RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 GPX4P36969 197 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-209ENST00000479532 CDKN1AP38936 164 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 PSMB10P40306 273 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 ALDH3B1P43353 468 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 SRP9P49458 86 aaKnown RBP5.24□□□□□ -1.57
SF3B1-209ENST00000479532 ATP5J2P56134 94 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 FAM3AP98173 230 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 BDH1Q02338 343 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 MFGE8Q08431 387 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-209ENST00000479532 MLLT11Q13015 90 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-209ENST00000479532 GAGE1Q13065 139 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 HLXQ14774 488 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-209ENST00000479532 OPCMLQ14982 345 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 SPHARQ15513 63 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 OR8G1Q15617 311 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 ODF4Q2M2E3 257 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 DEFB113Q30KQ7 82 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 ALKBH6Q3KRA9 238 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 PAN3Q58A45 887 aaKnown RBP5.24□□□□□ -1.57
SF3B1-209ENST00000479532 WDR38Q5JTN6 314 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 OR2G6Q5TZ20 316 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 C11orf71Q6IPW1 123 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 BAIAP2L2Q6UXY1 529 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 Q6ZSN1 163 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 PRSS45Q7RTY3 260 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 LRP11Q86VZ4 500 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 OR5AS1Q8N127 324 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 LRRC75A-AS1Q8N1F1 130 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 NANOGP1Q8N7R0 232 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 BHLHE23Q8NDY6 225 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 OR2Z1Q8NG97 314 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 OR56B2PQ8NGI1 322 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 OR13C3Q8NGS6 347 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 OR2G2Q8NGZ5 317 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 OR8S1Q8NH09 359 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 Q8TCH9 128 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 THRSPQ92748 146 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 C10orf35Q96D05 121 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 R3HDM4Q96D70 268 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 MALSU1Q96EH3 234 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 MRPS24Q96EL2 167 aaKnown RBP5.24□□□□□ -1.57
SF3B1-209ENST00000479532 FAM71F1Q96KD3 344 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-209ENST00000479532 MGLLQ99685 303 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 RHNO1Q9BSD3 238 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 ADAT1Q9BUB4 502 aaKnown RBP5.24□□□□□ -1.57
SF3B1-209ENST00000479532 TMED9Q9BVK6 235 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 DPCDQ9BVM2 203 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-209ENST00000479532 OR51J1Q9H342 316 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 DPAGT1Q9H3H5 408 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 TUBA4BQ9H853 241 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 ISG20L2Q9H9L3 353 aaKnown RBP5.24□□□□□ -1.57
SF3B1-209ENST00000479532 NIT2Q9NQR4 276 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 G6PC2Q9NQR9 355 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 GPR84Q9NQS5 396 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 MRPL15Q9P015 296 aaKnown RBP5.24□□□□□ -1.57
SF3B1-209ENST00000479532 HHLA2Q9UM44 414 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 SLC22A13Q9Y226 551 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 ADGRG4Q8IZF6 3080 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 COL12A1Q99715 3063 aa5.24□□□□□ -1.57
SF3B1-209ENST00000479532 CADP27708 2225 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 LOC107986453A0A1B0GWG9 222 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 RFPL4AA6NLU0 287 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 RFPL4AL1F8VTS6 287 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 SPRY3O43610 288 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 GATBO75879 557 aaKnown RBP5.23□□□□□ -1.57
SF3B1-209ENST00000479532 PNPP00491 289 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 CD8AP01732 235 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 CD2P06729 351 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 UBBP0CG47 229 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 ACHEP22303 614 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 MNDAP41218 407 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 PTH2RP49190 550 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 RBP2P50120 134 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 RAB5CP51148 216 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 MMP15P51511 669 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 ZNF134P52741 427 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 EFNA4P52798 201 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 DSCR9P59020 149 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 KRTAP10-9P60411 292 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 RPS27AP62979 156 aaKnown RBP5.23□□□□□ -1.57
SF3B1-209ENST00000479532 UBA52P62987 128 aaKnown RBP5.23□□□□□ -1.57
SF3B1-209ENST00000479532 TNFAIP6P98066 277 aaPredicted RBP5.23□□□□□ -1.57
SF3B1-209ENST00000479532 SLC3A1Q07837 685 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 ACSM1Q08AH1 577 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 CDK5R1Q15078 307 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 OR8B8Q15620 311 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 TRAM1Q15629 374 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 TSTQ16762 297 aaKnown RBP5.23□□□□□ -1.57
SF3B1-209ENST00000479532 PYDC2Q56P42 97 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 HAGHLQ6PII5 290 aaPredicted RBP5.23□□□□□ -1.57
SF3B1-209ENST00000479532 C17orf107Q6ZR85 190 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 ANGPTL5Q86XS5 388 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 LAX1Q8IWV1 398 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 ZDHHC23Q8IYP9 409 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 PRSS35Q8N3Z0 413 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 Q8N402 240 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 ZNF561Q8N587 486 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 C15orf54Q8N8G6 183 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 BEND2Q8NDZ0 799 aa5.23□□□□□ -1.57
SF3B1-209ENST00000479532 OR56B4Q8NH76 319 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms