RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 PGPA6NDG6 321 aa1.56□□□□□ -2.16
CALD1-219ENST00000480638 H3BP45 60 aa1.56□□□□□ -2.16
CALD1-219ENST00000480638 M0QXV9 152 aa1.56□□□□□ -2.16
CALD1-219ENST00000480638 SNAI1O95863 264 aaPredicted RBP1.56□□□□□ -2.16
CALD1-219ENST00000480638 SFTPCP11686 197 aa1.56□□□□□ -2.16
CALD1-219ENST00000480638 BLVRBP30043 206 aaPredicted RBP1.56□□□□□ -2.16
CALD1-219ENST00000480638 ZNF140P52738 457 aaPredicted RBP1.56□□□□□ -2.16
CALD1-219ENST00000480638 GOLGA7BQ2TAP0 167 aa1.56□□□□□ -2.16
CALD1-219ENST00000480638 TMEM176BQ3YBM2 270 aaPredicted RBP1.56□□□□□ -2.16
CALD1-219ENST00000480638 RBM45Q8IUH3 476 aaKnown RBP1.56□□□□□ -2.16
CALD1-219ENST00000480638 FER1L6-AS1Q8NA97 138 aa1.56□□□□□ -2.16
CALD1-219ENST00000480638 OR4A15Q8NGL6 344 aa1.56□□□□□ -2.16
CALD1-219ENST00000480638 CLHC1Q8NHS4 586 aa1.56□□□□□ -2.16
CALD1-219ENST00000480638 VAT1Q99536 393 aa1.56□□□□□ -2.16
CALD1-219ENST00000480638 UTP23Q9BRU9 249 aaKnown RBP1.56□□□□□ -2.16
CALD1-219ENST00000480638 SLC25A31Q9H0C2 315 aa1.56□□□□□ -2.16
CALD1-219ENST00000480638 RPUSD1Q9UJJ7 312 aaKnown RBP1.56□□□□□ -2.16
CALD1-219ENST00000480638 LINC00588Q9Y4M8 146 aa1.56□□□□□ -2.16
CALD1-219ENST00000480638 OTOFQ9HC10 1997 aa1.56□□□□□ -2.16
CALD1-219ENST00000480638 MBP02144 154 aa1.55□□□□□ -2.16
CALD1-219ENST00000480638 MMDQ15546 238 aa1.55□□□□□ -2.16
CALD1-219ENST00000480638 ELP2Q6IA86 826 aa1.55□□□□□ -2.16
CALD1-219ENST00000480638 TMEM25Q86YD3 366 aa1.55□□□□□ -2.16
CALD1-219ENST00000480638 DRAXINQ8NBI3 349 aaPredicted RBP1.55□□□□□ -2.16
CALD1-219ENST00000480638 OR11G2Q8NGC1 345 aa1.55□□□□□ -2.16
CALD1-219ENST00000480638 OR4A5Q8NH83 315 aa1.55□□□□□ -2.16
CALD1-219ENST00000480638 HIST1H2BAQ96A08 127 aa1.55□□□□□ -2.16
CALD1-219ENST00000480638 REEP6Q96HR9 211 aa1.55□□□□□ -2.16
CALD1-219ENST00000480638 CPB2Q96IY4 423 aa1.55□□□□□ -2.16
CALD1-219ENST00000480638 MAP1LC3CQ9BXW4 147 aa1.55□□□□□ -2.16
CALD1-219ENST00000480638 NCOR1P1Q9H4R4 102 aa1.55□□□□□ -2.16
CALD1-219ENST00000480638 PHLDA3Q9Y5J5 127 aa1.55□□□□□ -2.16
CALD1-219ENST00000480638 GBF1Q92538 1859 aa1.54□□□□□ -2.16
CALD1-219ENST00000480638 SRCAPQ6ZRS2 3230 aa1.54□□□□□ -2.16
CALD1-219ENST00000480638 PKD1L2Q7Z442 2459 aa1.54□□□□□ -2.16
CALD1-219ENST00000480638 KNCNA6PVL3 124 aa1.54□□□□□ -2.16
CALD1-219ENST00000480638 EEF1E1O43324 174 aaKnown RBP1.54□□□□□ -2.16
CALD1-219ENST00000480638 TCF21O43680 179 aa1.54□□□□□ -2.16
CALD1-219ENST00000480638 KDELR3O43731 214 aa1.54□□□□□ -2.16
CALD1-219ENST00000480638 SOX14O95416 240 aa1.54□□□□□ -2.16
CALD1-219ENST00000480638 EVI2BP34910 448 aa1.54□□□□□ -2.16
CALD1-219ENST00000480638 PLTPP55058 493 aa1.54□□□□□ -2.16
CALD1-219ENST00000480638 GUSBP1Q15486 140 aa1.54□□□□□ -2.16
CALD1-219ENST00000480638 HSP90AA4PQ58FG1 418 aa1.54□□□□□ -2.16
CALD1-219ENST00000480638 OR10P1Q8NGE3 313 aa1.54□□□□□ -2.16
CALD1-219ENST00000480638 BIRC8Q96P09 236 aa1.54□□□□□ -2.16
CALD1-219ENST00000480638 ANKHQ9HCJ1 492 aa1.54□□□□□ -2.16
CALD1-219ENST00000480638 RPRD1BQ9NQG5 326 aaKnown RBP1.54□□□□□ -2.16
CALD1-219ENST00000480638 SDHAF2Q9NX18 166 aa1.54□□□□□ -2.16
CALD1-219ENST00000480638 ATRNO75882 1429 aa1.54□□□□□ -2.16
CALD1-219ENST00000480638 STRCP1A6NGW2 1772 aa1.53□□□□□ -2.16
CALD1-219ENST00000480638 ODF3BA8MYP8 253 aa1.53□□□□□ -2.16
CALD1-219ENST00000480638 GYPCP04921 128 aa1.53□□□□□ -2.16
CALD1-219ENST00000480638 CRABP1P29762 137 aa1.53□□□□□ -2.16
CALD1-219ENST00000480638 C2orf80Q0P641 193 aa1.53□□□□□ -2.16
CALD1-219ENST00000480638 ACSBG2Q5FVE4 666 aa1.53□□□□□ -2.16
CALD1-219ENST00000480638 PRRC2BQ5JSZ5 2229 aaKnown RBP1.53□□□□□ -2.16
CALD1-219ENST00000480638 RESP18Q5W5W9 173 aa1.53□□□□□ -2.16
CALD1-219ENST00000480638 FAM19A1Q7Z5A9 133 aa1.53□□□□□ -2.16
CALD1-219ENST00000480638 KCNIP2Q9NS61 270 aa1.53□□□□□ -2.16
CALD1-219ENST00000480638 VAPAQ9P0L0 249 aa1.53□□□□□ -2.16
CALD1-219ENST00000480638 ADAMTS7Q9UKP4 1686 aa1.53□□□□□ -2.16
CALD1-219ENST00000480638 KMT2BQ9UMN6 2715 aaPredicted RBP1.53□□□□□ -2.17
CALD1-219ENST00000480638 MPDZO75970 2070 aa1.52□□□□□ -2.17
CALD1-219ENST00000480638 ATG2BQ96BY7 2078 aa1.52□□□□□ -2.17
CALD1-219ENST00000480638 GCLMP48507 274 aa1.52□□□□□ -2.17
CALD1-219ENST00000480638 TTPAP49638 278 aa1.52□□□□□ -2.17
CALD1-219ENST00000480638 RAB25P57735 213 aa1.52□□□□□ -2.17
CALD1-219ENST00000480638 C10orf107Q8IVU9 208 aa1.52□□□□□ -2.17
CALD1-219ENST00000480638 KRTCAP2Q8N6L1 136 aa1.52□□□□□ -2.17
CALD1-219ENST00000480638 ZIC4Q8N9L1 334 aa1.52□□□□□ -2.17
CALD1-219ENST00000480638 OR6N2Q8NGY6 317 aa1.52□□□□□ -2.17
CALD1-219ENST00000480638 KCTD4Q8WVF5 259 aa1.52□□□□□ -2.17
CALD1-219ENST00000480638 DDIT4LQ96D03 193 aa1.52□□□□□ -2.17
CALD1-219ENST00000480638 TDRD3Q9H7E2 651 aaKnown RBP1.52□□□□□ -2.17
CALD1-219ENST00000480638 CRLF2Q9HC73 371 aa1.52□□□□□ -2.17
CALD1-219ENST00000480638 DIABLOQ9NR28 239 aa1.52□□□□□ -2.17
CALD1-219ENST00000480638 TAS2R9Q9NYW1 312 aa1.52□□□□□ -2.17
CALD1-219ENST00000480638 YLPM1P49750 1951 aaKnown RBP1.52□□□□□ -2.17
CALD1-219ENST00000480638 IGHV2-26A0A0B4J1V2 119 aa1.51□□□□□ -2.17
CALD1-219ENST00000480638 LOC102725191A0A1B0GVB3 256 aa1.51□□□□□ -2.17
CALD1-219ENST00000480638 RFXANKO14593 260 aa1.51□□□□□ -2.17
CALD1-219ENST00000480638 SLC25A20O43772 301 aa1.51□□□□□ -2.17
CALD1-219ENST00000480638 CA2P00918 260 aa1.51□□□□□ -2.17
CALD1-219ENST00000480638 RAB38P57729 211 aa1.51□□□□□ -2.17
CALD1-219ENST00000480638 STX4Q12846 297 aa1.51□□□□□ -2.17
CALD1-219ENST00000480638 CEACAM21Q3KPI0 293 aa1.51□□□□□ -2.17
CALD1-219ENST00000480638 SLC25A25Q6KCM7 469 aa1.51□□□□□ -2.17
CALD1-219ENST00000480638 OR4C16Q8NGL9 310 aa1.51□□□□□ -2.17
CALD1-219ENST00000480638 GPR119Q8TDV5 335 aa1.51□□□□□ -2.17
CALD1-219ENST00000480638 CASTOR1Q8WTX7 329 aa1.51□□□□□ -2.17
CALD1-219ENST00000480638 NELFBQ8WX92 580 aa1.51□□□□□ -2.17
CALD1-219ENST00000480638 DNAJC30Q96LL9 226 aa1.51□□□□□ -2.17
CALD1-219ENST00000480638 CXCL16Q9H2A7 254 aa1.51□□□□□ -2.17
CALD1-219ENST00000480638 GAL3ST2Q9H3Q3 398 aa1.51□□□□□ -2.17
CALD1-219ENST00000480638 C19orf71A6NCJ1 209 aa1.5□□□□□ -2.17
CALD1-219ENST00000480638 ERICH4A6NGS2 130 aa1.5□□□□□ -2.17
CALD1-219ENST00000480638 ENSAO43768 121 aaKnown RBP1.5□□□□□ -2.17
CALD1-219ENST00000480638 SPOPO43791 374 aa1.5□□□□□ -2.17
CALD1-219ENST00000480638 ZNF189O75820 626 aaPredicted RBP1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms