RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, human

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR3-210	ENST00000484596	C15orf40	Q8WUR7	153 aa		4.16	□□□□□ -1.74
UBR3-210	ENST00000484596	RXFP2	Q8WXD0	754 aa		4.16	□□□□□ -1.74
UBR3-210	ENST00000484596	TOLLIP	Q9H0E2	274 aa		4.16	□□□□□ -1.74
UBR3-210	ENST00000484596	OR51B5	Q9H339	312 aa		4.16	□□□□□ -1.74
UBR3-210	ENST00000484596	OR51B6	Q9H340	312 aa		4.16	□□□□□ -1.74
UBR3-210	ENST00000484596	SIRT7	Q9NRC8	400 aa		4.16	□□□□□ -1.74
UBR3-210	ENST00000484596	ZNF223	Q9UK11	482 aa	Predicted RBP	4.16	□□□□□ -1.74
UBR3-210	ENST00000484596	KMT2B	Q9UMN6	2715 aa	Predicted RBP	4.15	□□□□□ -1.74
UBR3-210	ENST00000484596	DOCK8	Q8NF50	2099 aa		4.15	□□□□□ -1.74
UBR3-210	ENST00000484596	IGLV4-69	A0A075B6H9	119 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596		A0A0A6YYH2	397 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596		A0A1W2PP18	115 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596		A6NJ64	397 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	LINC01619	G3V211	115 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	SLC22A5	O76082	557 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	IGKV3-11	P04433	115 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	GP1BA	P07359	652 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	CTXN2	P0C2S0	81 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	HLA-DMA	P28067	261 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	PSMB5	P28074	263 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	PPOX	P50336	477 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	EIF4EBP2	Q13542	120 aa	Predicted RBP	4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	MAD2L1BP	Q15013	274 aa	Predicted RBP	4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	SNRNP35	Q16560	246 aa	Known RBP	4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	THOC7	Q6I9Y2	204 aa	Known RBP	4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	TMEM205	Q6UW68	189 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	FUNDC1	Q8IVP5	155 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	CDRT4	Q8N9R6	151 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	ZNF680	Q8NEM1	530 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	RERG	Q96A58	199 aa	Predicted RBP	4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	OTUB2	Q96DC9	234 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	SERPINB11	Q96P15	392 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	SULT4A1	Q9BR01	284 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	TMEM243	Q9BU79	118 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	BEX2	Q9BXY8	128 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	SAMD10	Q9BYL1	202 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	ARV1	Q9H2C2	271 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	WDR54	Q9H977	334 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	C6orf50	Q9HD87	102 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	HMG20A	Q9NP66	347 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	LHX9	Q9NQ69	397 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	VAPA	Q9P0L0	249 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	C3orf18	Q9UK00	162 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	SIGLEC9	Q9Y336	463 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596		Q9Y3F1	56 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	SAMHD1	Q9Y3Z3	626 aa	Known RBP	4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	DOCK6	Q96HP0	2047 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	LOC400499	M0QZD8	3231 aa		4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	SMG1	Q96Q15	3661 aa	Known RBP	4.15	□□□□□ -1.75
UBR3-210	ENST00000484596	IGHV2OR16-5	A0A0B4J2B6	119 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	CENPBD1	B2RD01	187 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596		H3BQV1	296 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	LIN7A	O14910	233 aa	Predicted RBP	4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	RPP14	O95059	124 aa	Known RBP	4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	FADS2	O95864	444 aa	Known RBP	4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	IFNA6	P05013	189 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	SLC35G6	P0C7Q6	338 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	IL9	P15248	144 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	ZNF7	P17097	686 aa	Predicted RBP	4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	PGAM1	P18669	254 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	G0S2	P27469	103 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	LOX	P28300	417 aa	Predicted RBP	4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	GTF2H1	P32780	548 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	GNG10	P50151	68 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	GFER	P55789	205 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	DYNC1I2	Q13409	638 aa	Known RBP	4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	ALX1	Q15699	326 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	GOLGA7B	Q2TAP0	167 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	FAM27D1	Q5T7N8	215 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	FAHD1	Q6P587	224 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	DEFB128	Q7Z7B8	93 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	CALHM1	Q8IU99	346 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	OR5D18	Q8NGL1	313 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	OR5W2	Q8NH69	310 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	COQ8A	Q8NI60	647 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	RXFP4	Q8TDU9	374 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	ESR2	Q92731	530 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	PDXP	Q96GD0	296 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	FAM19A4	Q96LR4	140 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	OR51V1	Q9H2C8	321 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	ZNF442	Q9H7R0	627 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	METTL8	Q9H825	291 aa	Known RBP	4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	C12orf10	Q9HB07	376 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	DDX19A	Q9NUU7	478 aa	Known RBP	4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	TBL2	Q9Y4P3	447 aa	Known RBP	4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	LRP4	O75096	1905 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	PATJ	Q8NI35	1801 aa		4.14	□□□□□ -1.75
UBR3-210	ENST00000484596	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	GVINP1	Q7Z2Y8	2422 aa		4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	AQP9	O43315	295 aa		4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	REM1	O75628	298 aa		4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	OCM	P0CE72	109 aa	Predicted RBP	4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	HSPD1	P10809	573 aa	Known RBP	4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	ZNF823	P16415	610 aa		4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	ZNF32	P17041	273 aa		4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	KDELR2	P33947	212 aa		4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	DNASE1L1	P49184	302 aa		4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	SERPINB9	P50453	376 aa		4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	RAB14	P61106	215 aa		4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	RPL10A	P62906	217 aa	Known RBP	4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms