RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 C10orf107Q8IVU9 208 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 EIF4E3Q8N5X7 224 aaKnown RBP1.23□□□□□ -2.21
GCFC2-209ENST00000486016 LY6G5BQ8NDX9 201 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 OR2Y1Q8NGV0 311 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 MUC7Q8TAX7 377 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 CMTM2Q8TAZ6 248 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 TMEM239Q8WW34 195 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 UBE2WQ96B02 151 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 TMIGD2Q96BF3 282 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 C19orf60Q96EN9 201 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 CATSPER2Q96P56 530 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 APOL4Q9BPW4 351 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 SUCNR1Q9BXA5 334 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 MFSD1Q9H3U5 465 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 GOLPH3Q9H4A6 298 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 IFT46Q9NQC8 304 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 MAT2BQ9NZL9 334 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 MRM2Q9UI43 246 aaKnown RBP1.23□□□□□ -2.21
GCFC2-209ENST00000486016 ZNF443Q9Y2A4 671 aaPredicted RBP1.23□□□□□ -2.21
GCFC2-209ENST00000486016 POFUT2Q9Y2G5 429 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 USH1CQ9Y6N9 552 aa1.23□□□□□ -2.21
GCFC2-209ENST00000486016 POLR3AO14802 1390 aaPredicted RBP1.22□□□□□ -2.21
GCFC2-209ENST00000486016 NACADO15069 1562 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 IGHV2-26A0A0B4J1V2 119 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 ZNF879B4DU55 563 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 F8VP50 259 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 UBDO15205 165 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 TCF21O43680 179 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 SYNGR2O43760 224 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 PSIP1O75475 530 aaKnown RBP1.22□□□□□ -2.21
GCFC2-209ENST00000486016 CA2P00918 260 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 CD99P14209 185 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 ZNF708P17019 499 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 S100A2P29034 98 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 RPA3P35244 121 aaPredicted RBP1.22□□□□□ -2.21
GCFC2-209ENST00000486016 AQP5P55064 265 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 HADHBP55084 474 aaKnown RBP1.22□□□□□ -2.21
GCFC2-209ENST00000486016 CD164Q04900 197 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 PRDX1Q06830 199 aaKnown RBP1.22□□□□□ -2.21
GCFC2-209ENST00000486016 DHRS2Q13268 280 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 STX3Q13277 289 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 GOLGA7BQ2TAP0 167 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 BSXQ3C1V8 233 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 ELP2Q6IA86 826 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 LAIR2Q6ISS4 152 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 AHSA2Q719I0 299 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 ZIC4Q8N9L1 334 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 GATD1Q8NB37 220 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 BPIFB6Q8NFQ5 453 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 APOBEC3DQ96AK3 386 aaPredicted RBP1.22□□□□□ -2.21
GCFC2-209ENST00000486016 PYURFQ96I23 114 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 TRIB3Q96RU7 358 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 MCTS1Q9ULC4 181 aaKnown RBP1.22□□□□□ -2.21
GCFC2-209ENST00000486016 SNX24Q9Y343 169 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 U3KQK5 164 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 ATRNO75882 1429 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 SPATA31E1Q6ZUB1 1445 aa1.22□□□□□ -2.21
GCFC2-209ENST00000486016 IGLV10-54A0A075B6I4 117 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 IGHV1-45A0A0A0MS14 117 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 A6NED7 52 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 RNASEK-C17orf49H0YIS7 233 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 POP7O75817 140 aaKnown RBP1.21□□□□□ -2.22
GCFC2-209ENST00000486016 LDOC1O95751 146 aaPredicted RBP1.21□□□□□ -2.22
GCFC2-209ENST00000486016 PDYNP01213 254 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 SPNP16150 400 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 CTLA4P16410 223 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 CRABP2P29373 138 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 KCNJ3P48549 501 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 TNFRSF9Q07011 255 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 TPBGQ13641 420 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 CASP8Q14790 479 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 BCL2A1Q16548 175 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 LAMTOR1Q6IAA8 161 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 SMARCD3Q6STE5 483 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 DGAT2L6Q6ZPD8 337 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 CLEC20AQ6ZU45 233 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 FAM183BPQ6ZVS7 135 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 COPS6Q7L5N1 327 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 LYPD6Q86Y78 171 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 SLC25A45Q8N413 288 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 ACBD4Q8NC06 268 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 ZNF738Q8NE65 137 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 CASTOR1Q8WTX7 329 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 IFT81Q8WYA0 676 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 CCDC124Q96CT7 223 aaKnown RBP1.21□□□□□ -2.22
GCFC2-209ENST00000486016 SLC25A44Q96H78 314 aaPredicted RBP1.21□□□□□ -2.22
GCFC2-209ENST00000486016 TAPBPLQ9BX59 468 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 TSSK6Q9BXA6 273 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 OR2D2Q9H210 308 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 TAS2R13Q9NYV9 303 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 OR5V1Q9UGF6 321 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 ENPP5Q9UJA9 477 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 POMPQ9Y244 141 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 BTRCQ9Y297 605 aa1.21□□□□□ -2.22
GCFC2-209ENST00000486016 IGKV1D-37A0A075B6S9 117 aa1.2□□□□□ -2.22
GCFC2-209ENST00000486016 TRAV8-2A0A0B4J237 113 aa1.2□□□□□ -2.22
GCFC2-209ENST00000486016 GOLGA8QA0A0J9YX86 632 aa1.2□□□□□ -2.22
GCFC2-209ENST00000486016 A0A1B0GU33 70 aa1.2□□□□□ -2.22
GCFC2-209ENST00000486016 A0A1W2PRG6 482 aa1.2□□□□□ -2.22
GCFC2-209ENST00000486016 GOLGA8IPA6NC78 632 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms