RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 OR5B21A6NL26 309 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 G3V318 75 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 H0Y980 276 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 ZNF593O00488 134 aaPredicted RBP4.01□□□□□ -1.77
PTPN4-210ENST00000485247 FFAR1O14842 300 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 BIRC5O15392 142 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 RGS11O94810 467 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 IGHV3-7P01780 117 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 BTF3P20290 206 aaKnown RBP4.01□□□□□ -1.77
PTPN4-210ENST00000485247 GABRR1P24046 479 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 CD34P28906 385 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 RAB9AP51151 201 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 CD81P60033 236 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 STX1BP61266 288 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 GRB2P62993 217 aaKnown RBP4.01□□□□□ -1.77
PTPN4-210ENST00000485247 KPNB1Q14974 876 aaKnown RBP4.01□□□□□ -1.77
PTPN4-210ENST00000485247 GRK1Q15835 563 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 RNASE12Q5GAN4 147 aaKnown RBP4.01□□□□□ -1.77
PTPN4-210ENST00000485247 FGD3Q5JSP0 725 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 HEPN1Q6WQI6 88 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 IFT20Q8IY31 132 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 OFCC1Q8IZS5 231 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 DEFB125Q8N687 156 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 PROKR2Q8NFJ6 384 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 OR52N4Q8NGI2 321 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 OR5A2Q8NGI9 324 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 FAM81AQ8TBF8 368 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 ZNRF4Q8WWF5 429 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 TMEM106AQ96A25 262 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 RSRC1Q96IZ7 334 aaKnown RBP4.01□□□□□ -1.77
PTPN4-210ENST00000485247 TPD52L3Q96J77 140 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 RASL11BQ9BPW5 248 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 OVOL2Q9BRP0 275 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 TMEM120AQ9BXJ8 343 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 WDR12Q9GZL7 423 aaKnown RBP4.01□□□□□ -1.77
PTPN4-210ENST00000485247 WFDC10AQ9H1F0 79 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 GAL3ST2Q9H3Q3 398 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 RGCCQ9H4X1 137 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 CCDC134Q9H6E4 229 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 KAT8Q9H7Z6 458 aaKnown RBP4.01□□□□□ -1.77
PTPN4-210ENST00000485247 HES4Q9HCC6 221 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 PCDHB16Q9NRJ7 776 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 UBE2J1Q9Y385 318 aaPredicted RBP4.01□□□□□ -1.77
PTPN4-210ENST00000485247 FBXO7Q9Y3I1 522 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 COMMD3-BMI1R4GMX3 469 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 LOC102723971A0A1B0GUV8 181 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 DHRS12A0PJE2 317 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 IZUMO1RA6ND01 250 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 J3QT63 122 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 RTL8CO15255 209 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 MPZL2O60487 215 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 NOS1APO75052 506 aaPredicted RBP4□□□□□ -1.77
PTPN4-210ENST00000485247 TPPPO94811 219 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 INMTO95050 263 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 APOC1P02654 83 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 LGALS1P09382 135 aaKnown RBP4□□□□□ -1.77
PTPN4-210ENST00000485247 OR5H8P0DN80 308 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 NFYBP25208 207 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 SOX6P35712 828 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 LRRC23Q53EV4 343 aaPredicted RBP4□□□□□ -1.77
PTPN4-210ENST00000485247 CYBRD1Q53TN4 286 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 PLCXD3Q63HM9 321 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 LYG2Q86SG7 212 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 MOB3BQ86TA1 216 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 IZUMO1Q8IYV9 350 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 C17orf53Q8N3J3 647 aaPredicted RBP4□□□□□ -1.77
PTPN4-210ENST00000485247 OR4D6Q8NGJ1 314 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 OR9G1Q8NH87 305 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 CASTOR1Q8WTX7 329 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 LEAP2Q969E1 77 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 RPL36ALQ969Q0 106 aaKnown RBP4□□□□□ -1.77
PTPN4-210ENST00000485247 FLYWCH2Q96CP2 140 aaKnown RBP4□□□□□ -1.77
PTPN4-210ENST00000485247 DAZAP1Q96EP5 407 aaKnown RBP4□□□□□ -1.77
PTPN4-210ENST00000485247 S1PR3Q99500 378 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 CGREF1Q99674 301 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 PAIP2Q9BPZ3 127 aaKnown RBP4□□□□□ -1.77
PTPN4-210ENST00000485247 NEURL2Q9BR09 285 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 SRD5A3Q9H8P0 318 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 SCRT2Q9NQ03 307 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 PLSCR3Q9NRY6 295 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 GPR173Q9NS66 373 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 OR6C3Q9NZP0 311 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 GLS2Q9UI32 602 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 SLC7A11Q9UPY5 501 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 TMEM5Q9Y2B1 443 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 MRPS28Q9Y2Q9 187 aaKnown RBP4□□□□□ -1.77
PTPN4-210ENST00000485247 POLDIP2Q9Y2S7 368 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 PKHD1P08F94 4074 aa4□□□□□ -1.77
PTPN4-210ENST00000485247 DMBT1Q9UGM3 2413 aaPredicted RBP4□□□□□ -1.77
PTPN4-210ENST00000485247 A0A087X0M5 115 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 TRGV10A0A0A0MS01 117 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 A0A1B0GX30 115 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 OR11H12B2RN74 326 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 F8VVB4 439 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 F8VWA3 439 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 ARPC3O15145 178 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 CDK2AP2O75956 126 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 IFNA14P01570 189 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 IGHV3-11P01762 117 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 HSPB1P04792 205 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms