RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 CYP2G1PQ6ZSU1 146 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 PARS2Q7L3T8 475 aaKnown RBP6.8□□□□□ -1.32
COL4A5-205ENST00000483338 LHFPL1Q86WI0 220 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 KLHDC1Q8N7A1 406 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 TMEM171Q8WVE6 324 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 SCAMP4Q969E2 229 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 FAM46BQ96A09 425 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 TSSK2Q96PF2 358 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 RBM24Q9BX46 236 aaKnown RBP6.8□□□□□ -1.32
COL4A5-205ENST00000483338 VN1R1Q9GZP7 353 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 TRAV8-6A0A0B4J262 113 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 F2Z2F3 143 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 TNFSF12O43508 249 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 ATP1B2P14415 290 aaPredicted RBP6.8□□□□□ -1.32
COL4A5-205ENST00000483338 KITLGP21583 273 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 MSR1P21757 451 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 AADACP22760 399 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 NKX2-1P43699 371 aaPredicted RBP6.8□□□□□ -1.32
COL4A5-205ENST00000483338 MTCP1P56278 107 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 UNC119Q13432 240 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 WDR82Q6UXN9 313 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 COMMD2Q86X83 199 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 OR8I2Q8N0Y5 310 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 OR4P4Q8NGL7 312 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 RASD2Q96D21 266 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 GUCD1Q96NT3 240 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 OR2V2Q96R30 315 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 FAM103A1Q9BTL3 118 aaKnown RBP6.8□□□□□ -1.32
COL4A5-205ENST00000483338 GPR27Q9NS67 375 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 SDCBPO00560 298 aaPredicted RBP6.8□□□□□ -1.32
COL4A5-205ENST00000483338 CLDN17P56750 224 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 SRSF7Q16629 238 aaKnown RBP eCLIP6.8□□□□□ -1.32
COL4A5-205ENST00000483338 C1orf53Q5VUE5 145 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 TCF23Q7RTU1 214 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 TCTEX1D1Q8N7M0 179 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 OR5B3Q8NH48 314 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 LRFN3Q9BTN0 628 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 SAMD10Q9BYL1 202 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 RARRES3Q9UL19 164 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 SLC22A13Q9Y226 551 aa6.8□□□□□ -1.32
COL4A5-205ENST00000483338 MAP1BP46821 2468 aaKnown RBP6.79□□□□□ -1.32
COL4A5-205ENST00000483338 ALG1L2C9J202 215 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 TNFRSF10CO14798 259 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 NPIPB7O75200 414 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 BRI3O95415 125 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 SRP14P37108 136 aaKnown RBP6.79□□□□□ -1.32
COL4A5-205ENST00000483338 SLC6A8P48029 635 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 LCN2P80188 198 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 ZNF266Q14584 549 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 MPV17L2Q567V2 206 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 ATOH7Q8N100 152 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 SUSD3Q96L08 255 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 ZNF681Q96N22 645 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 SCGB3A2Q96PL1 93 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 REPIN1Q9BWE0 567 aaKnown RBP6.79□□□□□ -1.32
COL4A5-205ENST00000483338 CLEC1BQ9P126 229 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 RHBDD3Q9Y3P4 386 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 ATG2AQ2TAZ0 1938 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 TRAV1-1A0A0B4J248 108 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 A0A0U1RQK1 487 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 SPAARA0A1B0GVQ0 90 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 GRXCR1A8MXD5 290 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 TRAPPC2LH3BP13 241 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 TRAF3IP2O43734 574 aaPredicted RBP6.79□□□□□ -1.32
COL4A5-205ENST00000483338 IGLV3-27P01718 113 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 WNT2P09544 360 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 IGFBP3P17936 291 aaPredicted RBP6.79□□□□□ -1.32
COL4A5-205ENST00000483338 LHX2P50458 406 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 MLF1P58340 268 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 ELAVL3Q14576 367 aaKnown RBP6.79□□□□□ -1.32
COL4A5-205ENST00000483338 GNMTQ14749 295 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 CLLU1OSQ5K130 101 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 TMEM64Q6YI46 380 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 OR2M3Q8NG83 312 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 HDAC8Q9BY41 377 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 TP73-AS1Q9UF72 201 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 B3GALT5Q9Y2C3 310 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 SELENOKQ9Y6D0 94 aa6.79□□□□□ -1.32
COL4A5-205ENST00000483338 PHF3Q92576 2039 aaKnown RBP6.79□□□□□ -1.32
COL4A5-205ENST00000483338 NPIPB15A6NHN6 443 aaPredicted RBP6.78□□□□□ -1.32
COL4A5-205ENST00000483338 ZNF732B4DXR9 585 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 CATP04040 527 aaKnown RBP6.78□□□□□ -1.32
COL4A5-205ENST00000483338 H2BFMP0C1H6 154 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 DRD1P21728 446 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 BAXQ07812 192 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 ZP4Q12836 540 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 CDCP2Q5VXM1 449 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 FCRL6Q6DN72 434 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 CDC20BQ86Y33 519 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 CMTM8Q8IZV2 173 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 DEFB125Q8N687 156 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 OR52M1Q8NGK5 317 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 SLC35A4Q96G79 324 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 AGMATQ9BSE5 352 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 TM2D1Q9BX74 207 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 FAM24AA6NFZ4 105 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 CEBPZOSA8MTT3 80 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 OMGP23515 440 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 TMEM240Q5SV17 173 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 FAM78BQ5VT40 261 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms