RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 IFITM3Q01628 133 aa13□□□□□ -0.33
CPSF3-203ENST00000475482 PAX2Q02962 417 aa13□□□□□ -0.33
CPSF3-203ENST00000475482 ZNF154Q13106 437 aa13□□□□□ -0.33
CPSF3-203ENST00000475482 ASAH1Q13510 395 aa13□□□□□ -0.33
CPSF3-203ENST00000475482 MPV17LQ2QL34 196 aa13□□□□□ -0.33
CPSF3-203ENST00000475482 CDNFQ49AH0 187 aa13□□□□□ -0.33
CPSF3-203ENST00000475482 Q6ZTK2 550 aa13□□□□□ -0.33
CPSF3-203ENST00000475482 MOGAT3Q86VF5 341 aa13□□□□□ -0.33
CPSF3-203ENST00000475482 TOMM5Q8N4H5 51 aa13□□□□□ -0.33
CPSF3-203ENST00000475482 DACT3Q96B18 629 aaPredicted RBP13□□□□□ -0.33
CPSF3-203ENST00000475482 C7orf50Q9BRJ6 194 aaKnown RBP13□□□□□ -0.33
CPSF3-203ENST00000475482 NICN1Q9BSH3 213 aa13□□□□□ -0.33
CPSF3-203ENST00000475482 TLNRD1Q9H1K6 362 aa13□□□□□ -0.33
CPSF3-203ENST00000475482 SPACA1Q9HBV2 294 aa13□□□□□ -0.33
CPSF3-203ENST00000475482 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13□□□□□ -0.33
CPSF3-203ENST00000475482 MTCH1Q9NZJ7 389 aa13□□□□□ -0.33
CPSF3-203ENST00000475482 GLS2Q9UI32 602 aa13□□□□□ -0.33
CPSF3-203ENST00000475482 HSF4Q9ULV5 492 aa13□□□□□ -0.33
CPSF3-203ENST00000475482 ANK2Q01484 3957 aa12.99□□□□□ -0.33
CPSF3-203ENST00000475482 SYNGR1O43759 233 aa12.99□□□□□ -0.33
CPSF3-203ENST00000475482 NOS1APO75052 506 aaPredicted RBP12.99□□□□□ -0.33
CPSF3-203ENST00000475482 CA11O75493 328 aa12.99□□□□□ -0.33
CPSF3-203ENST00000475482 SFTPBP07988 381 aa12.99□□□□□ -0.33
CPSF3-203ENST00000475482 CSF1P09603 554 aa12.99□□□□□ -0.33
CPSF3-203ENST00000475482 HIST1H1DP16402 221 aaKnown RBP12.99□□□□□ -0.33
CPSF3-203ENST00000475482 BCL3P20749 454 aa12.99□□□□□ -0.33
CPSF3-203ENST00000475482 GABRR1P24046 479 aa12.99□□□□□ -0.33
CPSF3-203ENST00000475482 CBX5P45973 191 aa12.99□□□□□ -0.33
CPSF3-203ENST00000475482 GNG2P59768 71 aa12.99□□□□□ -0.33
CPSF3-203ENST00000475482 MRPS15P82914 257 aaKnown RBP12.99□□□□□ -0.33
CPSF3-203ENST00000475482 DGCR2P98153 550 aa12.99□□□□□ -0.33
CPSF3-203ENST00000475482 IL13RA2Q14627 380 aa12.99□□□□□ -0.33
CPSF3-203ENST00000475482 TRIM16LQ309B1 348 aa12.99□□□□□ -0.33
CPSF3-203ENST00000475482 ZNF260Q3ZCT1 412 aa12.99□□□□□ -0.33
CPSF3-203ENST00000475482 C1orf87Q8N0U7 546 aa12.99□□□□□ -0.33
CPSF3-203ENST00000475482 FAM58AQ8N1B3 248 aa12.99□□□□□ -0.33
CPSF3-203ENST00000475482 OR52I2Q8NH67 350 aa12.99□□□□□ -0.33
CPSF3-203ENST00000475482 NANPQ8TBE9 248 aa12.99□□□□□ -0.33
CPSF3-203ENST00000475482 TMEM246Q9BRR3 403 aa12.99□□□□□ -0.33
CPSF3-203ENST00000475482 OCEL1Q9H607 264 aa12.99□□□□□ -0.33
CPSF3-203ENST00000475482 FN3KRPQ9HA64 309 aa12.99□□□□□ -0.33
CPSF3-203ENST00000475482 PLEKHJ1Q9NW61 149 aa12.99□□□□□ -0.33
CPSF3-203ENST00000475482 INSIG2Q9Y5U4 225 aa12.99□□□□□ -0.33
CPSF3-203ENST00000475482 IGHV3-64DA0A0J9YX35 117 aa12.98□□□□□ -0.33
CPSF3-203ENST00000475482 LRRC30A6NM36 301 aa12.98□□□□□ -0.33
CPSF3-203ENST00000475482 CDIPTO14735 213 aa12.98□□□□□ -0.33
CPSF3-203ENST00000475482 SOCS1O15524 211 aa12.98□□□□□ -0.33
CPSF3-203ENST00000475482 CD3GP09693 182 aa12.98□□□□□ -0.33
CPSF3-203ENST00000475482 PRKACAP17612 351 aa12.98□□□□□ -0.33
CPSF3-203ENST00000475482 FAUP35544 74 aaKnown RBP12.98□□□□□ -0.33
CPSF3-203ENST00000475482 GDNFP39905 211 aa12.98□□□□□ -0.33
CPSF3-203ENST00000475482 NPBWR2P48146 333 aa12.98□□□□□ -0.33
CPSF3-203ENST00000475482 HILS1P60008 231 aa12.98□□□□□ -0.33
CPSF3-203ENST00000475482 DYRK1AQ13627 763 aa12.98□□□□□ -0.33
CPSF3-203ENST00000475482 MPPED2Q15777 294 aa12.98□□□□□ -0.33
CPSF3-203ENST00000475482 MOGAT2Q3SYC2 334 aa12.98□□□□□ -0.33
CPSF3-203ENST00000475482 WDR86Q86TI4 376 aa12.98□□□□□ -0.33
CPSF3-203ENST00000475482 POC1AQ8NBT0 407 aa12.98□□□□□ -0.33
CPSF3-203ENST00000475482 OR10Z1Q8NGY1 313 aa12.98□□□□□ -0.33
CPSF3-203ENST00000475482 EMG1Q92979 244 aaKnown RBP12.98□□□□□ -0.33
CPSF3-203ENST00000475482 TRIM63Q969Q1 353 aa12.98□□□□□ -0.33
CPSF3-203ENST00000475482 RASL12Q9NYN1 266 aa12.98□□□□□ -0.33
CPSF3-203ENST00000475482 MTFP1Q9UDX5 166 aa12.98□□□□□ -0.33
CPSF3-203ENST00000475482 ZNF107Q9UII5 783 aaPredicted RBP12.98□□□□□ -0.33
CPSF3-203ENST00000475482 RBMX2Q9Y388 322 aaKnown RBP12.98□□□□□ -0.33
CPSF3-203ENST00000475482 A0A0A6YYD4 124 aa12.97□□□□□ -0.33
CPSF3-203ENST00000475482 hCG_1807616A0A1W2PRN6 198 aa12.97□□□□□ -0.33
CPSF3-203ENST00000475482 MFNGO00587 321 aa12.97□□□□□ -0.33
CPSF3-203ENST00000475482 ORC5O43913 435 aa12.97□□□□□ -0.33
CPSF3-203ENST00000475482 PDCD6O75340 191 aa12.97□□□□□ -0.33
CPSF3-203ENST00000475482 NXPH2O95156 264 aa12.97□□□□□ -0.33
CPSF3-203ENST00000475482 ZNF205O95201 554 aa12.97□□□□□ -0.33
CPSF3-203ENST00000475482 PGA5P0DJD9 388 aa12.97□□□□□ -0.33
CPSF3-203ENST00000475482 GNB3P16520 340 aa12.97□□□□□ -0.33
CPSF3-203ENST00000475482 FUT3P21217 361 aa12.97□□□□□ -0.33
CPSF3-203ENST00000475482 CFHR2P36980 270 aa12.97□□□□□ -0.33
CPSF3-203ENST00000475482 PAX8Q06710 450 aa12.97□□□□□ -0.33
CPSF3-203ENST00000475482 ARFRP1Q13795 201 aa12.97□□□□□ -0.33
CPSF3-203ENST00000475482 TAF9Q16594 264 aa12.97□□□□□ -0.33
CPSF3-203ENST00000475482 ESCO2Q56NI9 601 aa12.97□□□□□ -0.33
CPSF3-203ENST00000475482 SPIN3Q5JUX0 258 aa12.97□□□□□ -0.33
CPSF3-203ENST00000475482 FAM201AQ5SY85 155 aa12.97□□□□□ -0.33
CPSF3-203ENST00000475482 GPX8Q8TED1 209 aa12.97□□□□□ -0.33
CPSF3-203ENST00000475482 ZNF418Q8TF45 676 aaPredicted RBP12.97□□□□□ -0.33
CPSF3-203ENST00000475482 CHPT1Q8WUD6 406 aa12.97□□□□□ -0.33
CPSF3-203ENST00000475482 ARHGAP5-AS1Q96IT6 56 aa12.97□□□□□ -0.33
CPSF3-203ENST00000475482 NRIP2Q9BQI9 281 aa12.97□□□□□ -0.33
CPSF3-203ENST00000475482 PECRQ9BY49 303 aa12.97□□□□□ -0.33
CPSF3-203ENST00000475482 IFT46Q9NQC8 304 aa12.97□□□□□ -0.33
CPSF3-203ENST00000475482 RBFOX1Q9NWB1 397 aaKnown RBP12.97□□□□□ -0.33
CPSF3-203ENST00000475482 MIOXQ9UGB7 285 aa12.97□□□□□ -0.33
CPSF3-203ENST00000475482 PPIAL4AQ9Y536 164 aa12.97□□□□□ -0.33
CPSF3-203ENST00000475482 TENM1Q9UKZ4 2725 aa12.96□□□□□ -0.33
CPSF3-203ENST00000475482 TMEM235A6NFC5 223 aa12.96□□□□□ -0.33
CPSF3-203ENST00000475482 NAP1L6A6NFF2 107 aa12.96□□□□□ -0.33
CPSF3-203ENST00000475482 FOXI3A8MTJ6 420 aaPredicted RBP12.96□□□□□ -0.33
CPSF3-203ENST00000475482 TNFRSF13BO14836 293 aaPredicted RBP12.96□□□□□ -0.33
CPSF3-203ENST00000475482 GEMIN2O14893 280 aaKnown RBP12.96□□□□□ -0.33
CPSF3-203ENST00000475482 LYRM1O43325 122 aa12.96□□□□□ -0.33
CPSF3-203ENST00000475482 RHBDL1O75783 438 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms