RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 SIT1Q9Y3P8 196 aa10.79□□□□□ -0.68
CCDC78-213ENST00000482878 FAM221AA4D161 298 aa10.79□□□□□ -0.68
CCDC78-213ENST00000482878 PATE3B3GLJ2 98 aa10.79□□□□□ -0.68
CCDC78-213ENST00000482878 E5RGE8 158 aa10.79□□□□□ -0.68
CCDC78-213ENST00000482878 PDGFBP01127 241 aaPredicted RBP10.79□□□□□ -0.68
CCDC78-213ENST00000482878 SRP19P09132 144 aaKnown RBP10.79□□□□□ -0.68
CCDC78-213ENST00000482878 PAX1P15863 534 aa10.79□□□□□ -0.68
CCDC78-213ENST00000482878 SP6Q3SY56 376 aa10.79□□□□□ -0.68
CCDC78-213ENST00000482878 CHRFAM7AQ494W8 412 aa10.79□□□□□ -0.68
CCDC78-213ENST00000482878 OR4X1Q8NH49 305 aa10.79□□□□□ -0.68
CCDC78-213ENST00000482878 HIST1H2AAQ96QV6 131 aa10.79□□□□□ -0.68
CCDC78-213ENST00000482878 DIRC2Q96SL1 478 aa10.79□□□□□ -0.68
CCDC78-213ENST00000482878 LRFN1Q9P244 771 aa10.79□□□□□ -0.68
CCDC78-213ENST00000482878 LAMP3Q9UQV4 416 aa10.79□□□□□ -0.68
CCDC78-213ENST00000482878 NSG2Q9Y328 171 aa10.79□□□□□ -0.68
CCDC78-213ENST00000482878 PIAS2O75928 621 aa10.79□□□□□ -0.68
CCDC78-213ENST00000482878 LINC00614P0C842 121 aa10.79□□□□□ -0.68
CCDC78-213ENST00000482878 COL10A1Q03692 680 aa10.79□□□□□ -0.68
CCDC78-213ENST00000482878 SLC25A53Q5H9E4 307 aa10.79□□□□□ -0.68
CCDC78-213ENST00000482878 DCAF10Q5QP82 559 aa10.79□□□□□ -0.68
CCDC78-213ENST00000482878 WDR25Q64LD2 544 aaPredicted RBP10.79□□□□□ -0.68
CCDC78-213ENST00000482878 RNF138Q8WVD3 245 aa10.79□□□□□ -0.68
CCDC78-213ENST00000482878 TMEM18Q96B42 140 aa10.79□□□□□ -0.68
CCDC78-213ENST00000482878 REEP6Q96HR9 211 aa10.79□□□□□ -0.68
CCDC78-213ENST00000482878 MCTS1Q9ULC4 181 aaKnown RBP10.79□□□□□ -0.68
CCDC78-213ENST00000482878 FREM2Q5SZK8 3169 aa10.78□□□□□ -0.68
CCDC78-213ENST00000482878 SLC33A1O00400 549 aaPredicted RBP10.78□□□□□ -0.68
CCDC78-213ENST00000482878 CA11O75493 328 aa10.78□□□□□ -0.68
CCDC78-213ENST00000482878 NXPH1P58417 271 aa10.78□□□□□ -0.68
CCDC78-213ENST00000482878 FAM189A2Q15884 450 aa10.78□□□□□ -0.68
CCDC78-213ENST00000482878 C6orf201Q7Z4U5 140 aa10.78□□□□□ -0.68
CCDC78-213ENST00000482878 SULF2Q8IWU5 870 aa10.78□□□□□ -0.68
CCDC78-213ENST00000482878 PGAM5Q96HS1 289 aa10.78□□□□□ -0.68
CCDC78-213ENST00000482878 HDHD3Q9BSH5 251 aaPredicted RBP10.78□□□□□ -0.68
CCDC78-213ENST00000482878 AKIRIN1Q9H9L7 192 aaPredicted RBP10.78□□□□□ -0.68
CCDC78-213ENST00000482878 ELL3Q9HB65 397 aaPredicted RBP10.78□□□□□ -0.68
CCDC78-213ENST00000482878 FAM230AA0A1W2PPH8 454 aa10.78□□□□□ -0.68
CCDC78-213ENST00000482878 F5H5K5 113 aa10.78□□□□□ -0.68
CCDC78-213ENST00000482878 TIAF1O95411 115 aa10.78□□□□□ -0.68
CCDC78-213ENST00000482878 FAHP16930 419 aa10.78□□□□□ -0.68
CCDC78-213ENST00000482878 ZNF43P17038 809 aa10.78□□□□□ -0.68
CCDC78-213ENST00000482878 TSPAN7P41732 249 aa10.78□□□□□ -0.68
CCDC78-213ENST00000482878 HIST3H3Q16695 136 aa10.78□□□□□ -0.68
CCDC78-213ENST00000482878 SAPCD1Q5SSQ6 148 aa10.78□□□□□ -0.68
CCDC78-213ENST00000482878 SCRG1O75711 98 aa10.78□□□□□ -0.68
CCDC78-213ENST00000482878 TAF9Q16594 264 aa10.78□□□□□ -0.68
CCDC78-213ENST00000482878 CPEB2Q7Z5Q1 589 aaKnown RBP10.78□□□□□ -0.68
CCDC78-213ENST00000482878 OR10A7Q8NGE5 316 aa10.78□□□□□ -0.68
CCDC78-213ENST00000482878 TOMM40LQ969M1 308 aa10.78□□□□□ -0.68
CCDC78-213ENST00000482878 ZNF2Q9BSG1 426 aaPredicted RBP10.78□□□□□ -0.68
CCDC78-213ENST00000482878 SLC7A11Q9UPY5 501 aa10.78□□□□□ -0.68
CCDC78-213ENST00000482878 DMDP11532 3685 aa10.78□□□□□ -0.68
CCDC78-213ENST00000482878 CHD3Q12873 2000 aaKnown RBP10.77□□□□□ -0.68
CCDC78-213ENST00000482878 CCDC163A0A0D9SF12 145 aa10.77□□□□□ -0.68
CCDC78-213ENST00000482878 OR2J2O76002 312 aa10.77□□□□□ -0.68
CCDC78-213ENST00000482878 FCGR2AP12318 317 aa10.77□□□□□ -0.68
CCDC78-213ENST00000482878 MRPS11P82912 194 aaKnown RBP10.77□□□□□ -0.68
CCDC78-213ENST00000482878 P2RY6Q15077 328 aa10.77□□□□□ -0.68
CCDC78-213ENST00000482878 KCNMB1Q16558 191 aa10.77□□□□□ -0.68
CCDC78-213ENST00000482878 TMEM176BQ3YBM2 270 aaPredicted RBP10.77□□□□□ -0.68
CCDC78-213ENST00000482878 RHBDD2Q6NTF9 364 aa10.77□□□□□ -0.68
CCDC78-213ENST00000482878 ZNF774Q6NX45 483 aa10.77□□□□□ -0.68
CCDC78-213ENST00000482878 ADPRHL1Q8NDY3 354 aa10.77□□□□□ -0.68
CCDC78-213ENST00000482878 PIGTQ969N2 578 aa10.77□□□□□ -0.68
CCDC78-213ENST00000482878 OXGR1Q96P68 337 aa10.77□□□□□ -0.68
CCDC78-213ENST00000482878 GNG13Q9P2W3 67 aa10.77□□□□□ -0.68
CCDC78-213ENST00000482878 ZFP92A6NM28 416 aa10.77□□□□□ -0.69
CCDC78-213ENST00000482878 MSTNO14793 375 aa10.77□□□□□ -0.69
CCDC78-213ENST00000482878 GPR137BO60478 399 aa10.77□□□□□ -0.69
CCDC78-213ENST00000482878 TK1P04183 234 aa10.77□□□□□ -0.69
CCDC78-213ENST00000482878 TFPI2P48307 235 aa10.77□□□□□ -0.69
CCDC78-213ENST00000482878 NOVA1P51513 510 aaKnown RBP10.77□□□□□ -0.69
CCDC78-213ENST00000482878 GRB2P62993 217 aaKnown RBP10.77□□□□□ -0.69
CCDC78-213ENST00000482878 SLC25A45Q8N413 288 aa10.77□□□□□ -0.69
CCDC78-213ENST00000482878 GINS3Q9BRX5 216 aa10.77□□□□□ -0.69
CCDC78-213ENST00000482878 ZNF160Q9HCG1 818 aa10.77□□□□□ -0.69
CCDC78-213ENST00000482878 B3GALT1Q9Y5Z6 326 aa10.77□□□□□ -0.69
CCDC78-213ENST00000482878 SERPINE3A8MV23 424 aa10.77□□□□□ -0.69
CCDC78-213ENST00000482878 IFNL4K9M1U5 179 aa10.77□□□□□ -0.69
CCDC78-213ENST00000482878 IGLV3-1P01715 115 aa10.77□□□□□ -0.69
CCDC78-213ENST00000482878 FGF5P12034 268 aa10.77□□□□□ -0.69
CCDC78-213ENST00000482878 IRF2P14316 349 aa10.77□□□□□ -0.69
CCDC78-213ENST00000482878 GABRR1P24046 479 aa10.77□□□□□ -0.69
CCDC78-213ENST00000482878 MSX1P28360 303 aa10.77□□□□□ -0.69
CCDC78-213ENST00000482878 UCP2P55851 309 aa10.77□□□□□ -0.69
CCDC78-213ENST00000482878 CLDN17P56750 224 aa10.77□□□□□ -0.69
CCDC78-213ENST00000482878 ERVS71-1P61550 626 aa10.77□□□□□ -0.69
CCDC78-213ENST00000482878 FBXW12Q6X9E4 464 aa10.77□□□□□ -0.69
CCDC78-213ENST00000482878 IGLV3-12A0A075B6K2 115 aa10.76□□□□□ -0.69
CCDC78-213ENST00000482878 M0QZK8 103 aa10.76□□□□□ -0.69
CCDC78-213ENST00000482878 GGCTO75223 188 aaKnown RBP10.76□□□□□ -0.69
CCDC78-213ENST00000482878 ZNF205O95201 554 aa10.76□□□□□ -0.69
CCDC78-213ENST00000482878 OR5AC1P0C628 307 aa10.76□□□□□ -0.69
CCDC78-213ENST00000482878 GLB1P16278 677 aa10.76□□□□□ -0.69
CCDC78-213ENST00000482878 SSX7Q7RTT5 188 aa10.76□□□□□ -0.69
CCDC78-213ENST00000482878 SLC16A14Q7RTX9 510 aa10.76□□□□□ -0.69
CCDC78-213ENST00000482878 OR2M3Q8NG83 312 aa10.76□□□□□ -0.69
CCDC78-213ENST00000482878 TM2D1Q9BX74 207 aa10.76□□□□□ -0.69
CCDC78-213ENST00000482878 LIME1Q9H400 295 aa10.76□□□□□ -0.69
CCDC78-213ENST00000482878 DNAJC4Q9NNZ3 241 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms