RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 YIF1BQ5BJH7 314 aa14.26□□□□□ -0.13
COL6A1-204ENST00000486023 ELP2Q6IA86 826 aa14.26□□□□□ -0.13
COL6A1-204ENST00000486023 TFAP2CQ92754 450 aa14.26□□□□□ -0.13
COL6A1-204ENST00000486023 ZNF184Q99676 751 aaPredicted RBP14.26□□□□□ -0.13
COL6A1-204ENST00000486023 BARHL1Q9BZE3 327 aa14.26□□□□□ -0.13
COL6A1-204ENST00000486023 ZNF581Q9P0T4 197 aa14.26□□□□□ -0.13
COL6A1-204ENST00000486023 KIF25Q9UIL4 384 aa14.26□□□□□ -0.13
COL6A1-204ENST00000486023 ST3GAL6Q9Y274 331 aa14.26□□□□□ -0.13
COL6A1-204ENST00000486023 ERGIC3Q9Y282 383 aa14.26□□□□□ -0.13
COL6A1-204ENST00000486023 TRAV8-7A0A075B6U6 113 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 TRBV5-5A0A0J9YX44 114 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 MAGEA13PA6NCF6 341 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 M0QZ24 198 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 VSIG10L2P0DP72 767 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 CD24P25063 80 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 WNT4P56705 351 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 TAS2R43P59537 309 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 SLC22A6Q4U2R8 563 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 ARSJQ5FYB0 599 aaPredicted RBP14.25□□□□□ -0.13
COL6A1-204ENST00000486023 ATAD3CQ5T2N8 411 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 OR52W1Q6IF63 320 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 CCBE1Q6UXH8 406 aaPredicted RBP14.25□□□□□ -0.13
COL6A1-204ENST00000486023 HEPN1Q6WQI6 88 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 OSR2Q8N2R0 312 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 JAGN1Q8N5M9 183 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 ZNF565Q8N9K5 539 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 ZNF485Q8NCK3 441 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 OR2T6Q8NHC8 308 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 CORO2AQ92828 525 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 PGLYRP3Q96LB9 341 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 NPFFR1Q9GZQ6 430 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 PLCXD1Q9NUJ7 323 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 TAS2R3Q9NYW6 316 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 OR6C3Q9NZP0 311 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 FBLN5Q9UBX5 448 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 FOXJ3Q9UPW0 622 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 TCF19Q9Y242 345 aa14.25□□□□□ -0.13
COL6A1-204ENST00000486023 A0A1W2PP11 408 aa14.24□□□□□ -0.13
COL6A1-204ENST00000486023 GEMIN2O14893 280 aaKnown RBP14.24□□□□□ -0.13
COL6A1-204ENST00000486023 TIMM23O14925 209 aa14.24□□□□□ -0.13
COL6A1-204ENST00000486023 AQP4P55087 323 aa14.24□□□□□ -0.13
COL6A1-204ENST00000486023 RPS11P62280 158 aaKnown RBP eCLIP14.24□□□□□ -0.13
COL6A1-204ENST00000486023 HABP2Q14520 560 aaPredicted RBP14.24□□□□□ -0.13
COL6A1-204ENST00000486023 IL13RA2Q14627 380 aa14.24□□□□□ -0.13
COL6A1-204ENST00000486023 MINOS1Q5TGZ0 78 aa14.24□□□□□ -0.13
COL6A1-204ENST00000486023 NANOGP1Q8N7R0 232 aa14.24□□□□□ -0.13
COL6A1-204ENST00000486023 SUMF2Q8NBJ7 301 aa14.24□□□□□ -0.13
COL6A1-204ENST00000486023 OR51T1Q8NGJ9 327 aa14.24□□□□□ -0.13
COL6A1-204ENST00000486023 OR13A1Q8NGR1 328 aa14.24□□□□□ -0.13
COL6A1-204ENST00000486023 RFESDQ8TAC1 157 aa14.24□□□□□ -0.13
COL6A1-204ENST00000486023 PLPPR1Q8TBJ4 325 aa14.24□□□□□ -0.13
COL6A1-204ENST00000486023 MRGPRDQ8TDS7 321 aa14.24□□□□□ -0.13
COL6A1-204ENST00000486023 NEK7Q8TDX7 302 aa14.24□□□□□ -0.13
COL6A1-204ENST00000486023 NRG4Q8WWG1 115 aa14.24□□□□□ -0.13
COL6A1-204ENST00000486023 MUL1Q969V5 352 aa14.24□□□□□ -0.13
COL6A1-204ENST00000486023 OR5M11Q96RB7 305 aa14.24□□□□□ -0.13
COL6A1-204ENST00000486023 DPCDQ9BVM2 203 aaPredicted RBP14.24□□□□□ -0.13
COL6A1-204ENST00000486023 ZNF286AQ9HBT8 521 aa14.24□□□□□ -0.13
COL6A1-204ENST00000486023 MINOS1-NBL1R4GNA1 71 aa14.24□□□□□ -0.13
COL6A1-204ENST00000486023 ZNF729A6NN14 1252 aaPredicted RBP14.23□□□□□ -0.13
COL6A1-204ENST00000486023 VGLL3A8MV65 326 aa14.23□□□□□ -0.13
COL6A1-204ENST00000486023 CSN2P05814 226 aa14.23□□□□□ -0.13
COL6A1-204ENST00000486023 IGFBP3P17936 291 aaPredicted RBP14.23□□□□□ -0.13
COL6A1-204ENST00000486023 KIR2DS4P43632 304 aa14.23□□□□□ -0.13
COL6A1-204ENST00000486023 DOC2BQ14184 412 aa14.23□□□□□ -0.13
COL6A1-204ENST00000486023 C17orf58Q2M2W7 97 aa14.23□□□□□ -0.13
COL6A1-204ENST00000486023 C6orf141Q5SZD1 244 aa14.23□□□□□ -0.13
COL6A1-204ENST00000486023 ASCL4Q6XD76 172 aa14.23□□□□□ -0.13
COL6A1-204ENST00000486023 OR4P4Q8NGL7 312 aa14.23□□□□□ -0.13
COL6A1-204ENST00000486023 ZNF596Q8TC21 504 aa14.23□□□□□ -0.13
COL6A1-204ENST00000486023 LEAP2Q969E1 77 aa14.23□□□□□ -0.13
COL6A1-204ENST00000486023 CDCA4Q9BXL8 241 aa14.23□□□□□ -0.13
COL6A1-204ENST00000486023 PAK1IP1Q9NWT1 392 aaPredicted RBP14.23□□□□□ -0.13
COL6A1-204ENST00000486023 SCN3BQ9NY72 215 aa14.23□□□□□ -0.13
COL6A1-204ENST00000486023 DPM3Q9P2X0 92 aa14.23□□□□□ -0.13
COL6A1-204ENST00000486023 PITPNC1Q9UKF7 332 aa14.23□□□□□ -0.13
COL6A1-204ENST00000486023 MRPS28Q9Y2Q9 187 aaKnown RBP14.23□□□□□ -0.13
COL6A1-204ENST00000486023 KBTBD11-OT1A0A1B0GTJ5 212 aa14.22□□□□□ -0.13
COL6A1-204ENST00000486023 A6NDX4 124 aa14.22□□□□□ -0.13
COL6A1-204ENST00000486023 PEX14O75381 377 aa14.22□□□□□ -0.13
COL6A1-204ENST00000486023 PRRX1P54821 245 aa14.22□□□□□ -0.13
COL6A1-204ENST00000486023 UTF1Q5T230 341 aa14.22□□□□□ -0.13
COL6A1-204ENST00000486023 GLIPR1L1Q6UWM5 242 aa14.22□□□□□ -0.13
COL6A1-204ENST00000486023 LIAT1Q6ZQX7 453 aa14.22□□□□□ -0.13
COL6A1-204ENST00000486023 Q6ZTK2 550 aa14.22□□□□□ -0.13
COL6A1-204ENST00000486023 RTN4RL2Q86UN3 420 aa14.22□□□□□ -0.13
COL6A1-204ENST00000486023 KLHDC1Q8N7A1 406 aa14.22□□□□□ -0.13
COL6A1-204ENST00000486023 FAM110DQ8TAY7 271 aaPredicted RBP14.22□□□□□ -0.13
COL6A1-204ENST00000486023 FBLIM1Q8WUP2 373 aa14.22□□□□□ -0.13
COL6A1-204ENST00000486023 CCDC107Q8WV48 283 aa14.22□□□□□ -0.13
COL6A1-204ENST00000486023 SGCDQ92629 289 aa14.22□□□□□ -0.13
COL6A1-204ENST00000486023 MYDGFQ969H8 173 aa14.22□□□□□ -0.13
COL6A1-204ENST00000486023 TMED9Q9BVK6 235 aa14.22□□□□□ -0.13
COL6A1-204ENST00000486023 PCDHB16Q9NRJ7 776 aa14.22□□□□□ -0.13
COL6A1-204ENST00000486023 CALYQ9NYX4 217 aa14.22□□□□□ -0.13
COL6A1-204ENST00000486023 TRBV5-7A0A0A0MS05 114 aa14.21□□□□□ -0.13
COL6A1-204ENST00000486023 LEUTXA8MZ59 168 aa14.21□□□□□ -0.13
COL6A1-204ENST00000486023 H3BUI4 141 aa14.21□□□□□ -0.13
COL6A1-204ENST00000486023 CDK1P06493 297 aa14.21□□□□□ -0.13
COL6A1-204ENST00000486023 GTF2F2P13984 249 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms