RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 OR52H1Q8NGJ2 320 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 OR6N1Q8NGY5 312 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 OR6X1Q8NH79 312 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 RFT1Q96AA3 541 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 C4orf45Q96LM5 186 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 SOSTQ9BQB4 213 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 ZCCHC4Q9H5U6 513 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 PPP1R3EQ9H7J1 279 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 NIPAL2Q9H841 368 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 MRPL22Q9NWU5 206 aaKnown RBP5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 ZDHHC8Q9ULC8 765 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 AK6Q9Y3D8 172 aaKnown RBP5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 LRP12Q9Y561 859 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 ETV7Q9Y603 341 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 R4GMQ9 66 aa5.88□□□□□ -1.47
EXOSC3-206ENST00000489414 TRBV5-5A0A0J9YX44 114 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 OR4C45A6NMZ5 311 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 IFITM5A6NNB3 132 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 PAX4O43316 350 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 LYRM1O43325 122 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 SULT1B1O43704 296 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 UBL3O95164 117 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 FSTL3O95633 263 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 HLA-DQB1P01920 261 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 EIF4EP06730 217 aaKnown RBP5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 SNRNP70P08621 437 aaKnown RBP5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 UBCP0CG48 685 aaKnown RBP5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 SPNP16150 400 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 ATF1P18846 271 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 HSD11B1P28845 292 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 RPS27P42677 84 aaKnown RBP5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 CSNK1A1P48729 337 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 ZNF84P51523 738 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 CAPZA1P52907 286 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 AP3S2P59780 193 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 PRB3Q04118 309 aaPredicted RBP5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 FMODQ06828 376 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 CAMK2DQ13557 499 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 SRSF7Q16629 238 aaKnown RBP eCLIP5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 WDR38Q5JTN6 314 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 HES5Q5TA89 166 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 Q5VSD8 79 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 TMEM244Q5VVB8 128 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 RSBN1Q5VWQ0 802 aaPredicted RBP5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 LYPD2Q6UXB3 125 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 GDPD3Q7L5L3 318 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 OR2W3Q7Z3T1 314 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 DCXRQ7Z4W1 244 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 NR2C2APQ86WQ0 139 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 CATSPERDQ86XM0 798 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 ZNF584Q8IVC4 421 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 CADM3Q8N126 398 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 PAQR4Q8N4S7 273 aaPredicted RBP5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 OR4M1Q8NGD0 313 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 OR9K2Q8NGE7 335 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 OR13C3Q8NGS6 347 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 LGALS14Q8TCE9 139 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 ST6GALNAC6Q969X2 333 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 TMEM106AQ96A25 262 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 RNF183Q96D59 192 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 S100A16Q96FQ6 103 aaKnown RBP5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 RAX2Q96IS3 184 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 TXNDC15Q96J42 360 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 KCNJ15Q99712 375 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 EMC6Q9BV81 110 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 SSBP4Q9BWG4 385 aaPredicted RBP5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 KRTAP4-7Q9BYR0 210 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 LINC00470Q9BZP3 86 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 PPIL3Q9H2H8 161 aaKnown RBP5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 OR51B6Q9H340 312 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 C1orf198Q9H425 327 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 MOB1AQ9H8S9 216 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 SEBOXQ9HB31 216 aaPredicted RBP5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 CENPMQ9NSP4 180 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 TBC1D24Q9ULP9 559 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 HHLA2Q9UM44 414 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 PPP1R3CQ9UQK1 317 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 KPTNQ9Y664 436 aa5.87□□□□□ -1.47
EXOSC3-206ENST00000489414 LRP1Q07954 4544 aaKnown RBP5.86□□□□□ -1.47
EXOSC3-206ENST00000489414 TRBV5-7A0A0A0MS05 114 aa5.86□□□□□ -1.47
EXOSC3-206ENST00000489414 TMEM269A0A1B0GVZ9 245 aa5.86□□□□□ -1.47
EXOSC3-206ENST00000489414 KRTAP29-1A8MX34 341 aaPredicted RBP5.86□□□□□ -1.47
EXOSC3-206ENST00000489414 PRR32B1ATL7 298 aa5.86□□□□□ -1.47
EXOSC3-206ENST00000489414 ZNF878C9JN71 531 aa5.86□□□□□ -1.47
EXOSC3-206ENST00000489414 J3QW42 95 aa5.86□□□□□ -1.47
EXOSC3-206ENST00000489414 XRCC3O43542 346 aa5.86□□□□□ -1.47
EXOSC3-206ENST00000489414 ORC5O43913 435 aa5.86□□□□□ -1.47
EXOSC3-206ENST00000489414 TPPPO94811 219 aa5.86□□□□□ -1.47
EXOSC3-206ENST00000489414 GSTT2BP0CG30 244 aa5.86□□□□□ -1.47
EXOSC3-206ENST00000489414 PGA4P0DJD7 388 aa5.86□□□□□ -1.47
EXOSC3-206ENST00000489414 PGA3P0DJD8 388 aa5.86□□□□□ -1.47
EXOSC3-206ENST00000489414 PSKH1P11801 424 aa5.86□□□□□ -1.47
EXOSC3-206ENST00000489414 CD79AP11912 226 aa5.86□□□□□ -1.47
EXOSC3-206ENST00000489414 TNFRSF1AP19438 455 aa5.86□□□□□ -1.47
EXOSC3-206ENST00000489414 DCTDP32321 178 aa5.86□□□□□ -1.47
EXOSC3-206ENST00000489414 KIR3DL2P43630 455 aa5.86□□□□□ -1.47
EXOSC3-206ENST00000489414 EIF2B2P49770 351 aaKnown RBP5.86□□□□□ -1.47
EXOSC3-206ENST00000489414 CLDN17P56750 224 aa5.86□□□□□ -1.47
EXOSC3-206ENST00000489414 LINC00205P59089 165 aa5.86□□□□□ -1.47
EXOSC3-206ENST00000489414 GRB2P62993 217 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms