RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 CXorf1O96002 111 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 MUC1P15941 1255 aaPredicted RBP2.77□□□□□ -1.97
VPS13A-211ENST00000484581 SLC6A1P30531 599 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 GRPRP30550 384 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 RCVRNP35243 200 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 PFN3P60673 137 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 ZNF235Q14590 738 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 C4orf26Q17RF5 130 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 HLA-DRB5Q30154 266 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 SP6Q3SY56 376 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 NXNL2Q5VZ03 156 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 TMEM215Q68D42 235 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 CASP12Q6UXS9 341 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 OLIG3Q7RTU3 272 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 ZNF565Q8N9K5 539 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 SMIM19Q96E16 107 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 PPP1R36Q96LQ0 422 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 MBOAT7Q96N66 472 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 GPR82Q96P67 336 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 EBPLQ9BY08 206 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 ZNF436Q9C0F3 470 aaPredicted RBP2.77□□□□□ -1.97
VPS13A-211ENST00000484581 METTL9Q9H1A3 318 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 OPN4Q9UHM6 478 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 KLK12Q9UKR0 248 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 C14orf166Q9Y224 244 aaKnown RBP2.77□□□□□ -1.97
VPS13A-211ENST00000484581 ZNF706Q9Y5V0 76 aaPredicted RBP2.77□□□□□ -1.97
VPS13A-211ENST00000484581 TUBGCP6Q96RT7 1819 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 KIAA1671Q9BY89 1806 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 NOS1P29475 1434 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 TINCRA0A1B0GVN0 87 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 DAPL1A0PJW8 107 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 GMNCA6NCL1 334 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 ZNF850A8MQ14 1090 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 F5H768 121 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 TMEM250H0YL14 139 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 SLC16A4O15374 487 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 LHBP01229 141 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 COX5BP10606 129 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 CD28P10747 220 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 NTF3P20783 257 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 NPY1RP25929 384 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 ACTR1BP42025 376 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 GTF2BQ00403 316 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 PAFAH1B3Q15102 231 aaKnown RBP2.76□□□□□ -1.97
VPS13A-211ENST00000484581 TMEM241Q24JQ0 296 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 LINC00483Q53H64 154 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 TTMPQ5BVD1 217 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 PDZD11Q5EBL8 140 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 PRSS54Q6PEW0 395 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 TTC33Q6PID6 262 aaPredicted RBP2.76□□□□□ -1.97
VPS13A-211ENST00000484581 UNQ9165/PRO28630Q6UXU0 137 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 SPNS3Q6ZMD2 512 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 TIFABQ6ZNK6 161 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 CLEC20AQ6ZU45 233 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 ZNF695Q8IW36 515 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 STK40Q8N2I9 435 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 MIR7-3HGQ8N6C7 128 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 OR2M3Q8NG83 312 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 RNF133Q8WVZ7 376 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 FXYD5Q96DB9 178 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 PACRGQ96M98 296 aaPredicted RBP2.76□□□□□ -1.97
VPS13A-211ENST00000484581 OLFM3Q96PB7 478 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 THTPAQ9BU02 230 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 SLC22A4Q9H015 551 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 UCK1Q9HA47 277 aa2.76□□□□□ -1.97
VPS13A-211ENST00000484581 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.76□□□□□ -1.97
VPS13A-211ENST00000484581 TBL2Q9Y4P3 447 aaKnown RBP2.76□□□□□ -1.97
VPS13A-211ENST00000484581 YLPM1P49750 1951 aaKnown RBP2.76□□□□□ -1.97
VPS13A-211ENST00000484581 PRRC2AP48634 2157 aaKnown RBP2.76□□□□□ -1.97
VPS13A-211ENST00000484581 TRIP11Q15643 1979 aa2.75□□□□□ -1.97
VPS13A-211ENST00000484581 BTNL10A8MVZ5 291 aa2.75□□□□□ -1.97
VPS13A-211ENST00000484581 BIRC5O15392 142 aa2.75□□□□□ -1.97
VPS13A-211ENST00000484581 ZW10O43264 779 aa2.75□□□□□ -1.97
VPS13A-211ENST00000484581 SSNA1O43805 119 aa2.75□□□□□ -1.97
VPS13A-211ENST00000484581 ASS1P00966 412 aaKnown RBP2.75□□□□□ -1.97
VPS13A-211ENST00000484581 IGHV1-46P01743 117 aa2.75□□□□□ -1.97
VPS13A-211ENST00000484581 C8orf88P0DMB2 117 aa2.75□□□□□ -1.97
VPS13A-211ENST00000484581 UGT2B7P16662 529 aa2.75□□□□□ -1.97
VPS13A-211ENST00000484581 CELP19835 753 aa2.75□□□□□ -1.97
VPS13A-211ENST00000484581 NUDT2P50583 147 aa2.75□□□□□ -1.97
VPS13A-211ENST00000484581 ITGB3BPQ13352 177 aaPredicted RBP2.75□□□□□ -1.97
VPS13A-211ENST00000484581 FAM53BQ14153 422 aa2.75□□□□□ -1.97
VPS13A-211ENST00000484581 RGS21Q2M5E4 152 aa2.75□□□□□ -1.97
VPS13A-211ENST00000484581 COX19Q49B96 90 aa2.75□□□□□ -1.97
VPS13A-211ENST00000484581 ABCA11PQ4W5N1 156 aa2.75□□□□□ -1.97
VPS13A-211ENST00000484581 COQ5Q5HYK3 327 aa2.75□□□□□ -1.97
VPS13A-211ENST00000484581 XKRXQ6PP77 449 aa2.75□□□□□ -1.97
VPS13A-211ENST00000484581 KRTAP11-1Q8IUC1 163 aa2.75□□□□□ -1.97
VPS13A-211ENST00000484581 Q8N402 240 aa2.75□□□□□ -1.97
VPS13A-211ENST00000484581 RIBC1Q8N443 379 aaPredicted RBP2.75□□□□□ -1.97
VPS13A-211ENST00000484581 OR8J2Q8NGG1 315 aa2.75□□□□□ -1.97
VPS13A-211ENST00000484581 RTN4IP1Q8WWV3 396 aaPredicted RBP2.75□□□□□ -1.97
VPS13A-211ENST00000484581 CLDN23Q96B33 292 aa2.75□□□□□ -1.97
VPS13A-211ENST00000484581 IP6K3Q96PC2 410 aa2.75□□□□□ -1.97
VPS13A-211ENST00000484581 CHST5Q9GZS9 411 aa2.75□□□□□ -1.97
VPS13A-211ENST00000484581 HMGXB4Q9UGU5 601 aa2.75□□□□□ -1.97
VPS13A-211ENST00000484581 RWDD2AQ9UIY3 292 aa2.75□□□□□ -1.97
VPS13A-211ENST00000484581 POMPQ9Y244 141 aa2.75□□□□□ -1.97
VPS13A-211ENST00000484581 COL16A1Q07092 1604 aaPredicted RBP2.75□□□□□ -1.97
VPS13A-211ENST00000484581 COL27A1Q8IZC6 1860 aaPredicted RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms