RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 ELMOD3Q96FG2 381 aa14.13□□□□□ -0.15
CTSA-207ENST00000484855 DHRS9Q9BPW9 319 aa14.13□□□□□ -0.15
CTSA-207ENST00000484855 MRPL37Q9BZE1 423 aaKnown RBP14.13□□□□□ -0.15
CTSA-207ENST00000484855 CLEC4MQ9H2X3 399 aaPredicted RBP14.13□□□□□ -0.15
CTSA-207ENST00000484855 C1orf123Q9NWV4 160 aa14.13□□□□□ -0.15
CTSA-207ENST00000484855 SPTA1P02549 2419 aa14.12□□□□□ -0.15
CTSA-207ENST00000484855 TRBV6-6A0A0A6YYG2 114 aa14.12□□□□□ -0.15
CTSA-207ENST00000484855 ZNF728P0DKX0 622 aa14.12□□□□□ -0.15
CTSA-207ENST00000484855 SLC9A3R2Q15599 337 aa14.12□□□□□ -0.15
CTSA-207ENST00000484855 CLEC18BQ6UXF7 455 aa14.12□□□□□ -0.15
CTSA-207ENST00000484855 KCTD9Q7L273 389 aa14.12□□□□□ -0.15
CTSA-207ENST00000484855 TMEM165Q9HC07 324 aa14.12□□□□□ -0.15
CTSA-207ENST00000484855 TAAR3PQ9P1P4 343 aa14.12□□□□□ -0.15
CTSA-207ENST00000484855 GLS2Q9UI32 602 aa14.12□□□□□ -0.15
CTSA-207ENST00000484855 ATP23Q9Y6H3 246 aa14.12□□□□□ -0.15
CTSA-207ENST00000484855 TRDCB7Z8K6 153 aa14.12□□□□□ -0.15
CTSA-207ENST00000484855 CCSO14618 274 aa14.12□□□□□ -0.15
CTSA-207ENST00000484855 ABCD4O14678 606 aa14.12□□□□□ -0.15
CTSA-207ENST00000484855 HERV-K104P61576 105 aa14.12□□□□□ -0.15
CTSA-207ENST00000484855 SUPT4H1P63272 117 aaKnown RBP14.12□□□□□ -0.15
CTSA-207ENST00000484855 ACP7Q6ZNF0 438 aa14.12□□□□□ -0.15
CTSA-207ENST00000484855 TREM2Q9NZC2 230 aa14.12□□□□□ -0.15
CTSA-207ENST00000484855 DPRXA6NFQ7 191 aa14.11□□□□□ -0.15
CTSA-207ENST00000484855 RGS11O94810 467 aa14.11□□□□□ -0.15
CTSA-207ENST00000484855 SCTP09683 121 aa14.11□□□□□ -0.15
CTSA-207ENST00000484855 SFTPCP11686 197 aa14.11□□□□□ -0.15
CTSA-207ENST00000484855 NFYAP23511 347 aaPredicted RBP14.11□□□□□ -0.15
CTSA-207ENST00000484855 CEBPDP49716 269 aaPredicted RBP14.11□□□□□ -0.15
CTSA-207ENST00000484855 ASCL1P50553 236 aa14.11□□□□□ -0.15
CTSA-207ENST00000484855 BSPH1Q075Z2 132 aa14.11□□□□□ -0.15
CTSA-207ENST00000484855 SHEQ5VZ18 495 aa14.11□□□□□ -0.15
CTSA-207ENST00000484855 C20orf204Q6ZNR8 217 aa14.11□□□□□ -0.15
CTSA-207ENST00000484855 ASCC1Q8N9N2 400 aaKnown RBP14.11□□□□□ -0.15
CTSA-207ENST00000484855 OR5T2Q8NGG2 359 aa14.11□□□□□ -0.15
CTSA-207ENST00000484855 LRRC29Q8WV35 223 aa14.11□□□□□ -0.15
CTSA-207ENST00000484855 MOB3AQ96BX8 217 aa14.11□□□□□ -0.15
CTSA-207ENST00000484855 PDCD10Q9BUL8 212 aa14.11□□□□□ -0.15
CTSA-207ENST00000484855 PLCE1Q9P212 2302 aa14.11□□□□□ -0.15
CTSA-207ENST00000484855 H7C1Q1 480 aa14.1□□□□□ -0.15
CTSA-207ENST00000484855 CCL21O00585 134 aa14.1□□□□□ -0.15
CTSA-207ENST00000484855 RGS13O14921 159 aa14.1□□□□□ -0.15
CTSA-207ENST00000484855 BET1O15155 118 aa14.1□□□□□ -0.15
CTSA-207ENST00000484855 SPRY3O43610 288 aa14.1□□□□□ -0.15
CTSA-207ENST00000484855 RPS2P15880 293 aaKnown RBP14.1□□□□□ -0.15
CTSA-207ENST00000484855 HLA-GP17693 338 aa14.1□□□□□ -0.15
CTSA-207ENST00000484855 AADACP22760 399 aa14.1□□□□□ -0.15
CTSA-207ENST00000484855 HOXA4Q00056 320 aaPredicted RBP14.1□□□□□ -0.15
CTSA-207ENST00000484855 SMIM21Q3B7S5 101 aa14.1□□□□□ -0.15
CTSA-207ENST00000484855 ZNF880Q6PDB4 577 aa14.1□□□□□ -0.15
CTSA-207ENST00000484855 C5orf24Q7Z6I8 188 aa14.1□□□□□ -0.15
CTSA-207ENST00000484855 COQ8AQ8NI60 647 aa14.1□□□□□ -0.15
CTSA-207ENST00000484855 PLPPR1Q8TBJ4 325 aa14.1□□□□□ -0.15
CTSA-207ENST00000484855 MRPL24Q96A35 216 aaKnown RBP14.1□□□□□ -0.15
CTSA-207ENST00000484855 OR2V2Q96R30 315 aa14.1□□□□□ -0.15
CTSA-207ENST00000484855 SLA2Q9H6Q3 261 aa14.1□□□□□ -0.15
CTSA-207ENST00000484855 POLEQ07864 2286 aa14.1□□□□□ -0.15
CTSA-207ENST00000484855 DBX1A6NMT0 343 aa14.1□□□□□ -0.15
CTSA-207ENST00000484855 PTBP3O95758 552 aaKnown RBP14.1□□□□□ -0.15
CTSA-207ENST00000484855 PPYP01298 95 aa14.1□□□□□ -0.15
CTSA-207ENST00000484855 TK1P04183 234 aa14.1□□□□□ -0.15
CTSA-207ENST00000484855 SEC61A1P61619 476 aaKnown RBP14.1□□□□□ -0.15
CTSA-207ENST00000484855 HLA-DRB3P79483 266 aa14.1□□□□□ -0.15
CTSA-207ENST00000484855 LY6DQ14210 128 aa14.1□□□□□ -0.15
CTSA-207ENST00000484855 ATXN7L3Q14CW9 347 aaPredicted RBP14.1□□□□□ -0.15
CTSA-207ENST00000484855 ABCA11PQ4W5N1 156 aa14.1□□□□□ -0.15
CTSA-207ENST00000484855 MEGF10Q96KG7 1140 aa14.1□□□□□ -0.15
CTSA-207ENST00000484855 CACNA1AO00555 2505 aa14.09□□□□□ -0.15
CTSA-207ENST00000484855 A0A0B4J2A0 478 aa14.09□□□□□ -0.15
CTSA-207ENST00000484855 FAM25EA8MYX2 175 aa14.09□□□□□ -0.15
CTSA-207ENST00000484855 CTXN2P0C2S0 81 aa14.09□□□□□ -0.15
CTSA-207ENST00000484855 HERPUD1Q15011 391 aa14.09□□□□□ -0.15
CTSA-207ENST00000484855 ZNF497Q6ZNH5 498 aa14.09□□□□□ -0.15
CTSA-207ENST00000484855 MOB1BQ7L9L4 216 aa14.09□□□□□ -0.15
CTSA-207ENST00000484855 SGPP2Q8IWX5 399 aa14.09□□□□□ -0.15
CTSA-207ENST00000484855 WFIKKN1Q96NZ8 548 aa14.09□□□□□ -0.15
CTSA-207ENST00000484855 GON7Q9BXV9 100 aa14.09□□□□□ -0.15
CTSA-207ENST00000484855 SHPKQ9UHJ6 478 aa14.09□□□□□ -0.15
CTSA-207ENST00000484855 ATXN7O15265 892 aaPredicted RBP14.09□□□□□ -0.15
CTSA-207ENST00000484855 DIRAS3O95661 229 aa14.09□□□□□ -0.15
CTSA-207ENST00000484855 IFNA2P01563 188 aa14.09□□□□□ -0.15
CTSA-207ENST00000484855 RCC1P18754 421 aaPredicted RBP14.09□□□□□ -0.15
CTSA-207ENST00000484855 ZNF81P51508 661 aa14.09□□□□□ -0.15
CTSA-207ENST00000484855 UCP3P55916 312 aa14.09□□□□□ -0.15
CTSA-207ENST00000484855 PIGPP57054 158 aa14.09□□□□□ -0.15
CTSA-207ENST00000484855 ANKRD55Q3KP44 614 aa14.09□□□□□ -0.15
CTSA-207ENST00000484855 LGALSLQ3ZCW2 172 aaPredicted RBP14.09□□□□□ -0.15
CTSA-207ENST00000484855 SLC38A6Q8IZM9 456 aa14.09□□□□□ -0.15
CTSA-207ENST00000484855 OR10Z1Q8NGY1 313 aa14.09□□□□□ -0.15
CTSA-207ENST00000484855 NGBQ9NPG2 151 aa14.09□□□□□ -0.15
CTSA-207ENST00000484855 PRR13Q9NZ81 148 aa14.09□□□□□ -0.15
CTSA-207ENST00000484855 ATRXP46100 2492 aa14.08□□□□□ -0.16
CTSA-207ENST00000484855 TEX13DA0A0J9YY54 714 aaPredicted RBP14.08□□□□□ -0.16
CTSA-207ENST00000484855 CRYM-AS1A6NIL9 109 aa14.08□□□□□ -0.16
CTSA-207ENST00000484855 SRSF4Q08170 494 aaKnown RBP14.08□□□□□ -0.16
CTSA-207ENST00000484855 OR4A4PQ8NGN8 299 aa14.08□□□□□ -0.16
CTSA-207ENST00000484855 RASL12Q9NYN1 266 aa14.08□□□□□ -0.16
CTSA-207ENST00000484855 IGKV1-6A0A0C4DH72 117 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 FAM90A27PA6NNH2 459 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 POM121CA8CG34 1229 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 PSPNO60542 156 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms