RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 OR51E1Q8TCB6 317 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 PTPMT1Q8WUK0 201 aaPredicted RBP9.18□□□□□ -0.94
ABCF1-205ENST00000475993 PLEKHF2Q9H8W4 249 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 TBC1D29Q9UFV1 150 aa9.18□□□□□ -0.94
ABCF1-205ENST00000475993 MCTS1Q9ULC4 181 aaKnown RBP9.18□□□□□ -0.94
ABCF1-205ENST00000475993 HTTP42858 3142 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 HIST1H3AP68431 136 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 FMODQ06828 376 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 PRDX4Q13162 271 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 CST9LP1Q5W188 147 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 KLHL24Q6TFL4 600 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 CENPVQ7Z7K6 275 aaPredicted RBP9.17□□□□□ -0.94
ABCF1-205ENST00000475993 LGI3Q8N145 548 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 TMEM234Q8WY98 164 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 SLAMF6Q96DU3 332 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 VAMP8Q9BV40 100 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 PLSCR4Q9NRQ2 329 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 OR6C3Q9NZP0 311 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 USP34Q70CQ2 3546 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 MANSC4A6NHS7 340 aaPredicted RBP9.17□□□□□ -0.94
ABCF1-205ENST00000475993 PROB1E7EW31 1015 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 K7ERU9 68 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 PLPP3O14495 311 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 PRKNO60260 465 aaPredicted RBP9.17□□□□□ -0.94
ABCF1-205ENST00000475993 WISP1O95388 367 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 ACRP10323 421 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 SEC13P55735 322 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 RUNX1Q01196 453 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 FUT7Q11130 342 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 TMEM183BQ1AE95 376 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 ACOT6Q3I5F7 207 aaPredicted RBP9.17□□□□□ -0.94
ABCF1-205ENST00000475993 TSPO2Q5TGU0 170 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 SFTPA1Q8IWL2 248 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 TMEM252Q8N6L7 170 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 OR5C1Q8NGR4 320 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 MOB3AQ96BX8 217 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 P2RX4Q99571 388 aa9.17□□□□□ -0.94
ABCF1-205ENST00000475993 LYRM2Q9NU23 88 aaPredicted RBP9.17□□□□□ -0.94
ABCF1-205ENST00000475993 PCNX3Q9H6A9 2034 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 IGHV2OR16-5A0A0B4J2B6 119 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 UTS2O95399 124 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 ZNF728P0DKX0 622 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 PSG1P11464 419 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 ZNF17P17021 662 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 OMGP23515 440 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 RANP62826 216 aaKnown RBP9.16□□□□□ -0.94
ABCF1-205ENST00000475993 PRSS8Q16651 343 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 CLEC12BQ2HXU8 276 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 MPV17LQ2QL34 196 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 ABCA11PQ4W5N1 156 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 KRTCAP3Q53RY4 240 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 C16orf82Q7Z2V1 217 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 ODF3L1Q8IXM7 274 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 OR10S1Q8NGN2 331 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 ZNF596Q8TC21 504 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 KCNE4Q8WWG9 221 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 ZCCHC14Q8WYQ9 949 aaKnown RBP9.16□□□□□ -0.94
ABCF1-205ENST00000475993 ELSPBP1Q96BH3 223 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 GPER1Q99527 375 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 TM2D1Q9BX74 207 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 ANXA10Q9UJ72 324 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 PHF3Q92576 2039 aaKnown RBP9.16□□□□□ -0.94
ABCF1-205ENST00000475993 IGKV1D-43A0A0B4J1Z2 117 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 TRAV34A0A0B4J273 112 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 VSTM2BA6NLU5 285 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 MSTNO14793 375 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 NPIPB7O75200 414 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 VIPR2P41587 438 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 SLC6A8P48029 635 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 HINT1P49773 126 aaPredicted RBP9.16□□□□□ -0.94
ABCF1-205ENST00000475993 ERVS71-1P61550 626 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 IGLV3-21P80748 117 aaPredicted RBP9.16□□□□□ -0.94
ABCF1-205ENST00000475993 DNM1P34Q6PK57 102 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 C1QL2Q7Z5L3 287 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 STXBP6Q8NFX7 210 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 APH1AQ96BI3 265 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 FAM71F1Q96KD3 344 aaPredicted RBP9.16□□□□□ -0.94
ABCF1-205ENST00000475993 FUT9Q9Y231 359 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 ST3GAL6Q9Y274 331 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 LAMTOR2Q9Y2Q5 125 aa9.16□□□□□ -0.94
ABCF1-205ENST00000475993 IGKV1-9A0A0C4DH69 117 aa9.15□□□□□ -0.94
ABCF1-205ENST00000475993 MMP23AO75900 390 aa9.15□□□□□ -0.94
ABCF1-205ENST00000475993 CLPSP04118 112 aa9.15□□□□□ -0.94
ABCF1-205ENST00000475993 HLA-DOBP13765 273 aa9.15□□□□□ -0.94
ABCF1-205ENST00000475993 PVRP15151 417 aa9.15□□□□□ -0.94
ABCF1-205ENST00000475993 CTSSP25774 331 aa9.15□□□□□ -0.94
ABCF1-205ENST00000475993 MTCP1P56278 107 aa9.15□□□□□ -0.94
ABCF1-205ENST00000475993 CRIP3Q6Q6R5 217 aa9.15□□□□□ -0.94
ABCF1-205ENST00000475993 RTN4RQ9BZR6 473 aa9.15□□□□□ -0.94
ABCF1-205ENST00000475993 STARD5Q9NSY2 213 aa9.15□□□□□ -0.94
ABCF1-205ENST00000475993 ZFP92A6NM28 416 aa9.15□□□□□ -0.94
ABCF1-205ENST00000475993 CDS2O95674 445 aa9.15□□□□□ -0.94
ABCF1-205ENST00000475993 GLI4P10075 376 aa9.15□□□□□ -0.94
ABCF1-205ENST00000475993 ZNF16P17020 682 aaPredicted RBP9.15□□□□□ -0.94
ABCF1-205ENST00000475993 DYNLT3P51808 116 aa9.15□□□□□ -0.94
ABCF1-205ENST00000475993 TAS2R30P59541 319 aa9.15□□□□□ -0.94
ABCF1-205ENST00000475993 ZNF709Q8N972 641 aa9.15□□□□□ -0.94
ABCF1-205ENST00000475993 SLC38A9Q8NBW4 561 aa9.15□□□□□ -0.94
ABCF1-205ENST00000475993 NECAP1Q8NC96 275 aa9.15□□□□□ -0.94
ABCF1-205ENST00000475993 ST6GALNAC3Q8NDV1 305 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms