RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 PTX4Q96A99 478 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 RBM24Q9BX46 236 aaKnown RBP14.07□□□□□ -0.16
MCF2L-229ENST00000488765 GPR84Q9NQS5 396 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 ZDBF2Q9HCK1 2354 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 FREM2Q5SZK8 3169 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 LILRA1O75019 489 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 TMEM50AO95807 157 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 ZNF728P0DKX0 622 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 DUSP1P28562 367 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 TMEM267Q0VDI3 215 aaPredicted RBP14.07□□□□□ -0.16
MCF2L-229ENST00000488765 ATOH7Q8N100 152 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 TMEM252Q8N6L7 170 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 GATAD1Q8WUU5 269 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 RERGQ96A58 199 aaPredicted RBP14.07□□□□□ -0.16
MCF2L-229ENST00000488765 IMMP2LQ96T52 175 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 MIEN1Q9BRT3 115 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 ZPBPQ9BS86 351 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 APOOQ9BUR5 198 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 PRSS50Q9UI38 385 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 ZNF407Q9C0G0 2248 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 KIR2DL5BA0A0G2JN68 375 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 KIR2DL5BA0A0G2JPC4 375 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 PFN1P07737 140 aaKnown RBP14.07□□□□□ -0.16
MCF2L-229ENST00000488765 OR5G3P0C626 314 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 DEFA4P12838 97 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 TAS2R46P59540 309 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 ZNF266Q14584 549 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 SPIN3Q5JUX0 258 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 ZNF776Q68DI1 518 aaPredicted RBP14.07□□□□□ -0.16
MCF2L-229ENST00000488765 KIR2DL5AQ8N109 375 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 DNASE2BQ8WZ79 361 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 VSTM2LQ96N03 204 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 WWTR1Q9GZV5 400 aa14.07□□□□□ -0.16
MCF2L-229ENST00000488765 LOC102723971A0A1B0GUV8 181 aa14.06□□□□□ -0.16
MCF2L-229ENST00000488765 NDUFB8O95169 186 aa14.06□□□□□ -0.16
MCF2L-229ENST00000488765 CNN1P51911 297 aaKnown RBP14.06□□□□□ -0.16
MCF2L-229ENST00000488765 RPS15AP62244 130 aaKnown RBP14.06□□□□□ -0.16
MCF2L-229ENST00000488765 RPS21P63220 83 aaKnown RBP14.06□□□□□ -0.16
MCF2L-229ENST00000488765 HSF1Q00613 529 aa14.06□□□□□ -0.16
MCF2L-229ENST00000488765 HYAL1Q12794 435 aa14.06□□□□□ -0.16
MCF2L-229ENST00000488765 TMEM187Q14656 261 aa14.06□□□□□ -0.16
MCF2L-229ENST00000488765 FIGLAQ6QHK4 219 aa14.06□□□□□ -0.16
MCF2L-229ENST00000488765 OR51G1Q8NGK1 321 aa14.06□□□□□ -0.16
MCF2L-229ENST00000488765 C1orf147Q96MC9 270 aaPredicted RBP14.06□□□□□ -0.16
MCF2L-229ENST00000488765 HSPB9Q9BQS6 159 aa14.06□□□□□ -0.16
MCF2L-229ENST00000488765 ALKBH7Q9BT30 221 aaPredicted RBP14.06□□□□□ -0.16
MCF2L-229ENST00000488765 P4HTMQ9NXG6 502 aa14.06□□□□□ -0.16
MCF2L-229ENST00000488765 MTCH2Q9Y6C9 303 aa14.06□□□□□ -0.16
MCF2L-229ENST00000488765 UMODP07911 640 aa14.06□□□□□ -0.16
MCF2L-229ENST00000488765 S100A7AQ86SG5 101 aa14.06□□□□□ -0.16
MCF2L-229ENST00000488765 OIT3Q8WWZ8 545 aa14.06□□□□□ -0.16
MCF2L-229ENST00000488765 OR1E3Q8WZA6 343 aa14.06□□□□□ -0.16
MCF2L-229ENST00000488765 ZNF845Q96IR2 970 aaPredicted RBP14.06□□□□□ -0.16
MCF2L-229ENST00000488765 SLC35E1Q96K37 410 aa14.06□□□□□ -0.16
MCF2L-229ENST00000488765 VAMP8Q9BV40 100 aa14.06□□□□□ -0.16
MCF2L-229ENST00000488765 PECRQ9BY49 303 aa14.06□□□□□ -0.16
MCF2L-229ENST00000488765 TRBV11-1A0A0K0K1C0 115 aa14.05□□□□□ -0.16
MCF2L-229ENST00000488765 FAM78BQ5VT40 261 aa14.05□□□□□ -0.16
MCF2L-229ENST00000488765 CARD17Q5XLA6 110 aa14.05□□□□□ -0.16
MCF2L-229ENST00000488765 BTF3L4Q96K17 158 aa14.05□□□□□ -0.16
MCF2L-229ENST00000488765 HDAC8Q9BY41 377 aa14.05□□□□□ -0.16
MCF2L-229ENST00000488765 SLC2A9Q9NRM0 540 aa14.05□□□□□ -0.16
MCF2L-229ENST00000488765 NTSR1P30989 418 aa14.05□□□□□ -0.16
MCF2L-229ENST00000488765 RABIFP47224 123 aa14.05□□□□□ -0.16
MCF2L-229ENST00000488765 KRTDAPP60985 99 aa14.05□□□□□ -0.16
MCF2L-229ENST00000488765 TMPRSS7Q7RTY8 843 aa14.05□□□□□ -0.16
MCF2L-229ENST00000488765 OR5AS1Q8N127 324 aa14.05□□□□□ -0.16
MCF2L-229ENST00000488765 PTPMT1Q8WUK0 201 aaPredicted RBP14.05□□□□□ -0.16
MCF2L-229ENST00000488765 CTHRC1Q96CG8 243 aa14.05□□□□□ -0.16
MCF2L-229ENST00000488765 SLAMF6Q96DU3 332 aa14.05□□□□□ -0.16
MCF2L-229ENST00000488765 RPH3ALQ9UNE2 315 aa14.05□□□□□ -0.16
MCF2L-229ENST00000488765 CEACAM18A8MTB9 384 aa14.05□□□□□ -0.16
MCF2L-229ENST00000488765 C5orf67F2Z3F1 127 aa14.05□□□□□ -0.16
MCF2L-229ENST00000488765 PNMTP11086 282 aa14.05□□□□□ -0.16
MCF2L-229ENST00000488765 BSXQ3C1V8 233 aa14.05□□□□□ -0.16
MCF2L-229ENST00000488765 ADAMTSL4Q6UY14 1074 aa14.05□□□□□ -0.16
MCF2L-229ENST00000488765 Q6ZWC4 215 aa14.05□□□□□ -0.16
MCF2L-229ENST00000488765 CADM4Q8NFZ8 388 aa14.05□□□□□ -0.16
MCF2L-229ENST00000488765 CCDC3Q9BQI4 270 aa14.05□□□□□ -0.16
MCF2L-229ENST00000488765 ERRFI1Q9UJM3 462 aaPredicted RBP14.05□□□□□ -0.16
MCF2L-229ENST00000488765 PGPEP1LA6NFU8 196 aa14.04□□□□□ -0.16
MCF2L-229ENST00000488765 PRTGQ2VWP7 1150 aa14.04□□□□□ -0.16
MCF2L-229ENST00000488765 TMEM41BQ5BJD5 291 aa14.04□□□□□ -0.16
MCF2L-229ENST00000488765 SVIPQ8NHG7 77 aa14.04□□□□□ -0.16
MCF2L-229ENST00000488765 ZCCHC14Q8WYQ9 949 aaKnown RBP14.04□□□□□ -0.16
MCF2L-229ENST00000488765 HLA-CQ95604 372 aa14.04□□□□□ -0.16
MCF2L-229ENST00000488765 NAA60Q9H7X0 242 aa14.04□□□□□ -0.16
MCF2L-229ENST00000488765 RNF115Q9Y4L5 304 aa14.04□□□□□ -0.16
MCF2L-229ENST00000488765 SRSF10O75494 262 aaKnown RBP14.04□□□□□ -0.16
MCF2L-229ENST00000488765 BCL2P10415 239 aa14.04□□□□□ -0.16
MCF2L-229ENST00000488765 ZNF141Q15928 474 aa14.04□□□□□ -0.16
MCF2L-229ENST00000488765 TXN2Q99757 166 aa14.04□□□□□ -0.16
MCF2L-229ENST00000488765 TRAPPC1Q9Y5R8 145 aa14.04□□□□□ -0.16
MCF2L-229ENST00000488765 A0A1B0GW64 132 aa14.03□□□□□ -0.16
MCF2L-229ENST00000488765 CHST1O43916 411 aa14.03□□□□□ -0.16
MCF2L-229ENST00000488765 PGCP20142 388 aa14.03□□□□□ -0.16
MCF2L-229ENST00000488765 GALNSP34059 522 aa14.03□□□□□ -0.16
MCF2L-229ENST00000488765 UEVLDQ8IX04 471 aa14.03□□□□□ -0.16
MCF2L-229ENST00000488765 SAXO1Q8IYX7 474 aa14.03□□□□□ -0.16
MCF2L-229ENST00000488765 CA13Q8N1Q1 262 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms