RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 BEND2Q8NDZ0 799 aa12.67□□□□□ -0.38
HMGA1-206ENST00000478214 CORO2AQ92828 525 aa12.67□□□□□ -0.38
HMGA1-206ENST00000478214 MGLLQ99685 303 aa12.67□□□□□ -0.38
HMGA1-206ENST00000478214 DPAGT1Q9H3H5 408 aa12.67□□□□□ -0.38
HMGA1-206ENST00000478214 Q9H521 79 aa12.67□□□□□ -0.38
HMGA1-206ENST00000478214 TCF7L1Q9HCS4 588 aa12.67□□□□□ -0.38
HMGA1-206ENST00000478214 SESN1Q9Y6P5 492 aa12.67□□□□□ -0.38
HMGA1-206ENST00000478214 MEGF11A6BM72 1044 aa12.66□□□□□ -0.38
HMGA1-206ENST00000478214 ODF3BA8MYP8 253 aa12.66□□□□□ -0.38
HMGA1-206ENST00000478214 DENRO43583 198 aaKnown RBP12.66□□□□□ -0.38
HMGA1-206ENST00000478214 GPR137BO60478 399 aa12.66□□□□□ -0.38
HMGA1-206ENST00000478214 UCHL1P09936 223 aa12.66□□□□□ -0.38
HMGA1-206ENST00000478214 GTF2F2P13984 249 aa12.66□□□□□ -0.38
HMGA1-206ENST00000478214 CPEP16870 476 aa12.66□□□□□ -0.38
HMGA1-206ENST00000478214 OMGP23515 440 aa12.66□□□□□ -0.38
HMGA1-206ENST00000478214 LGALS4P56470 323 aa12.66□□□□□ -0.38
HMGA1-206ENST00000478214 FOXL1Q12952 345 aa12.66□□□□□ -0.38
HMGA1-206ENST00000478214 GPR176Q14439 515 aa12.66□□□□□ -0.38
HMGA1-206ENST00000478214 TBCEQ15813 527 aaPredicted RBP12.66□□□□□ -0.38
HMGA1-206ENST00000478214 HSD17B12Q53GQ0 312 aa12.66□□□□□ -0.38
HMGA1-206ENST00000478214 PRAMEF5Q5TYX0 476 aa12.66□□□□□ -0.38
HMGA1-206ENST00000478214 TMEM91Q6ZNR0 172 aa12.66□□□□□ -0.38
HMGA1-206ENST00000478214 SUMF2Q8NBJ7 301 aa12.66□□□□□ -0.38
HMGA1-206ENST00000478214 OR11H6Q8NGC7 330 aa12.66□□□□□ -0.38
HMGA1-206ENST00000478214 PLPPR1Q8TBJ4 325 aa12.66□□□□□ -0.38
HMGA1-206ENST00000478214 DPCDQ9BVM2 203 aaPredicted RBP12.66□□□□□ -0.38
HMGA1-206ENST00000478214 TMEM133Q9H2Q1 129 aa12.66□□□□□ -0.38
HMGA1-206ENST00000478214 GAL3ST2Q9H3Q3 398 aa12.66□□□□□ -0.38
HMGA1-206ENST00000478214 PCDHB16Q9NRJ7 776 aa12.66□□□□□ -0.38
HMGA1-206ENST00000478214 TAS2R3Q9NYW6 316 aa12.66□□□□□ -0.38
HMGA1-206ENST00000478214 KIF25Q9UIL4 384 aa12.66□□□□□ -0.38
HMGA1-206ENST00000478214 DSCAML1Q8TD84 2053 aa12.66□□□□□ -0.38
HMGA1-206ENST00000478214 MEIKINA0A087WXM9 373 aa12.65□□□□□ -0.38
HMGA1-206ENST00000478214 ARG1P05089 322 aa12.65□□□□□ -0.38
HMGA1-206ENST00000478214 SRMP19623 302 aa12.65□□□□□ -0.38
HMGA1-206ENST00000478214 CDK2P24941 298 aa12.65□□□□□ -0.38
HMGA1-206ENST00000478214 GDNFP39905 211 aa12.65□□□□□ -0.38
HMGA1-206ENST00000478214 DYNC1I2Q13409 638 aaKnown RBP12.65□□□□□ -0.38
HMGA1-206ENST00000478214 LDLRAD2Q5SZI1 272 aa12.65□□□□□ -0.38
HMGA1-206ENST00000478214 ZNF626Q68DY1 528 aa12.65□□□□□ -0.38
HMGA1-206ENST00000478214 BAIAP2L2Q6UXY1 529 aa12.65□□□□□ -0.38
HMGA1-206ENST00000478214 LINC00596Q86U02 117 aa12.65□□□□□ -0.38
HMGA1-206ENST00000478214 PHYHIPQ92561 330 aa12.65□□□□□ -0.38
HMGA1-206ENST00000478214 DYRK2Q92630 601 aa12.65□□□□□ -0.38
HMGA1-206ENST00000478214 UQCC2Q9BRT2 126 aa12.65□□□□□ -0.38
HMGA1-206ENST00000478214 BARHL1Q9BZE3 327 aa12.65□□□□□ -0.38
HMGA1-206ENST00000478214 MEGF9Q9H1U4 602 aa12.65□□□□□ -0.38
HMGA1-206ENST00000478214 BANF2Q9H503 90 aa12.65□□□□□ -0.38
HMGA1-206ENST00000478214 IFT22Q9H7X7 185 aa12.65□□□□□ -0.38
HMGA1-206ENST00000478214 ACOT13Q9NPJ3 140 aa12.65□□□□□ -0.38
HMGA1-206ENST00000478214 OR6C3Q9NZP0 311 aa12.65□□□□□ -0.38
HMGA1-206ENST00000478214 IGHV2-26A0A0B4J1V2 119 aa12.64□□□□□ -0.39
HMGA1-206ENST00000478214 BTBD17A6NE02 478 aa12.64□□□□□ -0.39
HMGA1-206ENST00000478214 FAM90A8PA6NJQ4 464 aa12.64□□□□□ -0.39
HMGA1-206ENST00000478214 CRYBA1P05813 215 aa12.64□□□□□ -0.39
HMGA1-206ENST00000478214 CFPP27918 469 aa12.64□□□□□ -0.39
HMGA1-206ENST00000478214 GLP1RP43220 463 aa12.64□□□□□ -0.39
HMGA1-206ENST00000478214 GABARAPL2P60520 117 aa12.64□□□□□ -0.39
HMGA1-206ENST00000478214 RELBQ01201 579 aa12.64□□□□□ -0.39
HMGA1-206ENST00000478214 EMX1Q04741 257 aaPredicted RBP12.64□□□□□ -0.39
HMGA1-206ENST00000478214 TRAM1Q15629 374 aa12.64□□□□□ -0.39
HMGA1-206ENST00000478214 C17orf58Q2M2W7 97 aa12.64□□□□□ -0.39
HMGA1-206ENST00000478214 MPV17LQ2QL34 196 aa12.64□□□□□ -0.39
HMGA1-206ENST00000478214 ATAD3CQ5T2N8 411 aa12.64□□□□□ -0.39
HMGA1-206ENST00000478214 RSBN1Q5VWQ0 802 aaPredicted RBP12.64□□□□□ -0.39
HMGA1-206ENST00000478214 BRICD5Q6PL45 260 aa12.64□□□□□ -0.39
HMGA1-206ENST00000478214 HEPN1Q6WQI6 88 aa12.64□□□□□ -0.39
HMGA1-206ENST00000478214 ZNF367Q7RTV3 350 aa12.64□□□□□ -0.39
HMGA1-206ENST00000478214 DYNAPQ8N1N2 210 aa12.64□□□□□ -0.39
HMGA1-206ENST00000478214 C3orf56Q8N813 242 aa12.64□□□□□ -0.39
HMGA1-206ENST00000478214 TMEM104Q8NE00 496 aa12.64□□□□□ -0.39
HMGA1-206ENST00000478214 OR13A1Q8NGR1 328 aa12.64□□□□□ -0.39
HMGA1-206ENST00000478214 MRPS24Q96EL2 167 aaKnown RBP12.64□□□□□ -0.39
HMGA1-206ENST00000478214 SSX3Q99909 188 aa12.64□□□□□ -0.39
HMGA1-206ENST00000478214 C1RLQ9NZP8 487 aa12.64□□□□□ -0.39
HMGA1-206ENST00000478214 VPREB3Q9UKI3 123 aa12.64□□□□□ -0.39
HMGA1-206ENST00000478214 KIAA2026Q5HYC2 2103 aa12.64□□□□□ -0.39
HMGA1-206ENST00000478214 TRAV39A0A0B4J263 110 aa12.63□□□□□ -0.39
HMGA1-206ENST00000478214 FAM172BPA6NC97 362 aa12.63□□□□□ -0.39
HMGA1-206ENST00000478214 ZNF729A6NN14 1252 aaPredicted RBP12.63□□□□□ -0.39
HMGA1-206ENST00000478214 H3BUX3 64 aa12.63□□□□□ -0.39
HMGA1-206ENST00000478214 CRTAPO75718 401 aaPredicted RBP12.63□□□□□ -0.39
HMGA1-206ENST00000478214 CGB3P0DN86 165 aa12.63□□□□□ -0.39
HMGA1-206ENST00000478214 CGB7P0DN87 165 aa12.63□□□□□ -0.39
HMGA1-206ENST00000478214 MGMTP16455 207 aa12.63□□□□□ -0.39
HMGA1-206ENST00000478214 MDKP21741 143 aaPredicted RBP12.63□□□□□ -0.39
HMGA1-206ENST00000478214 KCNJ3P48549 501 aa12.63□□□□□ -0.39
HMGA1-206ENST00000478214 FABP5Q01469 135 aa12.63□□□□□ -0.39
HMGA1-206ENST00000478214 PAX5Q02548 391 aa12.63□□□□□ -0.39
HMGA1-206ENST00000478214 SSX1Q16384 188 aa12.63□□□□□ -0.39
HMGA1-206ENST00000478214 LRRC75BQ2VPJ9 315 aa12.63□□□□□ -0.39
HMGA1-206ENST00000478214 GLT8D1Q68CQ7 371 aa12.63□□□□□ -0.39
HMGA1-206ENST00000478214 OR5R1Q8NH85 324 aa12.63□□□□□ -0.39
HMGA1-206ENST00000478214 FOXRED1Q96CU9 486 aaPredicted RBP12.63□□□□□ -0.39
HMGA1-206ENST00000478214 CLEC7AQ9BXN2 247 aa12.63□□□□□ -0.39
HMGA1-206ENST00000478214 SELENOIQ9C0D9 397 aa12.63□□□□□ -0.39
HMGA1-206ENST00000478214 NCOR1P1Q9H4R4 102 aa12.63□□□□□ -0.39
HMGA1-206ENST00000478214 TBL2Q9Y4P3 447 aaKnown RBP12.63□□□□□ -0.39
HMGA1-206ENST00000478214 KBTBD11-OT1A0A1B0GTJ5 212 aa12.62□□□□□ -0.39
HMGA1-206ENST00000478214 HAX1O00165 279 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms