RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 BTNL10A8MVZ5 291 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 SLC22A1O15245 554 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 HMGB3O15347 200 aaKnown RBP2.32□□□□□ -2.04
RBM28-207ENST00000488249 ORC5O43913 435 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 CCDC22O60826 627 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 SULT1A3P0DMM9 295 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 SULT1A4P0DMN0 295 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 HSD17B1P14061 328 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 CD99P14209 185 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 GABRA1P14867 456 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 ZNF708P17019 499 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 ZNF25P17030 456 aaPredicted RBP2.32□□□□□ -2.04
RBM28-207ENST00000488249 PAX6P26367 422 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 TSPOP30536 169 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 OR1E2P47887 323 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 RND2P52198 227 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 RAB5BP61020 215 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 TBPL1P62380 186 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 DYNLL1P63167 89 aaKnown RBP2.32□□□□□ -2.04
RBM28-207ENST00000488249 SLC35A1P78382 337 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 CDK5Q00535 292 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 BAXQ07812 192 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 ZNF616Q08AN1 781 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 ZNF630Q2M218 657 aaPredicted RBP2.32□□□□□ -2.04
RBM28-207ENST00000488249 ACOT6Q3I5F7 207 aaPredicted RBP2.32□□□□□ -2.04
RBM28-207ENST00000488249 OR2B11Q5JQS5 317 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 OR2T5Q6IEZ7 315 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 OPN5Q6U736 354 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 TOMM20LQ6UXN7 152 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 OAFQ86UD1 273 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 LRRC28Q86X40 367 aaPredicted RBP2.32□□□□□ -2.04
RBM28-207ENST00000488249 DOLPP1Q86YN1 238 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 MUC15Q8N387 334 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 ZFP41Q8N8Y5 198 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 UBAC2Q8NBM4 344 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 OR2T29Q8NH02 315 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 MCFD2Q8NI22 146 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 IL22RA2Q969J5 263 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 TMEM54Q969K7 222 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 TMEM80Q96HE8 168 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 DIRAS2Q96HU8 199 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 DNAJC30Q96LL9 226 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 KCTD14Q9BQ13 255 aaPredicted RBP2.32□□□□□ -2.04
RBM28-207ENST00000488249 RSPO3Q9BXY4 272 aaPredicted RBP2.32□□□□□ -2.04
RBM28-207ENST00000488249 MAP1LC3BQ9GZQ8 125 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 RNF167Q9H6Y7 350 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 SPANXA1Q9NS26 97 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 FAIMQ9NVQ4 179 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 RBM22Q9NW64 420 aaKnown RBP eCLIP2.32□□□□□ -2.04
RBM28-207ENST00000488249 COPZ2Q9P299 210 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 ANXA10Q9UJ72 324 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 RIMS3Q9UJD0 308 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 RAB22AQ9UL26 194 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 POLR1DQ9Y2S0 133 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 WSB1Q9Y6I7 421 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 KIF25-AS1Q9Y6Z4 181 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 SMG6Q86US8 1419 aaKnown RBP2.32□□□□□ -2.04
RBM28-207ENST00000488249 VIRMAQ69YN4 1812 aaKnown RBP2.31□□□□□ -2.04
RBM28-207ENST00000488249 MYH3P11055 1940 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 YLPM1P49750 1951 aaKnown RBP2.31□□□□□ -2.04
RBM28-207ENST00000488249 A0A0G2JLM5 398 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 A0A1B0GWB2 263 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 A0A1W2PRE2 83 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 OR5H1A6NKK0 313 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 ZNF705EA8MWA4 302 aaPredicted RBP2.31□□□□□ -2.04
RBM28-207ENST00000488249 TRAPPC2LH3BP13 241 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 H7C1H1 209 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 FAAHO00519 579 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 MGRN1O60291 552 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 PFN1P07737 140 aaKnown RBP2.31□□□□□ -2.04
RBM28-207ENST00000488249 CSF3P09919 207 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 GKN3PP0CG01 181 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 RBMY1CP0DJD4 496 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 CD37P11049 281 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 CD34P28906 385 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 RPL35P42766 123 aaKnown RBP2.31□□□□□ -2.04
RBM28-207ENST00000488249 RBP2P50120 134 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 AKR1D1P51857 326 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 BIDP55957 195 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 ZNF92Q03936 586 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 EMX2Q04743 252 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 BAMBIQ13145 260 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 NSUN5P1Q3KNT7 163 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 RNASE10Q5GAN6 216 aaKnown RBP2.31□□□□□ -2.04
RBM28-207ENST00000488249 RSBN1Q5VWQ0 802 aaPredicted RBP2.31□□□□□ -2.04
RBM28-207ENST00000488249 TEX36Q5VZQ5 186 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 UNQ9370/PRO34162Q6UXP9 181 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 ALKAL1Q6UXT8 129 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 FAM183BPQ6ZVS7 135 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 MRPL55Q7Z7F7 128 aaKnown RBP2.31□□□□□ -2.04
RBM28-207ENST00000488249 CALHM3Q86XJ0 350 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 SLC22A18ASQ8N1D0 253 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 C1orf158Q8N1D5 194 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 OSR2Q8N2R0 312 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 COX18Q8N8Q8 333 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 OR52E2Q8NGJ4 325 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 OR9I1Q8NGQ6 314 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 OR2A1Q8NGT9 310 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 OR4S2Q8NH73 311 aa2.31□□□□□ -2.04
RBM28-207ENST00000488249 ZNRF2Q8NHG8 242 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms