RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 IGHV2-5P01817 119 aa10.86□□□□□ -0.67
CHD3-210ENST00000479080 CSN2P05814 226 aa10.86□□□□□ -0.67
CHD3-210ENST00000479080 GLAP06280 429 aa10.86□□□□□ -0.67
CHD3-210ENST00000479080 GLIPR1P48060 266 aa10.86□□□□□ -0.67
CHD3-210ENST00000479080 IL13RA1P78552 427 aa10.86□□□□□ -0.67
CHD3-210ENST00000479080 IFITM3Q01628 133 aa10.86□□□□□ -0.67
CHD3-210ENST00000479080 PAX5Q02548 391 aa10.86□□□□□ -0.67
CHD3-210ENST00000479080 GRK1Q15835 563 aa10.86□□□□□ -0.67
CHD3-210ENST00000479080 BAK1Q16611 211 aa10.86□□□□□ -0.67
CHD3-210ENST00000479080 Q5PR19 223 aa10.86□□□□□ -0.67
CHD3-210ENST00000479080 ZNF880Q6PDB4 577 aa10.86□□□□□ -0.67
CHD3-210ENST00000479080 CLEC2AQ6UVW9 174 aa10.86□□□□□ -0.67
CHD3-210ENST00000479080 BAIAP2L2Q6UXY1 529 aa10.86□□□□□ -0.67
CHD3-210ENST00000479080 ZNF497Q6ZNH5 498 aa10.86□□□□□ -0.67
CHD3-210ENST00000479080 OR8H2Q8N162 312 aa10.86□□□□□ -0.67
CHD3-210ENST00000479080 MUC20Q8N307 709 aaPredicted RBP10.86□□□□□ -0.67
CHD3-210ENST00000479080 GVQW1Q8N7I0 195 aa10.86□□□□□ -0.67
CHD3-210ENST00000479080 TMEM185AQ8NFB2 350 aa10.86□□□□□ -0.67
CHD3-210ENST00000479080 MAFIPQ8WZ33 124 aa10.86□□□□□ -0.67
CHD3-210ENST00000479080 TIMD4Q96H15 378 aa10.86□□□□□ -0.67
CHD3-210ENST00000479080 SPACA1Q9HBV2 294 aa10.86□□□□□ -0.67
CHD3-210ENST00000479080 TEP1Q99973 2627 aaKnown RBP10.86□□□□□ -0.67
CHD3-210ENST00000479080 ITPR2Q14571 2701 aa10.86□□□□□ -0.67
CHD3-210ENST00000479080 MEX3AA1L020 520 aaKnown RBP10.85□□□□□ -0.67
CHD3-210ENST00000479080 SERPINE3A8MV23 424 aa10.85□□□□□ -0.67
CHD3-210ENST00000479080 KIAA1324LA8MWY0 1029 aaPredicted RBP10.85□□□□□ -0.67
CHD3-210ENST00000479080 NDUFS8O00217 210 aa10.85□□□□□ -0.67
CHD3-210ENST00000479080 MGST3O14880 152 aa10.85□□□□□ -0.67
CHD3-210ENST00000479080 GSTZ1O43708 216 aaPredicted RBP10.85□□□□□ -0.67
CHD3-210ENST00000479080 TPPPO94811 219 aa10.85□□□□□ -0.67
CHD3-210ENST00000479080 FCGR3AP08637 254 aa10.85□□□□□ -0.67
CHD3-210ENST00000479080 CSF3P09919 207 aa10.85□□□□□ -0.67
CHD3-210ENST00000479080 RPS2P15880 293 aaKnown RBP10.85□□□□□ -0.67
CHD3-210ENST00000479080 PTBP1P26599 531 aaKnown RBP eCLIP10.85□□□□□ -0.67
CHD3-210ENST00000479080 TALDO1P37837 337 aa10.85□□□□□ -0.67
CHD3-210ENST00000479080 AESQ08117 197 aa10.85□□□□□ -0.67
CHD3-210ENST00000479080 FAM189A2Q15884 450 aa10.85□□□□□ -0.67
CHD3-210ENST00000479080 PNLIPRP3Q17RR3 467 aa10.85□□□□□ -0.67
CHD3-210ENST00000479080 SPANXN2Q5MJ10 180 aa10.85□□□□□ -0.67
CHD3-210ENST00000479080 PEG10Q86TG7 708 aaKnown RBP10.85□□□□□ -0.67
CHD3-210ENST00000479080 SMIM4Q8WVI0 70 aa10.85□□□□□ -0.67
CHD3-210ENST00000479080 SNAPC3Q92966 411 aa10.85□□□□□ -0.67
CHD3-210ENST00000479080 TSC22D3Q99576 134 aa10.85□□□□□ -0.67
CHD3-210ENST00000479080 PIMREGQ9BSJ6 248 aa10.85□□□□□ -0.67
CHD3-210ENST00000479080 ING3Q9NXR8 418 aa10.85□□□□□ -0.67
CHD3-210ENST00000479080 ETAA1Q9NY74 926 aa10.85□□□□□ -0.67
CHD3-210ENST00000479080 GLS2Q9UI32 602 aa10.85□□□□□ -0.67
CHD3-210ENST00000479080 ZNF230Q9UIE0 474 aaPredicted RBP10.85□□□□□ -0.67
CHD3-210ENST00000479080 KIF25Q9UIL4 384 aa10.85□□□□□ -0.67
CHD3-210ENST00000479080 RBMX2Q9Y388 322 aaKnown RBP10.85□□□□□ -0.67
CHD3-210ENST00000479080 TRBV6-6A0A0A6YYG2 114 aa10.84□□□□□ -0.67
CHD3-210ENST00000479080 C22orf46C9J442 243 aa10.84□□□□□ -0.67
CHD3-210ENST00000479080 MCRIP1C9JLW8 97 aa10.84□□□□□ -0.67
CHD3-210ENST00000479080 NDUFA2O43678 99 aa10.84□□□□□ -0.67
CHD3-210ENST00000479080 MT-ND4P03905 459 aa10.84□□□□□ -0.67
CHD3-210ENST00000479080 FCER2P06734 321 aa10.84□□□□□ -0.67
CHD3-210ENST00000479080 CD3GP09693 182 aa10.84□□□□□ -0.67
CHD3-210ENST00000479080 ZFP36P26651 326 aaKnown RBP10.84□□□□□ -0.67
CHD3-210ENST00000479080 CD40LGP29965 261 aa10.84□□□□□ -0.67
CHD3-210ENST00000479080 P2RX3P56373 397 aa10.84□□□□□ -0.67
CHD3-210ENST00000479080 ZNF45Q02386 682 aa10.84□□□□□ -0.67
CHD3-210ENST00000479080 EDDM3AQ14507 147 aa10.84□□□□□ -0.67
CHD3-210ENST00000479080 WDR25Q64LD2 544 aaPredicted RBP10.84□□□□□ -0.67
CHD3-210ENST00000479080 SLC35E4Q6ICL7 350 aa10.84□□□□□ -0.67
CHD3-210ENST00000479080 SLC36A1Q7Z2H8 476 aa10.84□□□□□ -0.67
CHD3-210ENST00000479080 TRAPPC6BQ86SZ2 158 aa10.84□□□□□ -0.67
CHD3-210ENST00000479080 SPICQ8N5J4 248 aa10.84□□□□□ -0.67
CHD3-210ENST00000479080 OR13A1Q8NGR1 328 aa10.84□□□□□ -0.67
CHD3-210ENST00000479080 OR4K15Q8NH41 348 aa10.84□□□□□ -0.67
CHD3-210ENST00000479080 S100ZQ8WXG8 99 aa10.84□□□□□ -0.67
CHD3-210ENST00000479080 DACT3Q96B18 629 aaPredicted RBP10.84□□□□□ -0.67
CHD3-210ENST00000479080 PHF21AQ96BD5 680 aa10.84□□□□□ -0.67
CHD3-210ENST00000479080 NEIL1Q96FI4 390 aaPredicted RBP10.84□□□□□ -0.67
CHD3-210ENST00000479080 MED30Q96HR3 178 aa10.84□□□□□ -0.67
CHD3-210ENST00000479080 CMSS1Q9BQ75 279 aaKnown RBP10.84□□□□□ -0.67
CHD3-210ENST00000479080 FAM234AQ9H0X4 552 aa10.84□□□□□ -0.67
CHD3-210ENST00000479080 C19orf12Q9NSK7 152 aa10.84□□□□□ -0.67
CHD3-210ENST00000479080 SLC25A10Q9UBX3 287 aaPredicted RBP10.84□□□□□ -0.67
CHD3-210ENST00000479080 KLK11Q9UBX7 282 aa10.84□□□□□ -0.67
CHD3-210ENST00000479080 TEX15Q9BXT5 2789 aa10.83□□□□□ -0.68
CHD3-210ENST00000479080 ANKRD17O75179 2603 aaKnown RBP10.83□□□□□ -0.68
CHD3-210ENST00000479080 FAM157AC9JC47 383 aa10.83□□□□□ -0.68
CHD3-210ENST00000479080 GABARAPH6UMI1 98 aa10.83□□□□□ -0.68
CHD3-210ENST00000479080 PHF1O43189 567 aaPredicted RBP10.83□□□□□ -0.68
CHD3-210ENST00000479080 CGB3P0DN86 165 aa10.83□□□□□ -0.68
CHD3-210ENST00000479080 CGB7P0DN87 165 aa10.83□□□□□ -0.68
CHD3-210ENST00000479080 NAT1P18440 290 aa10.83□□□□□ -0.68
CHD3-210ENST00000479080 RCC1P18754 421 aaPredicted RBP10.83□□□□□ -0.68
CHD3-210ENST00000479080 PRSS3P35030 304 aa10.83□□□□□ -0.68
CHD3-210ENST00000479080 KCNJ3P48549 501 aa10.83□□□□□ -0.68
CHD3-210ENST00000479080 PPP5CP53041 499 aa10.83□□□□□ -0.68
CHD3-210ENST00000479080 DSCR9P59020 149 aa10.83□□□□□ -0.68
CHD3-210ENST00000479080 GNG2P59768 71 aa10.83□□□□□ -0.68
CHD3-210ENST00000479080 PAX2Q02962 417 aa10.83□□□□□ -0.68
CHD3-210ENST00000479080 ZNF273Q14593 569 aa10.83□□□□□ -0.68
CHD3-210ENST00000479080 ZNF846Q147U1 533 aa10.83□□□□□ -0.68
CHD3-210ENST00000479080 KCNJ8Q15842 424 aa10.83□□□□□ -0.68
CHD3-210ENST00000479080 PYDC2Q56P42 97 aa10.83□□□□□ -0.68
CHD3-210ENST00000479080 KRBOX4Q5JUW0 171 aa10.83□□□□□ -0.68
CHD3-210ENST00000479080 WFDC11Q8NEX6 87 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms