RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 RPL36A-HNRNPH2H7BZ11 118 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 K7EM74 188 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 SS18L1O75177 396 aaPredicted RBP5.9□□□□□ -1.46
UBR4-212ENST00000475973 CEACAM4O75871 244 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 FARS2O95363 451 aaKnown RBP5.9□□□□□ -1.46
UBR4-212ENST00000475973 IGKV1D-12P01611 117 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 HCKP08631 526 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 HOXB5P09067 269 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 OR8U8P0C7N1 319 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 OR5H8P0DN80 308 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 SLC2A1P11166 492 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 CSNK1A1P48729 337 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 GUK1Q16774 197 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 CHRFAM7AQ494W8 412 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 HIKESHIQ53FT3 197 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 ANKRD39Q53RE8 183 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 DCAF10Q5QP82 559 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 RIPPLY2Q5TAB7 128 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 LCN10Q6JVE6 187 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 HEPN1Q6WQI6 88 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 Q6ZS46 218 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 C6orf201Q7Z4U5 140 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 FAM185AQ8N0U4 392 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 FBXL14Q8N1E6 418 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 GPR137CQ8N3F9 429 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 BOLLQ8N9W6 283 aaKnown RBP5.9□□□□□ -1.46
UBR4-212ENST00000475973 FDCSPQ8NFU4 85 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 OR1J1Q8NGS3 322 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 SLC22A8Q8TCC7 542 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 SECTM1Q8WVN6 248 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 IL22RA2Q969J5 263 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 FBXO17Q96EF6 278 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 PGAM5Q96HS1 289 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 BOD1Q96IK1 185 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 TECTBQ96PL2 329 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 SIGLEC12Q96PQ1 595 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 CLCC1Q96S66 551 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 ZNF251Q9BRH9 671 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 TCEAL7Q9BRU2 100 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 ST6GALNAC5Q9BVH7 336 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 OR51M1Q9H341 326 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 RGCCQ9H4X1 137 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 ZNF160Q9HCG1 818 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 NECAP2Q9NVZ3 263 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 AK3Q9UIJ7 227 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 RCL1Q9Y2P8 373 aaKnown RBP5.9□□□□□ -1.46
UBR4-212ENST00000475973 MRPS18CQ9Y3D5 142 aaKnown RBP5.9□□□□□ -1.46
UBR4-212ENST00000475973 BOD1L1Q8NFC6 3051 aa5.9□□□□□ -1.47
UBR4-212ENST00000475973 HELZ2Q9BYK8 2649 aaKnown RBP5.89□□□□□ -1.47
UBR4-212ENST00000475973 COL6A6A6NMZ7 2263 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 hCG_38984A0A1B0GV85 526 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 A0A1W2PPE3 182 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 OR5H15A6NDH6 313 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 CXorf65A6NEN9 183 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 ZNF716A6NP11 495 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 UMAD1C9J7I0 102 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 H3BML4 177 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 M0R135 149 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 PHOX2AO14813 284 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 SMAD9O15198 467 aaKnown RBP5.89□□□□□ -1.47
UBR4-212ENST00000475973 ST8SIA3O43173 380 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 PITX3O75364 302 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 KLF7O75840 302 aaPredicted RBP5.89□□□□□ -1.47
UBR4-212ENST00000475973 WISP2O76076 250 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 AGFG2O95081 481 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 NAPSAO96009 420 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 IFNA21P01568 189 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 IGHV2-70P01814 119 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 SLC25A6P12236 298 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 FCGR2AP12318 317 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 PAX1P15863 534 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 FAHP16930 419 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 RAB5AP20339 215 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 HOXA5P20719 270 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 DUSP1P28562 367 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 RPL35P42766 123 aaKnown RBP5.89□□□□□ -1.47
UBR4-212ENST00000475973 GLP1RP43220 463 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 NPBWR2P48146 333 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 DSCR4P56555 118 aaPredicted RBP5.89□□□□□ -1.47
UBR4-212ENST00000475973 PIGPP57054 158 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 SNRPEP62304 92 aaKnown RBP5.89□□□□□ -1.47
UBR4-212ENST00000475973 SRPXP78539 464 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 RAB35Q15286 201 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 EIF2S3LQ2VIR3 472 aaKnown RBP5.89□□□□□ -1.47
UBR4-212ENST00000475973 SNAI3Q3KNW1 292 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 AWAT1Q58HT5 328 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 NMSQ5H8A3 153 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 FAM76BQ5HYJ3 339 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 FAM69BQ5VUD6 431 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 ABLIM2Q6H8Q1 611 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 ZNF880Q6PDB4 577 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 LHFPL2Q6ZUX7 228 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 SAXO1Q8IYX7 474 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 LGI3Q8N145 548 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 PLPPR1Q8TBJ4 325 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 RTN4IP1Q8WWV3 396 aaPredicted RBP5.89□□□□□ -1.47
UBR4-212ENST00000475973 MUCL1Q96DR8 90 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 CPNE2Q96FN4 548 aaPredicted RBP5.89□□□□□ -1.47
UBR4-212ENST00000475973 ZNF799Q96GE5 643 aa5.89□□□□□ -1.47
UBR4-212ENST00000475973 AKR1E2Q96JD6 320 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms