RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 G3V3Y1 287 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 RPL36A-HNRNPH2H7BZ11 118 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 HIST1H2BKO60814 126 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 TMEM50AO95807 157 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 HIST1H2BJP06899 126 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 HIST1H2BOP23527 126 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 HIST1H2BBP33778 126 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 NTF4P34130 210 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 HIST1H2BDP58876 126 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 HIST1H2BCP62807 126 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 RAC1P63000 192 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 PSG4Q00888 419 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 RUNX1Q01196 453 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 TLE4Q04727 773 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 HIST2H2BEQ16778 126 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 NMSQ5H8A3 153 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.51□□□□□ -0.73
COL3A1-206ENST00000487010 DPPA3Q6W0C5 159 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 SPNS3Q6ZMD2 512 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 ZNF600Q6ZNG1 722 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 ZNF818PQ6ZRF7 136 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 Q6ZS49 121 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 CALHM1Q8IU99 346 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 TMEM217Q8N7C4 229 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 PLPPR1Q8TBJ4 325 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 HIST1H2BHQ93079 126 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 PFDN5Q99471 154 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 HIST1H2BNQ99877 126 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 HIST1H2BMQ99879 126 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 HS3ST3B1Q9Y662 390 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 URGCP-MRPS24S4R325 110 aa10.51□□□□□ -0.73
COL3A1-206ENST00000487010 EYSQ5T1H1 3165 aa10.5□□□□□ -0.73
COL3A1-206ENST00000487010 IGHV5-10-1A0A0J9YXX1 117 aa10.5□□□□□ -0.73
COL3A1-206ENST00000487010 ZNF816-ZNF321PA0A0X1KG74 233 aa10.5□□□□□ -0.73
COL3A1-206ENST00000487010 A0A1W2PQM1 296 aa10.5□□□□□ -0.73
COL3A1-206ENST00000487010 SEC14L6B5MCN3 397 aa10.5□□□□□ -0.73
COL3A1-206ENST00000487010 HBE1P02100 147 aa10.5□□□□□ -0.73
COL3A1-206ENST00000487010 B4GALT1P15291 398 aa10.5□□□□□ -0.73
COL3A1-206ENST00000487010 NPBWR2P48146 333 aa10.5□□□□□ -0.73
COL3A1-206ENST00000487010 RPL23AP62750 156 aaKnown RBP10.5□□□□□ -0.73
COL3A1-206ENST00000487010 KHDC3LQ587J8 217 aa10.5□□□□□ -0.73
COL3A1-206ENST00000487010 C9orf152Q5JTZ5 239 aa10.5□□□□□ -0.73
COL3A1-206ENST00000487010 CMTM1Q8IZ96 169 aa10.5□□□□□ -0.73
COL3A1-206ENST00000487010 GAPTQ8N292 157 aa10.5□□□□□ -0.73
COL3A1-206ENST00000487010 ZNF383Q8NA42 475 aa10.5□□□□□ -0.73
COL3A1-206ENST00000487010 CPT1CQ8TCG5 803 aa10.5□□□□□ -0.73
COL3A1-206ENST00000487010 DNASE2BQ8WZ79 361 aa10.5□□□□□ -0.73
COL3A1-206ENST00000487010 EXTL1Q92935 676 aa10.5□□□□□ -0.73
COL3A1-206ENST00000487010 CPNE4Q96A23 557 aaPredicted RBP10.5□□□□□ -0.73
COL3A1-206ENST00000487010 POM121Q96HA1 1249 aa10.5□□□□□ -0.73
COL3A1-206ENST00000487010 TECTBQ96PL2 329 aa10.5□□□□□ -0.73
COL3A1-206ENST00000487010 LOC102723996A0A087X1L8 192 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 CYB5BO43169 146 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 CHST1O43916 411 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 TK1P04183 234 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 CYC1P08574 325 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 VDAC1P21796 283 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 UCP1P25874 307 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 TAS2R30P59541 319 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 CCL7P80098 99 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 FOXO1Q12778 655 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 IL24Q13007 206 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 SRSF7Q16629 238 aaKnown RBP eCLIP10.49□□□□□ -0.73
COL3A1-206ENST00000487010 TRIM61Q5EBN2 209 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 CDPF1Q6NVV7 123 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 GUSBP11Q6P575 273 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 SLC25A26Q70HW3 274 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 C5orf24Q7Z6I8 188 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 BATF2Q8N1L9 274 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 ZNF611Q8N823 705 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 OR13D1Q8NGV5 346 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 ATP5SQ99766 215 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 OR2H1Q9GZK4 316 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 WNT5BQ9H1J7 359 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 CALHM2Q9HA72 323 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 Q9N2K0 584 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 CABIN1Q9Y6J0 2220 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 SLC22A20A6NK97 555 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 TRGC2P03986 189 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 PAX9P55771 341 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 HLA-DRB3P79483 266 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 ZNF154Q13106 437 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 Q8NFD4 153 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 OR10G4Q8NGN3 311 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 OR10D4PQ8NGN7 298 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 FGFBP3Q8TAT2 258 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 NAT6Q93015 286 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 CCDC74BQ96LY2 380 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 GPHA2Q96T91 129 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 RNF115Q9Y4L5 304 aa10.49□□□□□ -0.73
COL3A1-206ENST00000487010 IGHV1-45A0A0A0MS14 117 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 TRAV1-1A0A0B4J248 108 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 IGKV1D-13A0A0B4J2D9 117 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 CCDC163A0A0D9SF12 145 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 LOC102723971A0A1B0GUV8 181 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 FAM90A10PA6NDY2 464 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 FAM90A18PA6NE21 464 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 FAM90A16PA6NEW6 464 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 FAM90A20PA6NIJ5 464 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 FAM90A8PA6NJQ4 464 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms