RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 HPGDP15428 266 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 NPR2P20594 1047 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 FKBP2P26885 142 aaKnown RBP3.79□□□□□ -1.8
UPF3A-205ENST00000479712 IL12AP29459 219 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 P2RX1P51575 399 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 BAMBIQ13145 260 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 PLPPR5Q32ZL2 321 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 ARHGAP11BQ3KRB8 267 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 OR2G6Q5TZ20 316 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 EPGNQ6UW88 154 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 C6orf120Q7Z4R8 191 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 MARCH3Q86UD3 253 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 VRK2Q86Y07 508 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 FTMTQ8N4E7 242 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 TMEM252Q8N6L7 170 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 CDS1Q92903 461 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 SLC35B4Q969S0 331 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 SLC35G5Q96KT7 338 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 TRNT1Q96Q11 434 aaKnown RBP3.79□□□□□ -1.8
UPF3A-205ENST00000479712 OR7D2Q96RA2 312 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 SDF2Q99470 211 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 PAIP2Q9BPZ3 127 aaKnown RBP3.79□□□□□ -1.8
UPF3A-205ENST00000479712 DSN1Q9H410 356 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 NTN4Q9HB63 628 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 BEX1Q9HBH7 125 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 GLRX2Q9NS18 164 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 TNFRSF19Q9NS68 423 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 TREM2Q9NZC2 230 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 CALML5Q9NZT1 146 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 SLC35A3Q9Y2D2 325 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 USH1CQ9Y6N9 552 aa3.79□□□□□ -1.8
UPF3A-205ENST00000479712 DSPPQ9NZW4 1301 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 PPIAL4EA0A075B759 164 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 A0A0G2JRQ6 117 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 GOLGA8OA6NCC3 632 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 SLC22A20A6NK97 555 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 GJE1A6NN92 205 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 GOLGA8NF8WBI6 632 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 FAAHO00519 579 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 HSD17B6O14756 317 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 POLR3GO15318 223 aaPredicted RBP3.78□□□□□ -1.8
UPF3A-205ENST00000479712 ATP8B1O43520 1251 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 SRSF10O75494 262 aaKnown RBP3.78□□□□□ -1.8
UPF3A-205ENST00000479712 LGI1O95970 557 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 IGHV3-48P01763 117 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 PABPC4LP0CB38 370 aaKnown RBP3.78□□□□□ -1.8
UPF3A-205ENST00000479712 PPIAL4FP0DN26 164 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 ATP6V1B2P21281 511 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 RPS4Y1P22090 263 aaKnown RBP3.78□□□□□ -1.8
UPF3A-205ENST00000479712 PPIBP23284 216 aaKnown RBP3.78□□□□□ -1.8
UPF3A-205ENST00000479712 DDOSTP39656 456 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 POLR2JP52435 117 aaKnown RBP3.78□□□□□ -1.8
UPF3A-205ENST00000479712 ZNF45Q02386 682 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 SELENBP1Q13228 472 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 GNA13Q14344 377 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 GUSBP1Q15486 140 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 KRTAP27-1Q3LI81 207 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 TTMPQ5BVD1 217 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 KLF17Q5JT82 389 aaPredicted RBP3.78□□□□□ -1.8
UPF3A-205ENST00000479712 RAET1LQ5VY80 246 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 METTL21CQ5VZV1 264 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 LRRC74BQ6ZQY2 392 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 EIF3MQ7L2H7 374 aaKnown RBP3.78□□□□□ -1.8
UPF3A-205ENST00000479712 TMEM179BQ7Z7N9 219 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 ZNF100Q8IYN0 542 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 CLECL1Q8IZS7 167 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 LINC00612Q8N6U2 182 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 OR4A15Q8NGL6 344 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 OR5W2Q8NH69 310 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 GPR119Q8TDV5 335 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 ZFP90Q8TF47 636 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 DNAJA4Q8WW22 397 aaPredicted RBP3.78□□□□□ -1.8
UPF3A-205ENST00000479712 TMEM234Q8WY98 164 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 CHCHD10Q8WYQ3 142 aaPredicted RBP3.78□□□□□ -1.8
UPF3A-205ENST00000479712 RASD2Q96D21 266 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 ITCHQ96J02 903 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 MAGEB18Q96M61 343 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 OR52E6Q96RD3 313 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 PANX1Q96RD7 426 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 PPA2Q9H2U2 334 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 OR51I1Q9H343 314 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 ANKRD19PQ9H560 264 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 WDR55Q9H6Y2 383 aaPredicted RBP3.78□□□□□ -1.8
UPF3A-205ENST00000479712 RNF122Q9H9V4 155 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 MED11Q9P086 117 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 MARCOQ9UEW3 520 aaPredicted RBP3.78□□□□□ -1.8
UPF3A-205ENST00000479712 ZNF337Q9Y3M9 751 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 UGT2A1Q9Y4X1 527 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 PEX16Q9Y5Y5 336 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 V9GY05 133 aa3.78□□□□□ -1.8
UPF3A-205ENST00000479712 A0A096LPI6 279 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 GOLGA8QA0A0J9YX86 632 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 CLPSL1A2RUU4 121 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 ZFP92A6NM28 416 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 HMGN4O00479 90 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 RFXANKO14593 260 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 EDF1O60869 148 aaKnown RBP3.77□□□□□ -1.81
UPF3A-205ENST00000479712 SS18L1O75177 396 aaPredicted RBP3.77□□□□□ -1.81
UPF3A-205ENST00000479712 TNFSF13O75888 250 aa3.77□□□□□ -1.81
UPF3A-205ENST00000479712 CPSF4O95639 269 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms