RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 RHOFQ9HBH0 211 aa3.26□□□□□ -1.89
SDHB-205ENST00000475506 NUP153P49790 1475 aaKnown RBP3.26□□□□□ -1.89
SDHB-205ENST00000475506 GRIN2AQ12879 1464 aa3.26□□□□□ -1.89
SDHB-205ENST00000475506 TEX14Q8IWB6 1497 aa3.26□□□□□ -1.89
SDHB-205ENST00000475506 PIK3C2GO75747 1445 aa3.26□□□□□ -1.89
SDHB-205ENST00000475506 UHRF1BP1Q6BDS2 1440 aa3.26□□□□□ -1.89
SDHB-205ENST00000475506 PPIP5K1Q6PFW1 1433 aa3.26□□□□□ -1.89
SDHB-205ENST00000475506 PLXNB3Q9ULL4 1909 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 COL27A1Q8IZC6 1860 aaPredicted RBP3.25□□□□□ -1.89
SDHB-205ENST00000475506 ERCC6Q03468 1493 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 A0A1W2PRG6 482 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 A8MWL6 223 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 C8orf87E5RJ46 101 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 BIRC5O15392 142 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 COCHO43405 550 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 CYTH3O43739 400 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 WISP3O95389 354 aaPredicted RBP3.25□□□□□ -1.89
SDHB-205ENST00000475506 CA2P00918 260 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 CECR9P0C854 216 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 S100A1P23297 94 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 STC1P52823 247 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 EMP2P54851 167 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 GLYATQ6IB77 296 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 C10orf107Q8IVU9 208 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 BLIDQ8IZY5 108 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 OSR2Q8N2R0 312 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 GATD1Q8NB37 220 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 OR6K3Q8NGY3 331 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 OR52N1Q8NH53 320 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 YIPF6Q96EC8 236 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 RNF157Q96PX1 679 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 FAAP24Q9BTP7 215 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 ING2Q9H160 280 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 TMEM38BQ9NVV0 291 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 UBAP1Q9NZ09 502 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 RWDD2AQ9UIY3 292 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 ANKRD50Q9ULJ7 1429 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 RTL1A6NKG5 1358 aa3.25□□□□□ -1.89
SDHB-205ENST00000475506 ARHGEF12Q9NZN5 1544 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 SNAPC4Q5SXM2 1469 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 PGPA6NDG6 321 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 COLCA2A8K830 154 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 GPR171O14626 319 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 BET1O15155 118 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 SYNGR1O43759 233 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 COX7A2P2O60397 106 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 ATP6V1G2O95670 118 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 EPPINO95925 133 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 LHBP01229 141 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 OCMP0CE72 109 aaPredicted RBP3.24□□□□□ -1.89
SDHB-205ENST00000475506 SPNP16150 400 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 IMPA1P29218 277 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 RHOAP61586 193 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 ATP5G2Q06055 141 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 EIF4EBP1Q13541 118 aaPredicted RBP3.24□□□□□ -1.89
SDHB-205ENST00000475506 MOBPQ13875 183 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 CCDC153Q494R4 210 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 MED27Q6P2C8 311 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 ZNF880Q6PDB4 577 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 ZNF773Q6PK81 442 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 UNQ9165/PRO28630Q6UXU0 137 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 DGAT2L6Q6ZPD8 337 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 PLEKHG7Q6ZR37 379 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 MARCH3Q86UD3 253 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 ZDHHC22Q8N966 263 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 ZIC4Q8N9L1 334 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 LFNGQ8NES3 379 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 ATP6V1C2Q8NEY4 427 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 ARL5BQ96KC2 179 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 SDHCQ99643 169 aaPredicted RBP3.24□□□□□ -1.89
SDHB-205ENST00000475506 APOL4Q9BPW4 351 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 ZNF426Q9BUY5 554 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 PARVBQ9HBI1 364 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 PSMD13Q9UNM6 376 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 ZNF780BQ9Y6R6 833 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 CASKIN1Q8WXD9 1431 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 SUPT6HQ7KZ85 1726 aaKnown RBP3.24□□□□□ -1.89
SDHB-205ENST00000475506 POLR3AO14802 1390 aaPredicted RBP3.24□□□□□ -1.89
SDHB-205ENST00000475506 PRDM15P57071 1507 aaPredicted RBP3.24□□□□□ -1.89
SDHB-205ENST00000475506 EHBP1L1Q8N3D4 1523 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 ABCA10Q8WWZ4 1543 aa3.24□□□□□ -1.89
SDHB-205ENST00000475506 TOP2BQ02880 1626 aa3.23□□□□□ -1.89
SDHB-205ENST00000475506 TRAV8-3A0A0A6YYJ7 113 aa3.23□□□□□ -1.89
SDHB-205ENST00000475506 FAM183AA6NL82 134 aa3.23□□□□□ -1.89
SDHB-205ENST00000475506 RGS12O14924 1447 aa3.23□□□□□ -1.89
SDHB-205ENST00000475506 OR7C2O60412 319 aa3.23□□□□□ -1.89
SDHB-205ENST00000475506 STX10O60499 249 aa3.23□□□□□ -1.89
SDHB-205ENST00000475506 ORM1P02763 201 aa3.23□□□□□ -1.89
SDHB-205ENST00000475506 PET100P0DJ07 73 aa3.23□□□□□ -1.89
SDHB-205ENST00000475506 SLC2A1P11166 492 aa3.23□□□□□ -1.89
SDHB-205ENST00000475506 RPL14P50914 215 aaKnown RBP3.23□□□□□ -1.89
SDHB-205ENST00000475506 RAB8AP61006 207 aa3.23□□□□□ -1.89
SDHB-205ENST00000475506 DYNLL1P63167 89 aaKnown RBP3.23□□□□□ -1.89
SDHB-205ENST00000475506 NDUFA5Q16718 116 aa3.23□□□□□ -1.89
SDHB-205ENST00000475506 TMEM241Q24JQ0 296 aa3.23□□□□□ -1.89
SDHB-205ENST00000475506 UBE2NLQ5JXB2 153 aa3.23□□□□□ -1.89
SDHB-205ENST00000475506 SSH2Q76I76 1423 aa3.23□□□□□ -1.89
SDHB-205ENST00000475506 MIR7-3HGQ8N6C7 128 aa3.23□□□□□ -1.89
SDHB-205ENST00000475506 OR5H2Q8NGV7 314 aa3.23□□□□□ -1.89
SDHB-205ENST00000475506 DNAJB3Q8WWF6 145 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms