RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 FAM90A20PA6NIJ5 464 aa14.61□□□□□ -0.07
HDAC6-231ENST00000488905 FAM90A9PA6NNJ1 464 aa14.61□□□□□ -0.07
HDAC6-231ENST00000488905 FAM90A12PA8MX19 464 aa14.61□□□□□ -0.07
HDAC6-231ENST00000488905 FAM90A5PA8MXJ8 464 aa14.61□□□□□ -0.07
HDAC6-231ENST00000488905 H0YJX3 145 aa14.61□□□□□ -0.07
HDAC6-231ENST00000488905 SULT1B1O43704 296 aa14.61□□□□□ -0.07
HDAC6-231ENST00000488905 ALPLP05186 524 aa14.61□□□□□ -0.07
HDAC6-231ENST00000488905 SNRNP70P08621 437 aaKnown RBP14.61□□□□□ -0.07
HDAC6-231ENST00000488905 FAM90A15PP0C7V4 464 aa14.61□□□□□ -0.07
HDAC6-231ENST00000488905 FAM90A13PP0C7W8 464 aa14.61□□□□□ -0.07
HDAC6-231ENST00000488905 FAM90A14PP0C7W9 464 aa14.61□□□□□ -0.07
HDAC6-231ENST00000488905 FAM90A24PP0C7X0 464 aa14.61□□□□□ -0.07
HDAC6-231ENST00000488905 TMEM225BP0DP42 221 aa14.61□□□□□ -0.07
HDAC6-231ENST00000488905 DBTP11182 482 aaKnown RBP14.61□□□□□ -0.07
HDAC6-231ENST00000488905 MTNR1BP49286 362 aa14.61□□□□□ -0.07
HDAC6-231ENST00000488905 RASSF2P50749 326 aa14.61□□□□□ -0.07
HDAC6-231ENST00000488905 SNRPGP62308 76 aaKnown RBP14.61□□□□□ -0.07
HDAC6-231ENST00000488905 KISS1Q15726 138 aa14.61□□□□□ -0.07
HDAC6-231ENST00000488905 MEDAGQ5VYS4 303 aa14.61□□□□□ -0.07
HDAC6-231ENST00000488905 C11orf87Q6NUJ2 197 aa14.61□□□□□ -0.07
HDAC6-231ENST00000488905 OR51D1Q8NGF3 324 aa14.61□□□□□ -0.07
HDAC6-231ENST00000488905 OR56B4Q8NH76 319 aa14.61□□□□□ -0.07
HDAC6-231ENST00000488905 HRASLS5Q96KN8 279 aa14.61□□□□□ -0.07
HDAC6-231ENST00000488905 ZNF649Q9BS31 505 aa14.61□□□□□ -0.07
HDAC6-231ENST00000488905 GPR61Q9BZJ8 451 aa14.61□□□□□ -0.07
HDAC6-231ENST00000488905 CALYQ9NYX4 217 aa14.61□□□□□ -0.07
HDAC6-231ENST00000488905 A0A1W2PPI3 338 aa14.6□□□□□ -0.07
HDAC6-231ENST00000488905 J3QR06 171 aa14.6□□□□□ -0.07
HDAC6-231ENST00000488905 IL1AP01583 271 aa14.6□□□□□ -0.07
HDAC6-231ENST00000488905 CGB3P0DN86 165 aa14.6□□□□□ -0.07
HDAC6-231ENST00000488905 CGB7P0DN87 165 aa14.6□□□□□ -0.07
HDAC6-231ENST00000488905 HOXD3P31249 432 aaPredicted RBP14.6□□□□□ -0.07
HDAC6-231ENST00000488905 PAN3Q58A45 887 aaKnown RBP14.6□□□□□ -0.07
HDAC6-231ENST00000488905 THNSL2Q86YJ6 484 aa14.6□□□□□ -0.07
HDAC6-231ENST00000488905 MRPL41Q8IXM3 137 aaKnown RBP14.6□□□□□ -0.07
HDAC6-231ENST00000488905 OR13A1Q8NGR1 328 aa14.6□□□□□ -0.07
HDAC6-231ENST00000488905 DPF1Q92782 380 aa14.6□□□□□ -0.07
HDAC6-231ENST00000488905 MRPL48Q96GC5 212 aaKnown RBP14.6□□□□□ -0.07
HDAC6-231ENST00000488905 ALG8Q9BVK2 526 aa14.6□□□□□ -0.07
HDAC6-231ENST00000488905 KIF25Q9UIL4 384 aa14.6□□□□□ -0.07
HDAC6-231ENST00000488905 EXOGQ9Y2C4 368 aaKnown RBP14.6□□□□□ -0.07
HDAC6-231ENST00000488905 ORC6Q9Y5N6 252 aa14.6□□□□□ -0.07
HDAC6-231ENST00000488905 MEIKINA0A087WXM9 373 aa14.59□□□□□ -0.07
HDAC6-231ENST00000488905 IGHV3-7P01780 117 aa14.59□□□□□ -0.07
HDAC6-231ENST00000488905 RPL23AP62750 156 aaKnown RBP14.59□□□□□ -0.07
HDAC6-231ENST00000488905 ZNF691Q5VV52 312 aa14.59□□□□□ -0.07
HDAC6-231ENST00000488905 LPCAT4Q643R3 524 aa14.59□□□□□ -0.07
HDAC6-231ENST00000488905 ELP2Q6IA86 826 aa14.59□□□□□ -0.07
HDAC6-231ENST00000488905 ZNF329Q86UD4 541 aa14.59□□□□□ -0.07
HDAC6-231ENST00000488905 SERPINA12Q8IW75 414 aa14.59□□□□□ -0.07
HDAC6-231ENST00000488905 PARP16Q8N5Y8 322 aa14.59□□□□□ -0.07
HDAC6-231ENST00000488905 DRAM1Q8N682 238 aa14.59□□□□□ -0.07
HDAC6-231ENST00000488905 C5orf56Q8N8D9 126 aa14.59□□□□□ -0.07
HDAC6-231ENST00000488905 ZNF565Q8N9K5 539 aa14.59□□□□□ -0.07
HDAC6-231ENST00000488905 OR5D14Q8NGL3 314 aa14.59□□□□□ -0.07
HDAC6-231ENST00000488905 LEAP2Q969E1 77 aa14.59□□□□□ -0.07
HDAC6-231ENST00000488905 LGALS12Q96DT0 336 aa14.59□□□□□ -0.07
HDAC6-231ENST00000488905 NCOR1P1Q9H4R4 102 aa14.59□□□□□ -0.07
HDAC6-231ENST00000488905 IDI2-AS1Q9NZ38 188 aa14.59□□□□□ -0.07
HDAC6-231ENST00000488905 TRAV24A0A0B4J272 114 aa14.58□□□□□ -0.08
HDAC6-231ENST00000488905 TMEM212A6NML5 194 aa14.58□□□□□ -0.08
HDAC6-231ENST00000488905 SNTNA6NMZ2 147 aa14.58□□□□□ -0.08
HDAC6-231ENST00000488905 E9PQ18 207 aa14.58□□□□□ -0.08
HDAC6-231ENST00000488905 EI24O14681 340 aa14.58□□□□□ -0.08
HDAC6-231ENST00000488905 ZFPL1O95159 310 aa14.58□□□□□ -0.08
HDAC6-231ENST00000488905 TMEM11P17152 192 aa14.58□□□□□ -0.08
HDAC6-231ENST00000488905 MADCAM1Q13477 382 aa14.58□□□□□ -0.08
HDAC6-231ENST00000488905 GALEQ14376 348 aa14.58□□□□□ -0.08
HDAC6-231ENST00000488905 HES1Q14469 280 aa14.58□□□□□ -0.08
HDAC6-231ENST00000488905 IL13RA2Q14627 380 aa14.58□□□□□ -0.08
HDAC6-231ENST00000488905 ZSCAN26Q16670 478 aa14.58□□□□□ -0.08
HDAC6-231ENST00000488905 DEFB121Q5J5C9 76 aa14.58□□□□□ -0.08
HDAC6-231ENST00000488905 OR2W3Q7Z3T1 314 aa14.58□□□□□ -0.08
HDAC6-231ENST00000488905 SYS1Q8N2H4 156 aa14.58□□□□□ -0.08
HDAC6-231ENST00000488905 PXT1Q8NFP0 134 aa14.58□□□□□ -0.08
HDAC6-231ENST00000488905 CNIH3Q8TBE1 160 aa14.58□□□□□ -0.08
HDAC6-231ENST00000488905 CHPT1Q8WUD6 406 aa14.58□□□□□ -0.08
HDAC6-231ENST00000488905 TSEN15Q8WW01 171 aaKnown RBP14.58□□□□□ -0.08
HDAC6-231ENST00000488905 CPNE2Q96FN4 548 aaPredicted RBP14.58□□□□□ -0.08
HDAC6-231ENST00000488905 NOL4LQ96MY1 436 aaPredicted RBP14.58□□□□□ -0.08
HDAC6-231ENST00000488905 NR1H4Q96RI1 486 aaPredicted RBP14.58□□□□□ -0.08
HDAC6-231ENST00000488905 MYCBPQ99417 103 aaPredicted RBP14.58□□□□□ -0.08
HDAC6-231ENST00000488905 LINC00574Q9H8X3 128 aa14.58□□□□□ -0.08
HDAC6-231ENST00000488905 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.58□□□□□ -0.08
HDAC6-231ENST00000488905 DHDHQ9UQ10 334 aa14.58□□□□□ -0.08
HDAC6-231ENST00000488905 PSG11Q9UQ72 335 aa14.58□□□□□ -0.08
HDAC6-231ENST00000488905 FGF16O43320 207 aa14.57□□□□□ -0.08
HDAC6-231ENST00000488905 CIB2O75838 187 aa14.57□□□□□ -0.08
HDAC6-231ENST00000488905 ATP5HO75947 161 aa14.57□□□□□ -0.08
HDAC6-231ENST00000488905 RPSAP08865 295 aaKnown RBP14.57□□□□□ -0.08
HDAC6-231ENST00000488905 C21orf33P30042 268 aaPredicted RBP14.57□□□□□ -0.08
HDAC6-231ENST00000488905 SSTR5P35346 364 aa14.57□□□□□ -0.08
HDAC6-231ENST00000488905 THBS3P49746 956 aa14.57□□□□□ -0.08
HDAC6-231ENST00000488905 GNG10P50151 68 aa14.57□□□□□ -0.08
HDAC6-231ENST00000488905 RAB7AP51149 207 aa14.57□□□□□ -0.08
HDAC6-231ENST00000488905 PAX5Q02548 391 aa14.57□□□□□ -0.08
HDAC6-231ENST00000488905 DIAPH2-AS1Q14236 149 aa14.57□□□□□ -0.08
HDAC6-231ENST00000488905 LTC4SQ16873 150 aa14.57□□□□□ -0.08
HDAC6-231ENST00000488905 RSBN1Q5VWQ0 802 aaPredicted RBP14.57□□□□□ -0.08
HDAC6-231ENST00000488905 LHFPL3Q86UP9 236 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms