RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 EGFEM1PQ0D2K5 195 aa10.51□□□□□ -0.73
VCL-205ENST00000478896 DCTN2Q13561 401 aaKnown RBP10.51□□□□□ -0.73
VCL-205ENST00000478896 ALKBH1Q13686 389 aaKnown RBP10.51□□□□□ -0.73
VCL-205ENST00000478896 PAN3Q58A45 887 aaKnown RBP10.51□□□□□ -0.73
VCL-205ENST00000478896 LPCAT4Q643R3 524 aa10.51□□□□□ -0.73
VCL-205ENST00000478896 Q6P435 159 aa10.51□□□□□ -0.73
VCL-205ENST00000478896 FDX2Q6P4F2 183 aa10.51□□□□□ -0.73
VCL-205ENST00000478896 C8orf86Q6ZUL3 223 aa10.51□□□□□ -0.73
VCL-205ENST00000478896 RNF144BQ7Z419 303 aa10.51□□□□□ -0.73
VCL-205ENST00000478896 MRPL41Q8IXM3 137 aaKnown RBP10.51□□□□□ -0.73
VCL-205ENST00000478896 DRAM1Q8N682 238 aa10.51□□□□□ -0.73
VCL-205ENST00000478896 ZNF565Q8N9K5 539 aa10.51□□□□□ -0.73
VCL-205ENST00000478896 KLHL30-AS1Q8NEE0 82 aa10.51□□□□□ -0.73
VCL-205ENST00000478896 LEAP2Q969E1 77 aa10.51□□□□□ -0.73
VCL-205ENST00000478896 RNF166Q96A37 237 aaPredicted RBP10.51□□□□□ -0.73
VCL-205ENST00000478896 MRPL48Q96GC5 212 aaKnown RBP10.51□□□□□ -0.73
VCL-205ENST00000478896 NOL4LQ96MY1 436 aaPredicted RBP10.51□□□□□ -0.73
VCL-205ENST00000478896 NR1H4Q96RI1 486 aaPredicted RBP10.51□□□□□ -0.73
VCL-205ENST00000478896 MCRIP2Q9BUT9 160 aaKnown RBP10.51□□□□□ -0.73
VCL-205ENST00000478896 CALYQ9NYX4 217 aa10.51□□□□□ -0.73
VCL-205ENST00000478896 MYRFQ9Y2G1 1151 aa10.51□□□□□ -0.73
VCL-205ENST00000478896 J3QR06 171 aa10.5□□□□□ -0.73
VCL-205ENST00000478896 SULT1B1O43704 296 aa10.5□□□□□ -0.73
VCL-205ENST00000478896 C21orf33P30042 268 aaPredicted RBP10.5□□□□□ -0.73
VCL-205ENST00000478896 MTNR1BP49286 362 aa10.5□□□□□ -0.73
VCL-205ENST00000478896 THBS3P49746 956 aa10.5□□□□□ -0.73
VCL-205ENST00000478896 SLC35B1P78383 322 aa10.5□□□□□ -0.73
VCL-205ENST00000478896 MADCAM1Q13477 382 aa10.5□□□□□ -0.73
VCL-205ENST00000478896 UTF1Q5T230 341 aa10.5□□□□□ -0.73
VCL-205ENST00000478896 ETV3LQ6ZN32 361 aa10.5□□□□□ -0.73
VCL-205ENST00000478896 OR2W3Q7Z3T1 314 aa10.5□□□□□ -0.73
VCL-205ENST00000478896 THNSL2Q86YJ6 484 aa10.5□□□□□ -0.73
VCL-205ENST00000478896 C5orf56Q8N8D9 126 aa10.5□□□□□ -0.73
VCL-205ENST00000478896 OR13A1Q8NGR1 328 aa10.5□□□□□ -0.73
VCL-205ENST00000478896 TSEN15Q8WW01 171 aaKnown RBP10.5□□□□□ -0.73
VCL-205ENST00000478896 PELI1Q96FA3 418 aa10.5□□□□□ -0.73
VCL-205ENST00000478896 CPNE2Q96FN4 548 aaPredicted RBP10.5□□□□□ -0.73
VCL-205ENST00000478896 CENPNQ96H22 339 aaPredicted RBP10.5□□□□□ -0.73
VCL-205ENST00000478896 MYCBPQ99417 103 aaPredicted RBP10.5□□□□□ -0.73
VCL-205ENST00000478896 GPER1Q99527 375 aa10.5□□□□□ -0.73
VCL-205ENST00000478896 OSBPL10Q9BXB5 764 aa10.5□□□□□ -0.73
VCL-205ENST00000478896 BARHL1Q9BZE3 327 aa10.5□□□□□ -0.73
VCL-205ENST00000478896 FAM192AQ9GZU8 254 aa10.5□□□□□ -0.73
VCL-205ENST00000478896 IDI2-AS1Q9NZ38 188 aa10.5□□□□□ -0.73
VCL-205ENST00000478896 KIF25Q9UIL4 384 aa10.5□□□□□ -0.73
VCL-205ENST00000478896 LINC00527Q9UJ94 153 aa10.5□□□□□ -0.73
VCL-205ENST00000478896 ORC6Q9Y5N6 252 aa10.5□□□□□ -0.73
VCL-205ENST00000478896 A0A1W2PPI3 338 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 SNTNA6NMZ2 147 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 MAGEB3O15480 346 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 IL1AP01583 271 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 IGKV1D-33P01593 117 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 IGKV1-33P01594 117 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 RASSF2P50749 326 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 RAB7AP51149 207 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 RAB25P57735 213 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 ZP1P60852 638 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 HNF4GQ14541 408 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 CDK5R1Q15078 307 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 KISS1Q15726 138 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 ZSCAN26Q16670 478 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 ZNF691Q5VV52 312 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 MEDAGQ5VYS4 303 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 UNQ9370/PRO34162Q6UXP9 181 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 C18orf65Q6ZTR6 163 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 SLC35E3Q7Z769 313 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 SERPINA12Q8IW75 414 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 FOXRED2Q8IWF2 684 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 ACBD7Q8N6N7 88 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 OR51T1Q8NGJ9 327 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 OR5D14Q8NGL3 314 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 OR10X1Q8NGY0 326 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 HAVCR2Q8TDQ0 301 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 MRGPRDQ8TDS7 321 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 TRUB1Q8WWH5 349 aaKnown RBP10.49□□□□□ -0.73
VCL-205ENST00000478896 B9D2Q9BPU9 175 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 ALG8Q9BVK2 526 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 ZFP57Q9NU63 452 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 DHDHQ9UQ10 334 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 PSG11Q9UQ72 335 aa10.49□□□□□ -0.73
VCL-205ENST00000478896 FAM90A18PA6NE21 464 aa10.48□□□□□ -0.73
VCL-205ENST00000478896 FAM90A16PA6NEW6 464 aa10.48□□□□□ -0.73
VCL-205ENST00000478896 FAM90A20PA6NIJ5 464 aa10.48□□□□□ -0.73
VCL-205ENST00000478896 OR4C45A6NMZ5 311 aa10.48□□□□□ -0.73
VCL-205ENST00000478896 FAM90A9PA6NNJ1 464 aa10.48□□□□□ -0.73
VCL-205ENST00000478896 FAM90A12PA8MX19 464 aa10.48□□□□□ -0.73
VCL-205ENST00000478896 FAM90A5PA8MXJ8 464 aa10.48□□□□□ -0.73
VCL-205ENST00000478896 FGF16O43320 207 aa10.48□□□□□ -0.73
VCL-205ENST00000478896 FAM90A15PP0C7V4 464 aa10.48□□□□□ -0.73
VCL-205ENST00000478896 FAM90A13PP0C7W8 464 aa10.48□□□□□ -0.73
VCL-205ENST00000478896 FAM90A14PP0C7W9 464 aa10.48□□□□□ -0.73
VCL-205ENST00000478896 FAM90A24PP0C7X0 464 aa10.48□□□□□ -0.73
VCL-205ENST00000478896 VSIG8P0DPA2 414 aa10.48□□□□□ -0.73
VCL-205ENST00000478896 SLC6A1P30531 599 aa10.48□□□□□ -0.73
VCL-205ENST00000478896 SSTR5P35346 364 aa10.48□□□□□ -0.73
VCL-205ENST00000478896 MYCNOSP40205 109 aa10.48□□□□□ -0.73
VCL-205ENST00000478896 DIAPH2-AS1Q14236 149 aa10.48□□□□□ -0.73
VCL-205ENST00000478896 SATL1Q86VE3 508 aa10.48□□□□□ -0.73
VCL-205ENST00000478896 OR8H3Q8N146 312 aa10.48□□□□□ -0.73
VCL-205ENST00000478896 RFESDQ8TAC1 157 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms