RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 ZNF880Q6PDB4 577 aa12.12□□□□□ -0.47
COL4A6-206ENST00000477085 Q6ZS49 121 aa12.12□□□□□ -0.47
COL4A6-206ENST00000477085 GAPTQ8N292 157 aa12.12□□□□□ -0.47
COL4A6-206ENST00000477085 ARRDC1Q8N5I2 433 aa12.12□□□□□ -0.47
COL4A6-206ENST00000477085 TERB2Q8NHR7 220 aa12.12□□□□□ -0.47
COL4A6-206ENST00000477085 CAPSLQ8WWF8 208 aa12.12□□□□□ -0.47
COL4A6-206ENST00000477085 HPS1Q92902 700 aa12.12□□□□□ -0.47
COL4A6-206ENST00000477085 DIRC2Q96SL1 478 aa12.12□□□□□ -0.47
COL4A6-206ENST00000477085 SEC22CQ9BRL7 303 aa12.12□□□□□ -0.47
COL4A6-206ENST00000477085 SHARPINQ9H0F6 387 aa12.12□□□□□ -0.47
COL4A6-206ENST00000477085 CHMP1AQ9HD42 196 aaPredicted RBP12.12□□□□□ -0.47
COL4A6-206ENST00000477085 PPP1R3CQ9UQK1 317 aa12.12□□□□□ -0.47
COL4A6-206ENST00000477085 WIPI2Q9Y4P8 454 aa12.12□□□□□ -0.47
COL4A6-206ENST00000477085 TRBV6-6A0A0A6YYG2 114 aa12.11□□□□□ -0.47
COL4A6-206ENST00000477085 B9A039 149 aa12.11□□□□□ -0.47
COL4A6-206ENST00000477085 H3BUI4 141 aa12.11□□□□□ -0.47
COL4A6-206ENST00000477085 RLN1P04808 185 aa12.11□□□□□ -0.47
COL4A6-206ENST00000477085 SCTP09683 121 aa12.11□□□□□ -0.47
COL4A6-206ENST00000477085 CD80P33681 288 aa12.11□□□□□ -0.47
COL4A6-206ENST00000477085 COL10A1Q03692 680 aa12.11□□□□□ -0.47
COL4A6-206ENST00000477085 RBM39Q14498 530 aaKnown RBP12.11□□□□□ -0.47
COL4A6-206ENST00000477085 ATXN7L3Q14CW9 347 aaPredicted RBP12.11□□□□□ -0.47
COL4A6-206ENST00000477085 SRSF7Q16629 238 aaKnown RBP eCLIP12.11□□□□□ -0.47
COL4A6-206ENST00000477085 IGSF11Q5DX21 431 aa12.11□□□□□ -0.47
COL4A6-206ENST00000477085 SHEQ5VZ18 495 aa12.11□□□□□ -0.47
COL4A6-206ENST00000477085 ZNF497Q6ZNH5 498 aa12.11□□□□□ -0.47
COL4A6-206ENST00000477085 OR52B4Q8NGK2 314 aa12.11□□□□□ -0.47
COL4A6-206ENST00000477085 MARCH1Q8TCQ1 289 aa12.11□□□□□ -0.47
COL4A6-206ENST00000477085 FAM222BQ8WU58 562 aa12.11□□□□□ -0.47
COL4A6-206ENST00000477085 TMPRSS13Q9BYE2 586 aa12.11□□□□□ -0.47
COL4A6-206ENST00000477085 RNF7Q9UBF6 113 aa12.11□□□□□ -0.47
COL4A6-206ENST00000477085 CACNA1DQ01668 2161 aa12.11□□□□□ -0.47
COL4A6-206ENST00000477085 IGKV1-6A0A0C4DH72 117 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 OR5H14A6NHG9 310 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 A8MV72 311 aaPredicted RBP12.1□□□□□ -0.47
COL4A6-206ENST00000477085 IFNL4K9M1U5 179 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 OR5H8P0DN80 308 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 OR3A1P47881 315 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 NPY4RP50391 375 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 ARPC4P59998 168 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 HERPUD1Q15011 391 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 FIP1L1Q6UN15 594 aaKnown RBP12.1□□□□□ -0.47
COL4A6-206ENST00000477085 GLDNQ6ZMI3 551 aaPredicted RBP12.1□□□□□ -0.47
COL4A6-206ENST00000477085 MUC15Q8N387 334 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 CCDC107Q8WV48 283 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 ERGIC1Q969X5 290 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 OR51J1Q9H342 316 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 ZNF286AQ9HBT8 521 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 ZNF222Q9UK12 451 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 DCHS2Q6V1P9 2916 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 ZNF462Q96JM2 2506 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 CEACAM18A8MTB9 384 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 ZNF737O75373 536 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 IL5P05113 134 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 TSPAN5P62079 268 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 CBX3Q13185 183 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 ZMYND11Q15326 602 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 GRK1Q15835 563 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 FAM209AQ5JX71 171 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 DHRS11Q6UWP2 260 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 AKAP14Q86UN6 197 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 FAM90A1Q86YD7 464 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 ADAD2Q8NCV1 583 aaKnown RBP12.1□□□□□ -0.47
COL4A6-206ENST00000477085 OR6F1Q8NGZ6 308 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 ANGPTL6Q8NI99 470 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 COQ2Q96H96 371 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 ST6GAL2Q96JF0 529 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 RIMS4Q9H426 269 aaPredicted RBP12.1□□□□□ -0.47
COL4A6-206ENST00000477085 GLS2Q9UI32 602 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 NPTNQ9Y639 398 aa12.1□□□□□ -0.47
COL4A6-206ENST00000477085 TRDCB7Z8K6 153 aa12.09□□□□□ -0.47
COL4A6-206ENST00000477085 CD8AP01732 235 aa12.09□□□□□ -0.47
COL4A6-206ENST00000477085 TNFRSF1AP19438 455 aa12.09□□□□□ -0.47
COL4A6-206ENST00000477085 RRAS2P62070 204 aaPredicted RBP12.09□□□□□ -0.47
COL4A6-206ENST00000477085 AESQ08117 197 aa12.09□□□□□ -0.47
COL4A6-206ENST00000477085 TESK1Q15569 626 aa12.09□□□□□ -0.47
COL4A6-206ENST00000477085 TMED4Q7Z7H5 227 aa12.09□□□□□ -0.47
COL4A6-206ENST00000477085 MED30Q96HR3 178 aa12.09□□□□□ -0.47
COL4A6-206ENST00000477085 ZNF2Q9BSG1 426 aaPredicted RBP12.09□□□□□ -0.47
COL4A6-206ENST00000477085 ALX4Q9H161 411 aaPredicted RBP12.09□□□□□ -0.47
COL4A6-206ENST00000477085 MS4A5Q9H3V2 200 aa12.09□□□□□ -0.47
COL4A6-206ENST00000477085 SAP30LQ9HAJ7 183 aa12.09□□□□□ -0.47
COL4A6-206ENST00000477085 SEBOXQ9HB31 216 aaPredicted RBP12.09□□□□□ -0.47
COL4A6-206ENST00000477085 DYNLRB1Q9NP97 96 aa12.09□□□□□ -0.47
COL4A6-206ENST00000477085 NECAP2Q9NVZ3 263 aa12.09□□□□□ -0.47
COL4A6-206ENST00000477085 GPR132Q9UNW8 380 aa12.09□□□□□ -0.47
COL4A6-206ENST00000477085 MAB21L2Q9Y586 359 aa12.09□□□□□ -0.47
COL4A6-206ENST00000477085 A0A1B0GW55 424 aa12.08□□□□□ -0.48
COL4A6-206ENST00000477085 DUX4L2P0CJ85 424 aa12.08□□□□□ -0.48
COL4A6-206ENST00000477085 DUX4L3P0CJ86 424 aa12.08□□□□□ -0.48
COL4A6-206ENST00000477085 DUX4L4P0CJ87 422 aa12.08□□□□□ -0.48
COL4A6-206ENST00000477085 DUX4L5P0CJ88 424 aa12.08□□□□□ -0.48
COL4A6-206ENST00000477085 DUX4L6P0CJ89 424 aa12.08□□□□□ -0.48
COL4A6-206ENST00000477085 DUX4L7P0CJ90 424 aa12.08□□□□□ -0.48
COL4A6-206ENST00000477085 MDH2P40926 338 aaKnown RBP12.08□□□□□ -0.48
COL4A6-206ENST00000477085 BAMBIQ13145 260 aa12.08□□□□□ -0.48
COL4A6-206ENST00000477085 FCN2Q15485 313 aa12.08□□□□□ -0.48
COL4A6-206ENST00000477085 DUX4L9Q6RFH8 374 aaPredicted RBP12.08□□□□□ -0.48
COL4A6-206ENST00000477085 PEG10Q86TG7 708 aaKnown RBP12.08□□□□□ -0.48
COL4A6-206ENST00000477085 ZDHHC22Q8N966 263 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms