RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 RAC3P60763 192 aa15.48■□□□□ 0.07
NPHP4-209ENST00000489180 SPEM2Q0P670 501 aa15.48■□□□□ 0.07
NPHP4-209ENST00000489180 OR4P4Q8NGL7 312 aa15.48■□□□□ 0.07
NPHP4-209ENST00000489180 HSF4Q9ULV5 492 aa15.48■□□□□ 0.07
NPHP4-209ENST00000489180 MBPP02686 304 aaPredicted RBP15.48■□□□□ 0.07
NPHP4-209ENST00000489180 ZNF260Q3ZCT1 412 aa15.48■□□□□ 0.07
NPHP4-209ENST00000489180 PCED1AQ9H1Q7 454 aa15.48■□□□□ 0.07
NPHP4-209ENST00000489180 GAL3ST2Q9H3Q3 398 aa15.48■□□□□ 0.07
NPHP4-209ENST00000489180 FKBP11Q9NYL4 201 aa15.48■□□□□ 0.07
NPHP4-209ENST00000489180 M0QZ24 198 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 ANKRD34CP0C6C1 535 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 CRISP2P16562 243 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 FOXL2P58012 376 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 Q6ZN92 141 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 DTD1Q8TEA8 209 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 MRGPRFQ96AM1 343 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 MANBALQ9NQG1 85 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 SIGLEC5O15389 551 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 SIGLEC14Q08ET2 396 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 PSG5Q15238 335 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 CT55Q8WUE5 264 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 FUT9Q9Y231 359 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 MPC1Q9Y5U8 109 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 A0A087X0M5 115 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 A0A1B0GX30 115 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 HAND1O96004 215 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 TMEM97Q5BJF2 176 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 C19orf35Q6ZS72 473 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 MRPS18BQ9Y676 258 aaKnown RBP15.47■□□□□ 0.07
NPHP4-209ENST00000489180 A0A1W2PN81 502 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 K7ESF4 209 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 MPLP40238 635 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 MAGEA5P43359 124 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 HFEQ30201 348 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 OR1L6Q8NGR2 347 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 WASHC3Q9Y3C0 194 aa15.47■□□□□ 0.07
NPHP4-209ENST00000489180 H3BQ15 152 aa15.46■□□□□ 0.07
NPHP4-209ENST00000489180 ZNF383Q8NA42 475 aa15.46■□□□□ 0.07
NPHP4-209ENST00000489180 PAPPAQ13219 1627 aa15.46■□□□□ 0.07
NPHP4-209ENST00000489180 hADV38S2A0JD32 116 aa15.46■□□□□ 0.07
NPHP4-209ENST00000489180 MRPS11P82912 194 aaKnown RBP15.46■□□□□ 0.07
NPHP4-209ENST00000489180 STPG2Q8N412 459 aa15.46■□□□□ 0.07
NPHP4-209ENST00000489180 TINAGQ9UJW2 476 aa15.46■□□□□ 0.07
NPHP4-209ENST00000489180 LSM6P62312 80 aaKnown RBP15.46■□□□□ 0.07
NPHP4-209ENST00000489180 DCAF12L2Q5VW00 463 aa15.46■□□□□ 0.07
NPHP4-209ENST00000489180 SFTPA2Q8IWL1 248 aa15.46■□□□□ 0.07
NPHP4-209ENST00000489180 OR10G8Q8NGN5 311 aa15.46■□□□□ 0.07
NPHP4-209ENST00000489180 RNF2Q99496 336 aa15.46■□□□□ 0.07
NPHP4-209ENST00000489180 SEBOXQ9HB31 216 aaPredicted RBP15.46■□□□□ 0.07
NPHP4-209ENST00000489180 ELOA3CA0A087WX78 387 aaPredicted RBP15.46■□□□□ 0.06
NPHP4-209ENST00000489180 PAGE4O60829 102 aa15.46■□□□□ 0.06
NPHP4-209ENST00000489180 PNRC1Q12796 327 aaPredicted RBP15.46■□□□□ 0.06
NPHP4-209ENST00000489180 WDR73Q6P4I2 378 aa15.46■□□□□ 0.06
NPHP4-209ENST00000489180 ABHD3Q8WU67 409 aa15.46■□□□□ 0.06
NPHP4-209ENST00000489180 LHX9Q9NQ69 397 aa15.46■□□□□ 0.06
NPHP4-209ENST00000489180 ZMAT5Q9UDW3 170 aaKnown RBP15.46■□□□□ 0.06
NPHP4-209ENST00000489180 SOX8P57073 446 aa15.45■□□□□ 0.06
NPHP4-209ENST00000489180 FOXO1Q12778 655 aa15.45■□□□□ 0.06
NPHP4-209ENST00000489180 CEBPEQ15744 281 aa15.45■□□□□ 0.06
NPHP4-209ENST00000489180 NPAS1Q99742 590 aa15.45■□□□□ 0.06
NPHP4-209ENST00000489180 OR2H1Q9GZK4 316 aa15.45■□□□□ 0.06
NPHP4-209ENST00000489180 IGKV1D-16P01601 117 aa15.45■□□□□ 0.06
NPHP4-209ENST00000489180 VSIG10L2P0DP72 767 aa15.45■□□□□ 0.06
NPHP4-209ENST00000489180 CCL3P10147 92 aa15.45■□□□□ 0.06
NPHP4-209ENST00000489180 CXCL2P19875 107 aa15.45■□□□□ 0.06
NPHP4-209ENST00000489180 COL19A1Q14993 1142 aa15.45■□□□□ 0.06
NPHP4-209ENST00000489180 MRPL54Q6P161 138 aaKnown RBP15.45■□□□□ 0.06
NPHP4-209ENST00000489180 DEFB124Q8NES8 71 aa15.45■□□□□ 0.06
NPHP4-209ENST00000489180 OR4S2Q8NH73 311 aa15.45■□□□□ 0.06
NPHP4-209ENST00000489180 LPAR5Q9H1C0 372 aa15.45■□□□□ 0.06
NPHP4-209ENST00000489180 TMPRSS2O15393 492 aa15.45■□□□□ 0.06
NPHP4-209ENST00000489180 ZNF253O75346 499 aa15.45■□□□□ 0.06
NPHP4-209ENST00000489180 CCL4P13236 92 aa15.45■□□□□ 0.06
NPHP4-209ENST00000489180 PDPNQ86YL7 162 aa15.45■□□□□ 0.06
NPHP4-209ENST00000489180 MAFAQ8NHW3 353 aaPredicted RBP15.45■□□□□ 0.06
NPHP4-209ENST00000489180 GSX1Q9H4S2 264 aaPredicted RBP15.45■□□□□ 0.06
NPHP4-209ENST00000489180 SLC7A10Q9NS82 523 aa15.45■□□□□ 0.06
NPHP4-209ENST00000489180 RCC2Q9P258 522 aaKnown RBP15.45■□□□□ 0.06
NPHP4-209ENST00000489180 OOEPA6NGQ2 149 aa15.45■□□□□ 0.06
NPHP4-209ENST00000489180 PSG2P11465 335 aa15.45■□□□□ 0.06
NPHP4-209ENST00000489180 VDAC1P21796 283 aa15.45■□□□□ 0.06
NPHP4-209ENST00000489180 KIR3DL2P43630 455 aa15.45■□□□□ 0.06
NPHP4-209ENST00000489180 CLPPQ16740 277 aaPredicted RBP15.45■□□□□ 0.06
NPHP4-209ENST00000489180 C9orf40Q8IXQ3 194 aa15.45■□□□□ 0.06
NPHP4-209ENST00000489180 APELAP0DMC3 54 aa15.45■□□□□ 0.06
NPHP4-209ENST00000489180 ANAPC16Q96DE5 110 aa15.45■□□□□ 0.06
NPHP4-209ENST00000489180 STRCQ7RTU9 1775 aa15.44■□□□□ 0.06
NPHP4-209ENST00000489180 WISP3O95389 354 aaPredicted RBP15.44■□□□□ 0.06
NPHP4-209ENST00000489180 HLA-DRB5Q30154 266 aa15.44■□□□□ 0.06
NPHP4-209ENST00000489180 HIKESHIQ53FT3 197 aa15.44■□□□□ 0.06
NPHP4-209ENST00000489180 RNF133Q8WVZ7 376 aa15.44■□□□□ 0.06
NPHP4-209ENST00000489180 VAX2Q9UIW0 290 aa15.44■□□□□ 0.06
NPHP4-209ENST00000489180 TMEM50BP56557 158 aa15.44■□□□□ 0.06
NPHP4-209ENST00000489180 SLC26A10Q8NG04 563 aa15.44■□□□□ 0.06
NPHP4-209ENST00000489180 NINQ8N4C6 2090 aa15.44■□□□□ 0.06
NPHP4-209ENST00000489180 ZNHIT1O43257 154 aa15.44■□□□□ 0.06
NPHP4-209ENST00000489180 SMUG1Q53HV7 270 aa15.44■□□□□ 0.06
NPHP4-209ENST00000489180 SLC23A3Q6PIS1 610 aa15.44■□□□□ 0.06
NPHP4-209ENST00000489180 OR10A7Q8NGE5 316 aa15.44■□□□□ 0.06
NPHP4-209ENST00000489180 TMEM204Q9BSN7 226 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms