RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 SDCBPO00560 298 aaPredicted RBP12.07□□□□□ -0.48
COL9A1-207ENST00000486080 LYNX1P0DP58 116 aa12.07□□□□□ -0.48
COL9A1-207ENST00000486080 OR3A1P47881 315 aa12.07□□□□□ -0.48
COL9A1-207ENST00000486080 MEF2DQ14814 521 aa12.07□□□□□ -0.48
COL9A1-207ENST00000486080 CHRFAM7AQ494W8 412 aa12.07□□□□□ -0.48
COL9A1-207ENST00000486080 RSBN1Q5VWQ0 802 aaPredicted RBP12.07□□□□□ -0.48
COL9A1-207ENST00000486080 ANGPTL6Q8NI99 470 aa12.07□□□□□ -0.48
COL9A1-207ENST00000486080 HPS1Q92902 700 aa12.07□□□□□ -0.48
COL9A1-207ENST00000486080 SPOCK3Q9BQ16 436 aa12.07□□□□□ -0.48
COL9A1-207ENST00000486080 TRAF4Q9BUZ4 470 aaPredicted RBP12.07□□□□□ -0.48
COL9A1-207ENST00000486080 TMEM106BQ9NUM4 274 aa12.07□□□□□ -0.48
COL9A1-207ENST00000486080 FLVCR2Q9UPI3 526 aa12.07□□□□□ -0.48
COL9A1-207ENST00000486080 AKAP6Q13023 2319 aa12.07□□□□□ -0.48
COL9A1-207ENST00000486080 TRAV39A0A0B4J263 110 aa12.07□□□□□ -0.48
COL9A1-207ENST00000486080 IGHV1-69-2A0A0G2JMI3 117 aa12.07□□□□□ -0.48
COL9A1-207ENST00000486080 ZNF497Q6ZNH5 498 aa12.07□□□□□ -0.48
COL9A1-207ENST00000486080 ASCC1Q8N9N2 400 aaKnown RBP12.07□□□□□ -0.48
COL9A1-207ENST00000486080 OR5AP2Q8NGF4 316 aa12.07□□□□□ -0.48
COL9A1-207ENST00000486080 OR5H2Q8NGV7 314 aa12.07□□□□□ -0.48
COL9A1-207ENST00000486080 CCDC107Q8WV48 283 aa12.07□□□□□ -0.48
COL9A1-207ENST00000486080 MARVELD1Q9BSK0 173 aa12.07□□□□□ -0.48
COL9A1-207ENST00000486080 SHARPINQ9H0F6 387 aa12.07□□□□□ -0.48
COL9A1-207ENST00000486080 Q9N2K0 584 aa12.07□□□□□ -0.48
COL9A1-207ENST00000486080 ANXA10Q9UJ72 324 aa12.07□□□□□ -0.48
COL9A1-207ENST00000486080 EDARQ9UNE0 448 aa12.07□□□□□ -0.48
COL9A1-207ENST00000486080 A0A0B4J293 547 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 A0A1B0GW55 424 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 OOEPA6NGQ2 149 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 ZNF737O75373 536 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 LY6HO94772 140 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 GYPAP02724 150 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 DUX4L2P0CJ85 424 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 DUX4L3P0CJ86 424 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 DUX4L4P0CJ87 422 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 DUX4L5P0CJ88 424 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 DUX4L6P0CJ89 424 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 DUX4L7P0CJ90 424 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 TBPP20226 339 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 COL8A2P25067 703 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 MDH2P40926 338 aaKnown RBP12.06□□□□□ -0.48
COL9A1-207ENST00000486080 AESQ08117 197 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 SCGB2B2Q4G0G5 96 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 SHEQ5VZ18 495 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 TEX36Q5VZQ5 186 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 STUMQ69YW2 141 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 DUX4L9Q6RFH8 374 aaPredicted RBP12.06□□□□□ -0.48
COL9A1-207ENST00000486080 IDO2Q6ZQW0 420 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 BTN2A1Q7KYR7 527 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 CREB3L1Q96BA8 519 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 ZNF286AQ9HBT8 521 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 COPZ2Q9P299 210 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 DUX4Q9UBX2 424 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 NUBP2Q9Y5Y2 271 aa12.06□□□□□ -0.48
COL9A1-207ENST00000486080 DISC1C4P0D8 188 aa12.05□□□□□ -0.48
COL9A1-207ENST00000486080 INMT-MINDY4F8WBC2 141 aa12.05□□□□□ -0.48
COL9A1-207ENST00000486080 NDUFB6O95139 128 aa12.05□□□□□ -0.48
COL9A1-207ENST00000486080 IFNA6P05013 189 aa12.05□□□□□ -0.48
COL9A1-207ENST00000486080 GSTT2P0CG29 244 aa12.05□□□□□ -0.48
COL9A1-207ENST00000486080 SELLP14151 372 aa12.05□□□□□ -0.48
COL9A1-207ENST00000486080 RCC1P18754 421 aaPredicted RBP12.05□□□□□ -0.48
COL9A1-207ENST00000486080 OR3A3P47888 321 aa12.05□□□□□ -0.48
COL9A1-207ENST00000486080 TAS2R46P59540 309 aa12.05□□□□□ -0.48
COL9A1-207ENST00000486080 ARPC4P59998 168 aa12.05□□□□□ -0.48
COL9A1-207ENST00000486080 ACTBL2Q562R1 376 aa12.05□□□□□ -0.48
COL9A1-207ENST00000486080 VAX1Q5SQQ9 334 aa12.05□□□□□ -0.48
COL9A1-207ENST00000486080 GAPTQ8N292 157 aa12.05□□□□□ -0.48
COL9A1-207ENST00000486080 ZNRF1Q8ND25 227 aa12.05□□□□□ -0.48
COL9A1-207ENST00000486080 CCL13Q99616 98 aa12.05□□□□□ -0.48
COL9A1-207ENST00000486080 GINS4Q9BRT9 223 aa12.05□□□□□ -0.48
COL9A1-207ENST00000486080 C20orf85Q9H1P6 137 aa12.05□□□□□ -0.48
COL9A1-207ENST00000486080 RIMS4Q9H426 269 aaPredicted RBP12.05□□□□□ -0.48
COL9A1-207ENST00000486080 SEBOXQ9HB31 216 aaPredicted RBP12.05□□□□□ -0.48
COL9A1-207ENST00000486080 EHFQ9NZC4 300 aa12.05□□□□□ -0.48
COL9A1-207ENST00000486080 MAB21L2Q9Y586 359 aa12.05□□□□□ -0.48
COL9A1-207ENST00000486080 USF3Q68DE3 2245 aa12.05□□□□□ -0.48
COL9A1-207ENST00000486080 TRBV6-6A0A0A6YYG2 114 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 LGALS8O00214 317 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 MUC1P15941 1255 aaPredicted RBP12.04□□□□□ -0.48
COL9A1-207ENST00000486080 CDK10Q15131 360 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 GRK1Q15835 563 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 CARTPTQ16568 116 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 ZNF880Q6PDB4 577 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 OVCH2Q7RTZ1 564 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 C1orf87Q8N0U7 546 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 OR13C8Q8NGS7 320 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 MRGPRFQ96AM1 343 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 COQ2Q96H96 371 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 RAB1BQ9H0U4 201 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 PPIAL4EA0A075B759 164 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 CLEC18AA5D8T8 446 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 PPIAL4DF5H284 164 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 ARPC1BO15143 372 aaKnown RBP12.04□□□□□ -0.48
COL9A1-207ENST00000486080 SCTP09683 121 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 H2AFB2P0C5Z0 115 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 PPIAL4FP0DN26 164 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 CDKN1AP38936 164 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 RBMS2Q15434 407 aaKnown RBP12.04□□□□□ -0.48
COL9A1-207ENST00000486080 HFEQ30201 348 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 IGSF11Q5DX21 431 aa12.04□□□□□ -0.48
COL9A1-207ENST00000486080 CLEC18BQ6UXF7 455 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms