RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 PLSCR3Q9NRY6 295 aa10.16□□□□□ -0.78
PRPF39-203ENST00000477626 ACACBO00763 2458 aa10.16□□□□□ -0.78
PRPF39-203ENST00000477626 SVILO95425 2214 aa10.16□□□□□ -0.78
PRPF39-203ENST00000477626 TRAPPC2LH3BP13 241 aa10.16□□□□□ -0.78
PRPF39-203ENST00000477626 C15orf65H3BRN8 121 aa10.16□□□□□ -0.78
PRPF39-203ENST00000477626 PRKACAP17612 351 aa10.16□□□□□ -0.78
PRPF39-203ENST00000477626 TESK1Q15569 626 aa10.16□□□□□ -0.78
PRPF39-203ENST00000477626 PRAMEF6Q5VXH4 476 aa10.16□□□□□ -0.78
PRPF39-203ENST00000477626 TGIF2LYQ8IUE0 185 aa10.16□□□□□ -0.78
PRPF39-203ENST00000477626 PHF21AQ96BD5 680 aa10.16□□□□□ -0.78
PRPF39-203ENST00000477626 C11orf1Q9H5F2 150 aa10.16□□□□□ -0.78
PRPF39-203ENST00000477626 GCM1Q9NP62 436 aa10.16□□□□□ -0.78
PRPF39-203ENST00000477626 PTAFRP25105 342 aa10.16□□□□□ -0.78
PRPF39-203ENST00000477626 IGSF11Q5DX21 431 aa10.16□□□□□ -0.78
PRPF39-203ENST00000477626 H1FOOQ8IZA3 346 aaPredicted RBP10.16□□□□□ -0.78
PRPF39-203ENST00000477626 GALNT14Q96FL9 552 aa10.16□□□□□ -0.78
PRPF39-203ENST00000477626 ST6GALNAC5Q9BVH7 336 aa10.16□□□□□ -0.78
PRPF39-203ENST00000477626 SCP2D1Q9UJQ7 156 aa10.16□□□□□ -0.78
PRPF39-203ENST00000477626 POLDIP2Q9Y2S7 368 aa10.16□□□□□ -0.78
PRPF39-203ENST00000477626 CSMD1Q96PZ7 3565 aa10.15□□□□□ -0.78
PRPF39-203ENST00000477626 CSTBP04080 98 aaKnown RBP10.15□□□□□ -0.78
PRPF39-203ENST00000477626 CTSDP07339 412 aaPredicted RBP10.15□□□□□ -0.78
PRPF39-203ENST00000477626 EIF2B2P49770 351 aaKnown RBP10.15□□□□□ -0.78
PRPF39-203ENST00000477626 STUMQ69YW2 141 aa10.15□□□□□ -0.78
PRPF39-203ENST00000477626 IGFBPL1Q8WX77 278 aa10.15□□□□□ -0.78
PRPF39-203ENST00000477626 BEX1Q9HBH7 125 aa10.15□□□□□ -0.78
PRPF39-203ENST00000477626 IFT46Q9NQC8 304 aa10.15□□□□□ -0.78
PRPF39-203ENST00000477626 UBE2QL1A1L167 161 aa10.15□□□□□ -0.78
PRPF39-203ENST00000477626 E7EQL1 145 aa10.15□□□□□ -0.78
PRPF39-203ENST00000477626 SFT2D2O95562 160 aa10.15□□□□□ -0.78
PRPF39-203ENST00000477626 FSTL3O95633 263 aa10.15□□□□□ -0.78
PRPF39-203ENST00000477626 SCTP09683 121 aa10.15□□□□□ -0.78
PRPF39-203ENST00000477626 MDH2P40926 338 aaKnown RBP10.15□□□□□ -0.78
PRPF39-203ENST00000477626 RND3P61587 244 aa10.15□□□□□ -0.78
PRPF39-203ENST00000477626 TMEM128Q5BJH2 165 aa10.15□□□□□ -0.78
PRPF39-203ENST00000477626 CMSS1Q9BQ75 279 aaKnown RBP10.15□□□□□ -0.78
PRPF39-203ENST00000477626 IL19Q9UHD0 177 aa10.15□□□□□ -0.78
PRPF39-203ENST00000477626 CELSR2Q9HCU4 2923 aa10.15□□□□□ -0.79
PRPF39-203ENST00000477626 TRDCB7Z8K6 153 aa10.15□□□□□ -0.79
PRPF39-203ENST00000477626 SDCBPO00560 298 aaPredicted RBP10.15□□□□□ -0.79
PRPF39-203ENST00000477626 CREBL2O60519 120 aaPredicted RBP10.15□□□□□ -0.79
PRPF39-203ENST00000477626 GNRHRP30968 328 aa10.15□□□□□ -0.79
PRPF39-203ENST00000477626 HOXC12P31275 282 aa10.15□□□□□ -0.79
PRPF39-203ENST00000477626 LGALSLQ3ZCW2 172 aaPredicted RBP10.15□□□□□ -0.79
PRPF39-203ENST00000477626 RNASE6Q93091 150 aaKnown RBP10.15□□□□□ -0.79
PRPF39-203ENST00000477626 CRYBG3Q68DQ2 2970 aa10.14□□□□□ -0.79
PRPF39-203ENST00000477626 IGKV1D-13A0A0B4J2D9 117 aa10.14□□□□□ -0.79
PRPF39-203ENST00000477626 IGKV1-13P0DP09 117 aa10.14□□□□□ -0.79
PRPF39-203ENST00000477626 SFTPCP11686 197 aa10.14□□□□□ -0.79
PRPF39-203ENST00000477626 CHRNB4P30926 498 aa10.14□□□□□ -0.79
PRPF39-203ENST00000477626 C11orf71Q6IPW1 123 aa10.14□□□□□ -0.79
PRPF39-203ENST00000477626 CLEC18BQ6UXF7 455 aa10.14□□□□□ -0.79
PRPF39-203ENST00000477626 UNQ6126/PRO20091Q6UXV3 157 aa10.14□□□□□ -0.79
PRPF39-203ENST00000477626 C18orf12Q96KH6 178 aa10.14□□□□□ -0.79
PRPF39-203ENST00000477626 MED28Q9H204 178 aa10.14□□□□□ -0.79
PRPF39-203ENST00000477626 RGS11O94810 467 aa10.14□□□□□ -0.79
PRPF39-203ENST00000477626 HEXAP06865 529 aa10.14□□□□□ -0.79
PRPF39-203ENST00000477626 NKAPLQ5M9Q1 402 aa10.14□□□□□ -0.79
PRPF39-203ENST00000477626 ZBTB8BQ8NAP8 495 aaPredicted RBP10.14□□□□□ -0.79
PRPF39-203ENST00000477626 UXS1Q8NBZ7 420 aa10.14□□□□□ -0.79
PRPF39-203ENST00000477626 OR5H2Q8NGV7 314 aa10.14□□□□□ -0.79
PRPF39-203ENST00000477626 ANGPTL6Q8NI99 470 aa10.14□□□□□ -0.79
PRPF39-203ENST00000477626 MSI2Q96DH6 328 aaKnown RBP10.14□□□□□ -0.79
PRPF39-203ENST00000477626 PPA2Q9H2U2 334 aa10.14□□□□□ -0.79
PRPF39-203ENST00000477626 SPACA1Q9HBV2 294 aa10.14□□□□□ -0.79
PRPF39-203ENST00000477626 NECAP2Q9NVZ3 263 aa10.14□□□□□ -0.79
PRPF39-203ENST00000477626 HAND1O96004 215 aa10.13□□□□□ -0.79
PRPF39-203ENST00000477626 TFF1P04155 84 aa10.13□□□□□ -0.79
PRPF39-203ENST00000477626 ECI1P42126 302 aa10.13□□□□□ -0.79
PRPF39-203ENST00000477626 FABP6P51161 128 aa10.13□□□□□ -0.79
PRPF39-203ENST00000477626 KLF3P57682 345 aaPredicted RBP10.13□□□□□ -0.79
PRPF39-203ENST00000477626 SEC61A1P61619 476 aaKnown RBP10.13□□□□□ -0.79
PRPF39-203ENST00000477626 SLC35E4Q6ICL7 350 aa10.13□□□□□ -0.79
PRPF39-203ENST00000477626 OR5H8P0DN80 308 aa10.13□□□□□ -0.79
PRPF39-203ENST00000477626 ANXA3P12429 323 aa10.13□□□□□ -0.79
PRPF39-203ENST00000477626 AGAP20933 346 aa10.13□□□□□ -0.79
PRPF39-203ENST00000477626 GLRA1P23415 457 aa10.13□□□□□ -0.79
PRPF39-203ENST00000477626 CEBPDP49716 269 aaPredicted RBP10.13□□□□□ -0.79
PRPF39-203ENST00000477626 SLC22A25Q6T423 547 aa10.13□□□□□ -0.79
PRPF39-203ENST00000477626 DMRTB1Q96MA1 342 aa10.13□□□□□ -0.79
PRPF39-203ENST00000477626 BBC3Q96PG8 261 aaPredicted RBP10.13□□□□□ -0.79
PRPF39-203ENST00000477626 S100A13Q99584 98 aa10.13□□□□□ -0.79
PRPF39-203ENST00000477626 RIMS4Q9H426 269 aaPredicted RBP10.13□□□□□ -0.79
PRPF39-203ENST00000477626 FAM221AA4D161 298 aa10.13□□□□□ -0.79
PRPF39-203ENST00000477626 EEF1E1-BLOC1S5C9J1V9 151 aa10.13□□□□□ -0.79
PRPF39-203ENST00000477626 OR7C1O76099 320 aaPredicted RBP10.13□□□□□ -0.79
PRPF39-203ENST00000477626 PSG2P11465 335 aa10.13□□□□□ -0.79
PRPF39-203ENST00000477626 CXCL2P19875 107 aa10.13□□□□□ -0.79
PRPF39-203ENST00000477626 DUSP1P28562 367 aa10.13□□□□□ -0.79
PRPF39-203ENST00000477626 NPY4RP50391 375 aa10.13□□□□□ -0.79
PRPF39-203ENST00000477626 RBPJQ06330 500 aa10.13□□□□□ -0.79
PRPF39-203ENST00000477626 TMEM187Q14656 261 aa10.13□□□□□ -0.79
PRPF39-203ENST00000477626 OR4A4PQ8NGN8 299 aa10.13□□□□□ -0.79
PRPF39-203ENST00000477626 SDSLQ96GA7 329 aa10.13□□□□□ -0.79
PRPF39-203ENST00000477626 NKIRAS2Q9NYR9 191 aa10.13□□□□□ -0.79
PRPF39-203ENST00000477626 EHFQ9NZC4 300 aa10.13□□□□□ -0.79
PRPF39-203ENST00000477626 CADP27708 2225 aa10.13□□□□□ -0.79
PRPF39-203ENST00000477626 CRYAAP02489 173 aa10.12□□□□□ -0.79
PRPF39-203ENST00000477626 RCC1P18754 421 aaPredicted RBP10.12□□□□□ -0.79
PRPF39-203ENST00000477626 ERP29P30040 261 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms