RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 LIAT1Q6ZQX7 453 aa20.15■□□□□ 0.82
HMGN1-217ENST00000489072 STX19Q8N4C7 294 aa20.15■□□□□ 0.82
HMGN1-217ENST00000489072 OR4C13Q8NGP0 309 aa20.15■□□□□ 0.82
HMGN1-217ENST00000489072 VCXQ9H320 206 aa20.15■□□□□ 0.82
HMGN1-217ENST00000489072 ING4Q9UNL4 249 aa20.15■□□□□ 0.82
HMGN1-217ENST00000489072 TRBV5-7A0A0A0MS05 114 aa20.14■□□□□ 0.81
HMGN1-217ENST00000489072 FAM172BPA6NC97 362 aa20.14■□□□□ 0.81
HMGN1-217ENST00000489072 A6NDX4 124 aa20.14■□□□□ 0.81
HMGN1-217ENST00000489072 GPX5O75715 221 aa20.14■□□□□ 0.81
HMGN1-217ENST00000489072 KIR2DS4P43632 304 aa20.14■□□□□ 0.81
HMGN1-217ENST00000489072 C17orf58Q2M2W7 97 aa20.14■□□□□ 0.81
HMGN1-217ENST00000489072 TMEM219Q86XT9 240 aa20.14■□□□□ 0.81
HMGN1-217ENST00000489072 ABHD12Q8N2K0 398 aa20.14■□□□□ 0.81
HMGN1-217ENST00000489072 NDNFQ8TB73 568 aa20.14■□□□□ 0.81
HMGN1-217ENST00000489072 NRG4Q8WWG1 115 aa20.14■□□□□ 0.81
HMGN1-217ENST00000489072 OR14A2Q96R54 314 aa20.14■□□□□ 0.81
HMGN1-217ENST00000489072 RANBP3Q9H6Z4 567 aaPredicted RBP20.14■□□□□ 0.81
HMGN1-217ENST00000489072 TCF7L1Q9HCS4 588 aa20.14■□□□□ 0.81
HMGN1-217ENST00000489072 ABCB10Q9NRK6 738 aa20.14■□□□□ 0.81
HMGN1-217ENST00000489072 IL36GQ9NZH8 169 aa20.14■□□□□ 0.81
HMGN1-217ENST00000489072 NOTCH1P46531 2555 aa20.13■□□□□ 0.81
HMGN1-217ENST00000489072 CGB3P0DN86 165 aa20.13■□□□□ 0.81
HMGN1-217ENST00000489072 CGB7P0DN87 165 aa20.13■□□□□ 0.81
HMGN1-217ENST00000489072 DYNLT3P51808 116 aa20.13■□□□□ 0.81
HMGN1-217ENST00000489072 EFNB2P52799 333 aa20.13■□□□□ 0.81
HMGN1-217ENST00000489072 WNT4P56705 351 aa20.13■□□□□ 0.81
HMGN1-217ENST00000489072 TAS2R43P59537 309 aa20.13■□□□□ 0.81
HMGN1-217ENST00000489072 SLC34A1Q06495 639 aa20.13■□□□□ 0.81
HMGN1-217ENST00000489072 UTF1Q5T230 341 aa20.13■□□□□ 0.81
HMGN1-217ENST00000489072 OR52W1Q6IF63 320 aa20.13■□□□□ 0.81
HMGN1-217ENST00000489072 PLPPR1Q8TBJ4 325 aa20.13■□□□□ 0.81
HMGN1-217ENST00000489072 ZNF184Q99676 751 aaPredicted RBP20.13■□□□□ 0.81
HMGN1-217ENST00000489072 METTL9Q9H1A3 318 aa20.13■□□□□ 0.81
HMGN1-217ENST00000489072 ZNF286AQ9HBT8 521 aa20.13■□□□□ 0.81
HMGN1-217ENST00000489072 KIF25Q9UIL4 384 aa20.13■□□□□ 0.81
HMGN1-217ENST00000489072 A0A1W2PPK0 400 aa20.12■□□□□ 0.81
HMGN1-217ENST00000489072 ZNF729A6NN14 1252 aaPredicted RBP20.12■□□□□ 0.81
HMGN1-217ENST00000489072 MYL12BO14950 172 aa20.12■□□□□ 0.81
HMGN1-217ENST00000489072 FSTP19883 344 aa20.12■□□□□ 0.81
HMGN1-217ENST00000489072 HTR1DP28221 377 aa20.12■□□□□ 0.81
HMGN1-217ENST00000489072 NANOGP1Q8N7R0 232 aa20.12■□□□□ 0.81
HMGN1-217ENST00000489072 OR13A1Q8NGR1 328 aa20.12■□□□□ 0.81
HMGN1-217ENST00000489072 NPFFR1Q9GZQ6 430 aa20.12■□□□□ 0.81
HMGN1-217ENST00000489072 OR6C3Q9NZP0 311 aa20.12■□□□□ 0.81
HMGN1-217ENST00000489072 ST3GAL6Q9Y274 331 aa20.12■□□□□ 0.81
HMGN1-217ENST00000489072 TIMM23O14925 209 aa20.11■□□□□ 0.81
HMGN1-217ENST00000489072 IGLV1-47P01700 117 aa20.11■□□□□ 0.81
HMGN1-217ENST00000489072 CELP19835 753 aa20.11■□□□□ 0.81
HMGN1-217ENST00000489072 CD34P28906 385 aa20.11■□□□□ 0.81
HMGN1-217ENST00000489072 RBM11P57052 281 aaKnown RBP20.11■□□□□ 0.81
HMGN1-217ENST00000489072 BDH1Q02338 343 aa20.11■□□□□ 0.81
HMGN1-217ENST00000489072 NHLRC3Q5JS37 347 aa20.11■□□□□ 0.81
HMGN1-217ENST00000489072 RSBN1Q5VWQ0 802 aaPredicted RBP20.11■□□□□ 0.81
HMGN1-217ENST00000489072 RTN4RL2Q86UN3 420 aa20.11■□□□□ 0.81
HMGN1-217ENST00000489072 OSR2Q8N2R0 312 aa20.11■□□□□ 0.81
HMGN1-217ENST00000489072 OR4D6Q8NGJ1 314 aa20.11■□□□□ 0.81
HMGN1-217ENST00000489072 CDCA4Q9BXL8 241 aa20.11■□□□□ 0.81
HMGN1-217ENST00000489072 MEIKINA0A087WXM9 373 aa20.1■□□□□ 0.81
HMGN1-217ENST00000489072 KBTBD11-OT1A0A1B0GTJ5 212 aa20.1■□□□□ 0.81
HMGN1-217ENST00000489072 A0A1W2PP11 408 aa20.1■□□□□ 0.81
HMGN1-217ENST00000489072 M0QZ24 198 aa20.1■□□□□ 0.81
HMGN1-217ENST00000489072 CD1AP06126 327 aa20.1■□□□□ 0.81
HMGN1-217ENST00000489072 SERPINA2P20848 420 aa20.1■□□□□ 0.81
HMGN1-217ENST00000489072 GLP1RP43220 463 aa20.1■□□□□ 0.81
HMGN1-217ENST00000489072 AQP4P55087 323 aa20.1■□□□□ 0.81
HMGN1-217ENST00000489072 SUMF2Q8NBJ7 301 aa20.1■□□□□ 0.81
HMGN1-217ENST00000489072 DERL3Q96Q80 235 aa20.1■□□□□ 0.81
HMGN1-217ENST00000489072 NCOR1P1Q9H4R4 102 aa20.1■□□□□ 0.81
HMGN1-217ENST00000489072 IFT22Q9H7X7 185 aa20.1■□□□□ 0.81
HMGN1-217ENST00000489072 ZNF702PQ9H963 129 aa20.1■□□□□ 0.81
HMGN1-217ENST00000489072 DPM3Q9P2X0 92 aa20.1■□□□□ 0.81
HMGN1-217ENST00000489072 CKLFQ9UBR5 152 aa20.1■□□□□ 0.81
HMGN1-217ENST00000489072 TET2Q6N021 2002 aaPredicted RBP20.1■□□□□ 0.81
HMGN1-217ENST00000489072 A0A087X0M5 115 aa20.09■□□□□ 0.81
HMGN1-217ENST00000489072 A0A1B0GX30 115 aa20.09■□□□□ 0.81
HMGN1-217ENST00000489072 F2RL2O00254 374 aa20.09■□□□□ 0.81
HMGN1-217ENST00000489072 GEMIN2O14893 280 aaKnown RBP20.09■□□□□ 0.81
HMGN1-217ENST00000489072 PIN1P1O15428 100 aa20.09■□□□□ 0.81
HMGN1-217ENST00000489072 CSTBP04080 98 aaKnown RBP20.09■□□□□ 0.81
HMGN1-217ENST00000489072 CDK1P06493 297 aa20.09■□□□□ 0.81
HMGN1-217ENST00000489072 PAX5Q02548 391 aa20.09■□□□□ 0.81
HMGN1-217ENST00000489072 C6orf141Q5SZD1 244 aa20.09■□□□□ 0.81
HMGN1-217ENST00000489072 OR2T6Q8NHC8 308 aa20.09■□□□□ 0.81
HMGN1-217ENST00000489072 ZNF596Q8TC21 504 aa20.09■□□□□ 0.81
HMGN1-217ENST00000489072 SGCDQ92629 289 aa20.09■□□□□ 0.81
HMGN1-217ENST00000489072 KIRREL1Q96J84 757 aa20.09■□□□□ 0.81
HMGN1-217ENST00000489072 S100A13Q99584 98 aa20.09■□□□□ 0.81
HMGN1-217ENST00000489072 DPCDQ9BVM2 203 aaPredicted RBP20.09■□□□□ 0.81
HMGN1-217ENST00000489072 BARHL1Q9BZE3 327 aa20.09■□□□□ 0.81
HMGN1-217ENST00000489072 CALYQ9NYX4 217 aa20.09■□□□□ 0.81
HMGN1-217ENST00000489072 PITPNC1Q9UKF7 332 aa20.09■□□□□ 0.81
HMGN1-217ENST00000489072 FOXJ3Q9UPW0 622 aa20.09■□□□□ 0.81
HMGN1-217ENST00000489072 FAM90A22PA8MWA6 464 aa20.08■□□□□ 0.81
HMGN1-217ENST00000489072 OR7C1O76099 320 aaPredicted RBP20.08■□□□□ 0.81
HMGN1-217ENST00000489072 KCNJ3P48549 501 aa20.08■□□□□ 0.81
HMGN1-217ENST00000489072 HABP2Q14520 560 aaPredicted RBP20.08■□□□□ 0.81
HMGN1-217ENST00000489072 SLC22A6Q4U2R8 563 aa20.08■□□□□ 0.81
HMGN1-217ENST00000489072 MUL1Q969V5 352 aa20.08■□□□□ 0.81
HMGN1-217ENST00000489072 ERGIC3Q9Y282 383 aa20.08■□□□□ 0.81
HMGN1-217ENST00000489072 TRAV39A0A0B4J263 110 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms