RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 KIF25Q9UIL4 384 aa11□□□□□ -0.65
VARS-226ENST00000483275 A0A1W2PPE3 182 aa10.99□□□□□ -0.65
VARS-226ENST00000483275 A0A1W2PPI3 338 aa10.99□□□□□ -0.65
VARS-226ENST00000483275 LINC01548A6NM66 108 aa10.99□□□□□ -0.65
VARS-226ENST00000483275 DUS4LO95620 317 aaKnown RBP10.99□□□□□ -0.65
VARS-226ENST00000483275 ALPLP05186 524 aa10.99□□□□□ -0.65
VARS-226ENST00000483275 MNDAP41218 407 aa10.99□□□□□ -0.65
VARS-226ENST00000483275 LUMP51884 338 aaPredicted RBP10.99□□□□□ -0.65
VARS-226ENST00000483275 GABPB1Q06547 395 aaPredicted RBP10.99□□□□□ -0.65
VARS-226ENST00000483275 CDK5R1Q15078 307 aa10.99□□□□□ -0.65
VARS-226ENST00000483275 UTS2BQ765I0 119 aa10.99□□□□□ -0.65
VARS-226ENST00000483275 CBR4Q8N4T8 237 aa10.99□□□□□ -0.65
VARS-226ENST00000483275 C5orf56Q8N8D9 126 aa10.99□□□□□ -0.65
VARS-226ENST00000483275 SPSB1Q96BD6 273 aa10.99□□□□□ -0.65
VARS-226ENST00000483275 WWC2-AS2Q96NR7 200 aa10.99□□□□□ -0.65
VARS-226ENST00000483275 NR1H4Q96RI1 486 aaPredicted RBP10.99□□□□□ -0.65
VARS-226ENST00000483275 PCDHGB5Q9Y5G0 923 aa10.99□□□□□ -0.65
VARS-226ENST00000483275 SERPINE3A8MV23 424 aa10.98□□□□□ -0.65
VARS-226ENST00000483275 FAM106CPP0CH98 169 aa10.98□□□□□ -0.65
VARS-226ENST00000483275 TMEM11P17152 192 aa10.98□□□□□ -0.65
VARS-226ENST00000483275 REG1BP48304 166 aa10.98□□□□□ -0.65
VARS-226ENST00000483275 PRRX1P54821 245 aa10.98□□□□□ -0.65
VARS-226ENST00000483275 ZSCAN26Q16670 478 aa10.98□□□□□ -0.65
VARS-226ENST00000483275 ZIK1Q3SY52 487 aaPredicted RBP10.98□□□□□ -0.65
VARS-226ENST00000483275 CCDC144NLQ6NUI1 221 aa10.98□□□□□ -0.65
VARS-226ENST00000483275 CCDC54Q8NEL0 328 aa10.98□□□□□ -0.65
VARS-226ENST00000483275 OR51D1Q8NGF3 324 aa10.98□□□□□ -0.65
VARS-226ENST00000483275 OR8J1Q8NGP2 316 aa10.98□□□□□ -0.65
VARS-226ENST00000483275 OR9G1Q8NH87 305 aa10.98□□□□□ -0.65
VARS-226ENST00000483275 RFESDQ8TAC1 157 aa10.98□□□□□ -0.65
VARS-226ENST00000483275 RFKQ969G6 155 aa10.98□□□□□ -0.65
VARS-226ENST00000483275 C10orf35Q96D05 121 aa10.98□□□□□ -0.65
VARS-226ENST00000483275 PRR25Q96S07 402 aa10.98□□□□□ -0.65
VARS-226ENST00000483275 MBOAT4Q96T53 435 aa10.98□□□□□ -0.65
VARS-226ENST00000483275 CALYQ9NYX4 217 aa10.98□□□□□ -0.65
VARS-226ENST00000483275 AASSQ9UDR5 926 aa10.98□□□□□ -0.65
VARS-226ENST00000483275 MEIKINA0A087WXM9 373 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 A0A087X0M5 115 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 IGHV3-72A0A0B4J1Y9 119 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 KBTBD11-OT1A0A1B0GTJ5 212 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 A0A1B0GX30 115 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 FUOMA2VDF0 154 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 ZNF729A6NN14 1252 aaPredicted RBP10.97□□□□□ -0.65
VARS-226ENST00000483275 H0YHG0 523 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 H0YJX3 145 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 DEGS1O15121 323 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 IGKV1D-33P01593 117 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 IGKV1-33P01594 117 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 CSN2P05814 226 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 HCKP08631 526 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 TMEM225BP0DP42 221 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 LMO1P25800 156 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 SSTR5P35346 364 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 PAN3Q58A45 887 aaKnown RBP10.97□□□□□ -0.65
VARS-226ENST00000483275 TMEM244Q5VVB8 128 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 FAM53AQ6NSI3 398 aaPredicted RBP10.97□□□□□ -0.65
VARS-226ENST00000483275 OR10K1Q8NGX5 313 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 UBALD1Q8TB05 177 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 PLPPR1Q8TBJ4 325 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 MRGPRDQ8TDS7 321 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 TRUB1Q8WWH5 349 aaKnown RBP10.97□□□□□ -0.65
VARS-226ENST00000483275 RAX2Q96IS3 184 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 HRASLS5Q96KN8 279 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 P2RX4Q99571 388 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 PSG11Q9UQ72 335 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 MYRFQ9Y2G1 1151 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 DNAH7Q8WXX0 4024 aa10.97□□□□□ -0.65
VARS-226ENST00000483275 DAPL1A0PJW8 107 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 FAM90A18PA6NE21 464 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 FAM90A16PA6NEW6 464 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 FAM90A20PA6NIJ5 464 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 SNTNA6NMZ2 147 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 OR4C45A6NMZ5 311 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 FAM90A9PA6NNJ1 464 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 FAM90A12PA8MX19 464 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 FAM90A5PA8MXJ8 464 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 J3QLW9 94 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 J3QR06 171 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 M0QZK8 103 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 SLC16A6O15403 523 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 ISG15P05161 165 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 HTR1AP08908 422 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 FAM90A15PP0C7V4 464 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 FAM90A13PP0C7W8 464 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 FAM90A14PP0C7W9 464 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 FAM90A24PP0C7X0 464 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 ZNF19P17023 458 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 ZP1P60852 638 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 TMED1Q13445 227 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 PIGYQ3MUY2 71 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 SLC35E3Q7Z769 313 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 CHPT1Q8WUD6 406 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 CREB3L1Q96BA8 519 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 RNFT2Q96EX2 444 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 PELI1Q96FA3 418 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 C4orf36Q96KX1 117 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 IDI2-AS1Q9NZ38 188 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 GMPPBQ9Y5P6 360 aa10.96□□□□□ -0.65
VARS-226ENST00000483275 DYNC2H1Q8NCM8 4307 aaKnown RBP10.95□□□□□ -0.66
VARS-226ENST00000483275 TRAV24A0A0B4J272 114 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms