RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 SLC25A4P12235 298 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 HOXC12P31275 282 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 IGFBP7Q16270 282 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 TAF9Q16594 264 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 SWI5Q1ZZU3 235 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 ANKRD55Q3KP44 614 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 PIGYQ3MUY2 71 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 C6orf201Q7Z4U5 140 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 FBXL14Q8N1E6 418 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 OSR2Q8N2R0 312 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 OR5A2Q8NGI9 324 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 SLC25A40Q8TBP6 338 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 MARC2Q969Z3 335 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 RNF126Q9BV68 326 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 OR2J1Q9GZK6 312 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 OBP2BQ9NPH6 170 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 OR2S2Q9NQN1 319 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 MPC1Q9Y5U8 109 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 HEATR1Q9H583 2144 aaKnown RBP10.36□□□□□ -0.75
HDAC6-230ENST00000488543 HIVEP3Q5T1R4 2406 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 ANKRD30BLA7E2S9 258 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 ATXN7O15265 892 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-230ENST00000488543 GLRA1P23415 457 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 NPBWR2P48146 333 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 UCP2P55851 309 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 ARFRP1Q13795 201 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 ZNF345Q14585 488 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 CDSNQ15517 529 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 HOGA1Q86XE5 327 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 CBLN2Q8IUK8 224 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 ZDHHC22Q8N966 263 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 OR5AP2Q8NGF4 316 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 OR10C1Q96KK4 312 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 SLC25A15Q9Y619 301 aa10.36□□□□□ -0.75
HDAC6-230ENST00000488543 IGHV1-18A0A0C4DH31 117 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 SERPINE3A8MV23 424 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 ABCD4O14678 606 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 PSMB6P28072 239 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 CHATP28329 748 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 CCKARP32238 428 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 CASP6P55212 293 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 SUPT4H1P63272 117 aaKnown RBP10.35□□□□□ -0.75
HDAC6-230ENST00000488543 SRSF4Q08170 494 aaKnown RBP10.35□□□□□ -0.75
HDAC6-230ENST00000488543 ALKBH6Q3KRA9 238 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 PAN3Q58A45 887 aaKnown RBP10.35□□□□□ -0.75
HDAC6-230ENST00000488543 CLEC18BQ6UXF7 455 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 SAXO1Q8IYX7 474 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 EIF4E3Q8N5X7 224 aaKnown RBP10.35□□□□□ -0.75
HDAC6-230ENST00000488543 OR13G1Q8NGZ3 307 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 SLAMF9Q96A28 289 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 HDHD3Q9BSH5 251 aaPredicted RBP10.35□□□□□ -0.75
HDAC6-230ENST00000488543 NKX6-2Q9C056 277 aaPredicted RBP10.35□□□□□ -0.75
HDAC6-230ENST00000488543 HSF4Q9ULV5 492 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 AMDHD2Q9Y303 409 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 FAM96BQ9Y3D0 163 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 IGKV1D-8A0A087WSZ0 117 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 GEMIN2O14893 280 aaKnown RBP10.35□□□□□ -0.75
HDAC6-230ENST00000488543 DUS4LO95620 317 aaKnown RBP10.35□□□□□ -0.75
HDAC6-230ENST00000488543 HOXB5P09067 269 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 TBPP20226 339 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 BCL3P20749 454 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 CA6P23280 308 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 CBX5P45973 191 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 HAAOP46952 286 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 UQCRFS1P47985 274 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 RBM11P57052 281 aaKnown RBP10.35□□□□□ -0.75
HDAC6-230ENST00000488543 NKAPLQ5M9Q1 402 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 LPCAT3Q6P1A2 487 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 FAM122CQ6P4D5 195 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 MRGPRGQ86SM5 289 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 BATF2Q8N1L9 274 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 OR1J1Q8NGS3 322 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 EMG1Q92979 244 aaKnown RBP10.35□□□□□ -0.75
HDAC6-230ENST00000488543 HS3ST6Q96QI5 342 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 GSKIPQ9P0R6 139 aa10.35□□□□□ -0.75
HDAC6-230ENST00000488543 PCP4L1A6NKN8 68 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 F8VVB4 439 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 F8VWA3 439 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 RCC1P18754 421 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-230ENST00000488543 AMY2BP19961 511 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 MPV17P39210 176 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 ZNF83P51522 516 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 S100A10P60903 97 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 ARL6IP1Q15041 203 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 FIP1L1Q6UN15 594 aaKnown RBP10.34□□□□□ -0.75
HDAC6-230ENST00000488543 PUSL1Q8N0Z8 303 aaKnown RBP10.34□□□□□ -0.75
HDAC6-230ENST00000488543 FAM169BQ8N8A8 192 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 PIK3IP1Q96FE7 263 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 MARS2Q96GW9 593 aaKnown RBP10.34□□□□□ -0.75
HDAC6-230ENST00000488543 BBC3Q96PG8 261 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-230ENST00000488543 PIGMQ9H3S5 423 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 MTCH1Q9NZJ7 389 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 JKAMPQ9P055 326 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 ST3GAL6Q9Y274 331 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 ROS1P08922 2347 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 OR5B21A6NL26 309 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 DBX1A6NMT0 343 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 IQCF6A8MYZ5 107 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 SYNGR1O43759 233 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 KNG1P01042 644 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms