0.91
ACTN4-206ENST00000489451 CGB7P0DN87 165 aa9.34□□□□□ -0.91
ACTN4-206ENST00000489451 CD33P20138 364 aa9.34□□□□□ -0.91
ACTN4-206ENST00000489451 ZP1P60852 638 aa9.34□□□□□ -0.91
ACTN4-206ENST00000489451 ADARB1P78563 741 aaKnown RBP9.34□□□□□ -0.91
ACTN4-206ENST00000489451 CDK5R1Q15078 307 aa9.34□□□□□ -0.91
ACTN4-206ENST00000489451 HLA-DRB5Q30154 266 aa9.34□□□□□ -0.91
ACTN4-206ENST00000489451 ARSJQ5FYB0 599 aaPredicted RBP9.34□□□□□ -0.91
ACTN4-206ENST00000489451 SPIN3Q5JUX0 258 aa9.34□□□□□ -0.91
ACTN4-206ENST00000489451 RPL22L1Q6P5R6 122 aaKnown RBP9.34□□□□□ -0.91
ACTN4-206ENST00000489451 C16orf82Q7Z2V1 217 aa9.34□□□□□ -0.91
ACTN4-206ENST00000489451 TRAPPC6BQ86SZ2 158 aa9.34□□□□□ -0.91
ACTN4-206ENST00000489451 OR5D18Q8NGL1 313 aa9.34□□□□□ -0.91
ACTN4-206ENST00000489451 TMEM80Q96HE8 168 aa9.34□□□□□ -0.91
ACTN4-206ENST00000489451 ZCCHC4Q9H5U6 513 aa9.34□□□□□ -0.91
ACTN4-206ENST00000489451 BABAM2Q9NXR7 383 aa9.34□□□□□ -0.91
ACTN4-206ENST00000489451 DIMT1Q9UNQ2 313 aaKnown RBP9.34□□□□□ -0.91
ACTN4-206ENST00000489451 TCRBV4S1A1TA0A5B7 111 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 ODAMA1E959 279 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 FAM90A18PA6NE21 464 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 FAM90A16PA6NEW6 464 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 FAM90A20PA6NIJ5 464 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 FAM90A9PA6NNJ1 464 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 FAM90A12PA8MX19 464 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 FAM90A5PA8MXJ8 464 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 BUB1B-PAK6H3BSN5 160 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 SLC33A1O00400 549 aaPredicted RBP9.33□□□□□ -0.92
ACTN4-206ENST00000489451 OR2F2O95006 317 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 MT-ND2P03891 347 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 CSN2P05814 226 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 HCKP08631 526 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 FAM90A15PP0C7V4 464 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 FAM90A13PP0C7W8 464 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 FAM90A14PP0C7W9 464 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 FAM90A24PP0C7X0 464 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 PF4V1P10720 104 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 TPTE2P1Q5T6R2 138 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 C18orf65Q6ZTR6 163 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 RTN4RL2Q86UN3 420 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 LINC00482Q8N8I6 264 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 OR13C9Q8NGT0 318 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 GPR148Q8TDV2 347 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 PDCD1LG2Q9BQ51 273 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 ZNF649Q9BS31 505 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 RHOFQ9HBH0 211 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 EXOSC4Q9NPD3 245 aaKnown RBP9.33□□□□□ -0.92
ACTN4-206ENST00000489451 TAS2R3Q9NYW6 316 aa9.33□□□□□ -0.92
ACTN4-206ENST00000489451 TSSC4Q9Y5U2 329 aaPredicted RBP9.33□□□□□ -0.92
ACTN4-206ENST00000489451 TRGV10A0A0A0MS01 117 aa9.32□□□□□ -0.92
ACTN4-206ENST00000489451 E9PI62 339 aa9.32□□□□□ -0.92
ACTN4-206ENST00000489451 SULT1B1O43704 296 aa9.32□□□□□ -0.92
ACTN4-206ENST00000489451 ALDOBP05062 364 aa9.32□□□□□ -0.92
ACTN4-206ENST00000489451 RAB3AP20336 220 aa9.32□□□□□ -0.92
ACTN4-206ENST00000489451 ETV1P50549 477 aa9.32□□□□□ -0.92
ACTN4-206ENST00000489451 EGFEM1PQ0D2K5 195 aa9.32□□□□□ -0.92
ACTN4-206ENST00000489451 ST3GAL4Q11206 333 aa9.32□□□□□ -0.92
ACTN4-206ENST00000489451 DIAPH2-AS1Q14236 149 aa9.32□□□□□ -0.92
ACTN4-206ENST00000489451 ATXN7L3Q14CW9 347 aaPredicted RBP9.32□□□□□ -0.92
ACTN4-206ENST00000489451 CENPVQ7Z7K6 275 aaPredicted RBP9.32□□□□□ -0.92
ACTN4-206ENST00000489451 PARP16Q8N5Y8 322 aa9.32□□□□□ -0.92
ACTN4-206ENST00000489451 ZNF596Q8TC21 504 aa9.32□□□□□ -0.92
ACTN4-206ENST00000489451 KIRREL1Q96J84 757 aa9.32□□□□□ -0.92
ACTN4-206ENST00000489451 VCX3BQ9H321 246 aa9.32□□□□□ -0.92
ACTN4-206ENST00000489451 GAL3ST2Q9H3Q3 398 aa9.32□□□□□ -0.92
ACTN4-206ENST00000489451 ING3Q9NXR8 418 aa9.32□□□□□ -0.92
ACTN4-206ENST00000489451 CNOT2Q9NZN8 540 aaKnown RBP9.32□□□□□ -0.92
ACTN4-206ENST00000489451 ZNF581Q9P0T4 197 aa9.32□□□□□ -0.92
ACTN4-206ENST00000489451 A0A1W2PPI3 338 aa9.31□□□□□ -0.92
ACTN4-206ENST00000489451 LEUTXA8MZ59 168 aa9.31□□□□□ -0.92
ACTN4-206ENST00000489451 SH2D1BO14796 132 aa9.31□□□□□ -0.92
ACTN4-206ENST00000489451 IGHV3-7P01780 117 aa9.31□□□□□ -0.92
ACTN4-206ENST00000489451 TMEM225BP0DP42 221 aa9.31□□□□□ -0.92
ACTN4-206ENST00000489451 HOXD3P31249 432 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms